Protein–RNA interactions for Protein: P30531

SLC6A1, Sodium- and chloride-dependent GABA transporter 1, humanhuman

Predictions only

Length 599 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A1P30531 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC19.13■□□□□ 0.65
SLC6A1P30531 RP9P-202ENST00000450133 1212 ntBASIC19.13■□□□□ 0.65
SLC6A1P30531 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC19.13■□□□□ 0.65
SLC6A1P30531 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
SLC6A1P30531 AC079630.1-202ENST00000618127 1840 ntBASIC19.13■□□□□ 0.65
SLC6A1P30531 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SLC6A1P30531 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
SLC6A1P30531 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SLC6A1P30531 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SLC6A1P30531 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SLC6A1P30531 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC19.13■□□□□ 0.65
SLC6A1P30531 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
SLC6A1P30531 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC19.13■□□□□ 0.65
SLC6A1P30531 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC19.13■□□□□ 0.65
SLC6A1P30531 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SLC6A1P30531 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC19.12■□□□□ 0.65
SLC6A1P30531 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC19.12■□□□□ 0.65
SLC6A1P30531 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SLC6A1P30531 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SLC6A1P30531 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC19.12■□□□□ 0.65
SLC6A1P30531 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SLC6A1P30531 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC19.12■□□□□ 0.65
SLC6A1P30531 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SLC6A1P30531 TSPY13P-201ENST00000338964 914 ntBASIC19.12■□□□□ 0.65
SLC6A1P30531 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
SLC6A1P30531 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC19.12■□□□□ 0.65
SLC6A1P30531 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
SLC6A1P30531 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SLC6A1P30531 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
SLC6A1P30531 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
SLC6A1P30531 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SLC6A1P30531 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SLC6A1P30531 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SLC6A1P30531 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
SLC6A1P30531 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
SLC6A1P30531 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC19.12■□□□□ 0.65
SLC6A1P30531 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SLC6A1P30531 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SLC6A1P30531 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
SLC6A1P30531 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
SLC6A1P30531 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SLC6A1P30531 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC19.11■□□□□ 0.65
SLC6A1P30531 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC19.11■□□□□ 0.65
SLC6A1P30531 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC19.11■□□□□ 0.65
SLC6A1P30531 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
SLC6A1P30531 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC19.11■□□□□ 0.65
SLC6A1P30531 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
SLC6A1P30531 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC19.11■□□□□ 0.65
SLC6A1P30531 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
SLC6A1P30531 KRT18P60-201ENST00000312876 1297 ntBASIC19.11■□□□□ 0.65
SLC6A1P30531 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC19.11■□□□□ 0.65
SLC6A1P30531 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SLC6A1P30531 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC19.11■□□□□ 0.65
SLC6A1P30531 AC080038.3-201ENST00000623346 1952 ntBASIC19.11■□□□□ 0.65
SLC6A1P30531 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC19.11■□□□□ 0.65
SLC6A1P30531 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC19.11■□□□□ 0.65
SLC6A1P30531 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
SLC6A1P30531 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
SLC6A1P30531 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
SLC6A1P30531 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
SLC6A1P30531 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
SLC6A1P30531 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC19.1■□□□□ 0.65
SLC6A1P30531 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC19.1■□□□□ 0.65
SLC6A1P30531 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
SLC6A1P30531 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
SLC6A1P30531 AC005229.4-201ENST00000610085 2198 ntBASIC19.09■□□□□ 0.65
SLC6A1P30531 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
SLC6A1P30531 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC19.09■□□□□ 0.65
SLC6A1P30531 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
SLC6A1P30531 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
SLC6A1P30531 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC19.09■□□□□ 0.65
SLC6A1P30531 AC133552.2-201ENST00000619106 1032 ntBASIC19.09■□□□□ 0.65
SLC6A1P30531 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
SLC6A1P30531 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
SLC6A1P30531 FAM99A-202ENST00000538190 1989 ntBASIC19.09■□□□□ 0.65
SLC6A1P30531 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
SLC6A1P30531 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC19.09■□□□□ 0.65
SLC6A1P30531 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
SLC6A1P30531 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
SLC6A1P30531 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
SLC6A1P30531 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
SLC6A1P30531 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC19.08■□□□□ 0.65
SLC6A1P30531 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
SLC6A1P30531 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.64
SLC6A1P30531 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
SLC6A1P30531 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
SLC6A1P30531 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC19.08■□□□□ 0.64
SLC6A1P30531 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.64
SLC6A1P30531 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
SLC6A1P30531 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
SLC6A1P30531 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
SLC6A1P30531 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC19.07■□□□□ 0.64
SLC6A1P30531 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
SLC6A1P30531 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
SLC6A1P30531 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
SLC6A1P30531 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC19.07■□□□□ 0.64
SLC6A1P30531 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
SLC6A1P30531 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
SLC6A1P30531 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC19.06■□□□□ 0.64
SLC6A1P30531 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 18.2 ms