Protein–RNA interactions for Protein: P29965

CD40LG, CD40 ligand, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40LGP29965 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CD40LGP29965 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
CD40LGP29965 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
CD40LGP29965 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC19.67■□□□□ 0.74
CD40LGP29965 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CD40LGP29965 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CD40LGP29965 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CD40LGP29965 AC007952.6-201ENST00000573168 2673 ntBASIC19.67■□□□□ 0.74
CD40LGP29965 AC003957.1-201ENST00000625108 2673 ntBASIC19.67■□□□□ 0.74
CD40LGP29965 FAM99A-202ENST00000538190 1989 ntBASIC19.67■□□□□ 0.74
CD40LGP29965 AC080038.3-201ENST00000623346 1952 ntBASIC19.67■□□□□ 0.74
CD40LGP29965 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC19.67■□□□□ 0.74
CD40LGP29965 METRNL-202ENST00000570778 967 ntTSL 5 BASIC19.67■□□□□ 0.74
CD40LGP29965 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
CD40LGP29965 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
CD40LGP29965 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CD40LGP29965 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
CD40LGP29965 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
CD40LGP29965 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
CD40LGP29965 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC19.66■□□□□ 0.74
CD40LGP29965 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC19.66■□□□□ 0.74
CD40LGP29965 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC19.66■□□□□ 0.74
CD40LGP29965 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC19.66■□□□□ 0.74
CD40LGP29965 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC19.66■□□□□ 0.74
CD40LGP29965 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CD40LGP29965 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CD40LGP29965 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC19.66■□□□□ 0.74
CD40LGP29965 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
CD40LGP29965 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CD40LGP29965 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC19.66■□□□□ 0.74
CD40LGP29965 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
CD40LGP29965 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC19.65■□□□□ 0.74
CD40LGP29965 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC19.65■□□□□ 0.74
CD40LGP29965 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CD40LGP29965 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CD40LGP29965 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CD40LGP29965 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
CD40LGP29965 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
CD40LGP29965 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
CD40LGP29965 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC19.65■□□□□ 0.74
CD40LGP29965 MBP-237ENST00000579129 1052 ntTSL 5 BASIC19.65■□□□□ 0.74
CD40LGP29965 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC19.65■□□□□ 0.74
CD40LGP29965 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
CD40LGP29965 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CD40LGP29965 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CD40LGP29965 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
CD40LGP29965 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CD40LGP29965 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
CD40LGP29965 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CD40LGP29965 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
CD40LGP29965 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
CD40LGP29965 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
CD40LGP29965 AC148477.6-201ENST00000623746 465 ntBASIC19.64■□□□□ 0.73
CD40LGP29965 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CD40LGP29965 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
CD40LGP29965 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
CD40LGP29965 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CD40LGP29965 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC19.64■□□□□ 0.73
CD40LGP29965 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CD40LGP29965 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC19.63■□□□□ 0.73
CD40LGP29965 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CD40LGP29965 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC19.63■□□□□ 0.73
CD40LGP29965 AC079630.1-202ENST00000618127 1840 ntBASIC19.63■□□□□ 0.73
CD40LGP29965 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC19.63■□□□□ 0.73
CD40LGP29965 CHST11-203ENST00000547956 936 ntTSL 2 BASIC19.63■□□□□ 0.73
CD40LGP29965 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
CD40LGP29965 AL157384.1-201ENST00000445995 2473 ntBASIC19.63■□□□□ 0.73
CD40LGP29965 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CD40LGP29965 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC19.63■□□□□ 0.73
CD40LGP29965 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC19.63■□□□□ 0.73
CD40LGP29965 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CD40LGP29965 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
CD40LGP29965 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CD40LGP29965 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
CD40LGP29965 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CD40LGP29965 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CD40LGP29965 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
CD40LGP29965 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CD40LGP29965 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC19.62■□□□□ 0.73
CD40LGP29965 AC126177.7-201ENST00000547904 679 ntBASIC19.62■□□□□ 0.73
CD40LGP29965 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
CD40LGP29965 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC19.62■□□□□ 0.73
CD40LGP29965 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
CD40LGP29965 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CD40LGP29965 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC19.61■□□□□ 0.73
CD40LGP29965 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC19.61■□□□□ 0.73
CD40LGP29965 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC19.61■□□□□ 0.73
CD40LGP29965 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CD40LGP29965 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CD40LGP29965 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CD40LGP29965 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CD40LGP29965 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CD40LGP29965 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC19.61■□□□□ 0.73
CD40LGP29965 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC19.61■□□□□ 0.73
CD40LGP29965 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
CD40LGP29965 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CD40LGP29965 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CD40LGP29965 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CD40LGP29965 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
CD40LGP29965 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms