Protein–RNA interactions for Protein: P33552

CKS2, Cyclin-dependent kinases regulatory subunit 2, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS2P33552 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
CKS2P33552 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC16.32■□□□□ 0.2
CKS2P33552 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
CKS2P33552 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CKS2P33552 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC16.32■□□□□ 0.2
CKS2P33552 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC16.32■□□□□ 0.2
CKS2P33552 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
CKS2P33552 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
CKS2P33552 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC16.32■□□□□ 0.2
CKS2P33552 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
CKS2P33552 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CKS2P33552 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CKS2P33552 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CKS2P33552 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC16.31■□□□□ 0.2
CKS2P33552 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC16.31■□□□□ 0.2
CKS2P33552 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC16.31■□□□□ 0.2
CKS2P33552 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CKS2P33552 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
CKS2P33552 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CKS2P33552 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
CKS2P33552 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CKS2P33552 RNF166-209ENST00000567844 633 ntTSL 5 BASIC16.31■□□□□ 0.2
CKS2P33552 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
CKS2P33552 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC16.31■□□□□ 0.2
CKS2P33552 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC16.31■□□□□ 0.2
CKS2P33552 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
CKS2P33552 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CKS2P33552 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CKS2P33552 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CKS2P33552 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CKS2P33552 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC16.3■□□□□ 0.2
CKS2P33552 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC16.3■□□□□ 0.2
CKS2P33552 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CKS2P33552 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CKS2P33552 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CKS2P33552 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
CKS2P33552 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC16.3■□□□□ 0.2
CKS2P33552 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC16.3■□□□□ 0.2
CKS2P33552 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CKS2P33552 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC16.3■□□□□ 0.2
CKS2P33552 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC16.3■□□□□ 0.2
CKS2P33552 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC16.3■□□□□ 0.2
CKS2P33552 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CKS2P33552 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC16.3■□□□□ 0.2
CKS2P33552 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
CKS2P33552 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
CKS2P33552 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CKS2P33552 AC090877.2-201ENST00000558441 1738 ntBASIC16.3■□□□□ 0.2
CKS2P33552 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CKS2P33552 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CKS2P33552 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC16.3■□□□□ 0.2
CKS2P33552 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
CKS2P33552 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
CKS2P33552 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
CKS2P33552 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC16.29■□□□□ 0.2
CKS2P33552 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC16.29■□□□□ 0.2
CKS2P33552 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC16.29■□□□□ 0.2
CKS2P33552 AC093536.1-201ENST00000569153 554 ntBASIC16.29■□□□□ 0.2
CKS2P33552 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC16.29■□□□□ 0.2
CKS2P33552 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC16.29■□□□□ 0.2
CKS2P33552 AL022069.1-201ENST00000568025 1636 ntBASIC16.29■□□□□ 0.2
CKS2P33552 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CKS2P33552 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC16.29■□□□□ 0.2
CKS2P33552 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
CKS2P33552 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CKS2P33552 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
CKS2P33552 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CKS2P33552 AC139530.1-201ENST00000575312 1977 ntBASIC16.28■□□□□ 0.2
CKS2P33552 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CKS2P33552 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CKS2P33552 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CKS2P33552 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CKS2P33552 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
CKS2P33552 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
CKS2P33552 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC16.28■□□□□ 0.2
CKS2P33552 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CKS2P33552 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CKS2P33552 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CKS2P33552 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC16.28■□□□□ 0.2
CKS2P33552 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CKS2P33552 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CKS2P33552 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CKS2P33552 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CKS2P33552 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CKS2P33552 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
CKS2P33552 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
CKS2P33552 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
CKS2P33552 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CKS2P33552 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC16.27■□□□□ 0.2
CKS2P33552 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CKS2P33552 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CKS2P33552 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CKS2P33552 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CKS2P33552 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CKS2P33552 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CKS2P33552 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CKS2P33552 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CKS2P33552 AC060814.1-201ENST00000554326 538 ntBASIC16.27■□□□□ 0.2
CKS2P33552 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CKS2P33552 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 16.2 ms