Protein–RNA interactions for Protein: P50416

CPT1A, Carnitine O-palmitoyltransferase 1, liver isoform, humanhuman

Predictions only

Length 773 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPT1AP50416 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC24.9■■□□□ 1.58
CPT1AP50416 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC24.9■■□□□ 1.58
CPT1AP50416 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
CPT1AP50416 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC24.9■■□□□ 1.58
CPT1AP50416 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
CPT1AP50416 MED17-227ENST00000640521 2047 ntTSL 5 BASIC24.9■■□□□ 1.58
CPT1AP50416 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC24.89■■□□□ 1.58
CPT1AP50416 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC24.89■■□□□ 1.58
CPT1AP50416 NTF6G-201ENST00000591094 616 ntBASIC24.89■■□□□ 1.58
CPT1AP50416 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC24.89■■□□□ 1.58
CPT1AP50416 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC24.89■■□□□ 1.57
CPT1AP50416 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC24.89■■□□□ 1.57
CPT1AP50416 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC24.89■■□□□ 1.57
CPT1AP50416 EED-207ENST00000528180 1745 ntTSL 5 BASIC24.89■■□□□ 1.57
CPT1AP50416 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC24.88■■□□□ 1.57
CPT1AP50416 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC24.88■■□□□ 1.57
CPT1AP50416 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC24.88■■□□□ 1.57
CPT1AP50416 NT5C3AP1-201ENST00000394500 1012 ntBASIC24.88■■□□□ 1.57
CPT1AP50416 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC24.88■■□□□ 1.57
CPT1AP50416 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC24.88■■□□□ 1.57
CPT1AP50416 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC24.88■■□□□ 1.57
CPT1AP50416 AC105233.4-201ENST00000642045 216 ntBASIC24.88■■□□□ 1.57
CPT1AP50416 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC24.88■■□□□ 1.57
CPT1AP50416 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC24.88■■□□□ 1.57
CPT1AP50416 STX4-202ENST00000394998 1498 ntTSL 2 BASIC24.88■■□□□ 1.57
CPT1AP50416 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC24.87■■□□□ 1.57
CPT1AP50416 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC24.87■■□□□ 1.57
CPT1AP50416 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC24.87■■□□□ 1.57
CPT1AP50416 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC24.87■■□□□ 1.57
CPT1AP50416 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC24.87■■□□□ 1.57
CPT1AP50416 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC24.87■■□□□ 1.57
CPT1AP50416 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
CPT1AP50416 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC24.87■■□□□ 1.57
CPT1AP50416 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC24.87■■□□□ 1.57
CPT1AP50416 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
CPT1AP50416 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC24.87■■□□□ 1.57
CPT1AP50416 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC24.86■■□□□ 1.57
CPT1AP50416 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC24.86■■□□□ 1.57
CPT1AP50416 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
CPT1AP50416 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC24.86■■□□□ 1.57
CPT1AP50416 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC24.86■■□□□ 1.57
CPT1AP50416 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC24.86■■□□□ 1.57
CPT1AP50416 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC24.86■■□□□ 1.57
CPT1AP50416 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC24.86■■□□□ 1.57
CPT1AP50416 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
CPT1AP50416 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC24.85■■□□□ 1.57
CPT1AP50416 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC24.85■■□□□ 1.57
CPT1AP50416 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC24.85■■□□□ 1.57
CPT1AP50416 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC24.85■■□□□ 1.57
CPT1AP50416 AC004911.1-201ENST00000416316 871 ntBASIC24.85■■□□□ 1.57
CPT1AP50416 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC24.85■■□□□ 1.57
CPT1AP50416 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
CPT1AP50416 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
CPT1AP50416 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
CPT1AP50416 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
CPT1AP50416 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC24.84■■□□□ 1.57
CPT1AP50416 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
CPT1AP50416 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC24.84■■□□□ 1.57
CPT1AP50416 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC24.84■■□□□ 1.57
CPT1AP50416 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC24.84■■□□□ 1.57
CPT1AP50416 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC24.84■■□□□ 1.57
CPT1AP50416 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
CPT1AP50416 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC24.83■■□□□ 1.57
CPT1AP50416 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC24.83■■□□□ 1.57
CPT1AP50416 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
CPT1AP50416 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC24.83■■□□□ 1.57
CPT1AP50416 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC24.83■■□□□ 1.57
CPT1AP50416 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC24.83■■□□□ 1.57
CPT1AP50416 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC24.83■■□□□ 1.57
CPT1AP50416 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC24.83■■□□□ 1.57
CPT1AP50416 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC24.83■■□□□ 1.57
CPT1AP50416 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC24.83■■□□□ 1.57
CPT1AP50416 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC24.83■■□□□ 1.57
CPT1AP50416 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC24.83■■□□□ 1.57
CPT1AP50416 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC24.83■■□□□ 1.57
CPT1AP50416 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC24.83■■□□□ 1.57
CPT1AP50416 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC24.83■■□□□ 1.56
CPT1AP50416 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC24.82■■□□□ 1.56
CPT1AP50416 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC24.82■■□□□ 1.56
CPT1AP50416 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC24.82■■□□□ 1.56
CPT1AP50416 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
CPT1AP50416 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
CPT1AP50416 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC24.82■■□□□ 1.56
CPT1AP50416 MFF-208ENST00000409616 1247 ntTSL 5 BASIC24.82■■□□□ 1.56
CPT1AP50416 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC24.82■■□□□ 1.56
CPT1AP50416 DLX3-202ENST00000512495 834 ntTSL 2 BASIC24.82■■□□□ 1.56
CPT1AP50416 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC24.82■■□□□ 1.56
CPT1AP50416 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC24.82■■□□□ 1.56
CPT1AP50416 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC24.82■■□□□ 1.56
CPT1AP50416 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC24.82■■□□□ 1.56
CPT1AP50416 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
CPT1AP50416 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC24.82■■□□□ 1.56
CPT1AP50416 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC24.81■■□□□ 1.56
CPT1AP50416 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
CPT1AP50416 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC24.81■■□□□ 1.56
CPT1AP50416 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC24.81■■□□□ 1.56
CPT1AP50416 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
CPT1AP50416 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC24.81■■□□□ 1.56
CPT1AP50416 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC24.81■■□□□ 1.56
CPT1AP50416 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC24.81■■□□□ 1.56
Retrieved 100 of 98,524 protein–RNA pairs in 24.2 ms