Protein–RNA interactions for Protein: P20333

TNFRSF1B, Tumor necrosis factor receptor superfamily member 1B, humanhuman

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1BP20333 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
TNFRSF1BP20333 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC20.64■□□□□ 0.9
TNFRSF1BP20333 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
TNFRSF1BP20333 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC20.64■□□□□ 0.89
TNFRSF1BP20333 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
TNFRSF1BP20333 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC20.64■□□□□ 0.89
TNFRSF1BP20333 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
TNFRSF1BP20333 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC20.63■□□□□ 0.89
TNFRSF1BP20333 AC103834.1-201ENST00000520383 144 ntBASIC20.63■□□□□ 0.89
TNFRSF1BP20333 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC20.63■□□□□ 0.89
TNFRSF1BP20333 AL033527.3-201ENST00000566366 1196 ntBASIC20.63■□□□□ 0.89
TNFRSF1BP20333 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
TNFRSF1BP20333 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
TNFRSF1BP20333 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
TNFRSF1BP20333 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
TNFRSF1BP20333 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
TNFRSF1BP20333 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
TNFRSF1BP20333 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
TNFRSF1BP20333 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
TNFRSF1BP20333 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
TNFRSF1BP20333 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC20.62■□□□□ 0.89
TNFRSF1BP20333 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
TNFRSF1BP20333 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
TNFRSF1BP20333 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
TNFRSF1BP20333 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
TNFRSF1BP20333 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC20.62■□□□□ 0.89
TNFRSF1BP20333 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
TNFRSF1BP20333 MIR4508-201ENST00000584178 70 ntBASIC20.62■□□□□ 0.89
TNFRSF1BP20333 SNX5-217ENST00000606557 1087 ntBASIC20.62■□□□□ 0.89
TNFRSF1BP20333 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC20.62■□□□□ 0.89
TNFRSF1BP20333 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC20.62■□□□□ 0.89
TNFRSF1BP20333 AC080038.3-201ENST00000623346 1952 ntBASIC20.62■□□□□ 0.89
TNFRSF1BP20333 EFS-203ENST00000429593 2610 ntTSL 2 BASIC20.62■□□□□ 0.89
TNFRSF1BP20333 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC20.62■□□□□ 0.89
TNFRSF1BP20333 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
TNFRSF1BP20333 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
TNFRSF1BP20333 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
TNFRSF1BP20333 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
TNFRSF1BP20333 AC139530.1-201ENST00000575312 1977 ntBASIC20.61■□□□□ 0.89
TNFRSF1BP20333 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
TNFRSF1BP20333 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
TNFRSF1BP20333 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC20.61■□□□□ 0.89
TNFRSF1BP20333 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
TNFRSF1BP20333 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC20.61■□□□□ 0.89
TNFRSF1BP20333 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
TNFRSF1BP20333 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
TNFRSF1BP20333 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
TNFRSF1BP20333 REST-206ENST00000612429 1376 ntTSL 5 BASIC20.6■□□□□ 0.89
TNFRSF1BP20333 REST-207ENST00000616975 1370 ntTSL 5 BASIC20.6■□□□□ 0.89
TNFRSF1BP20333 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
TNFRSF1BP20333 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
TNFRSF1BP20333 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
TNFRSF1BP20333 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
TNFRSF1BP20333 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
TNFRSF1BP20333 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
TNFRSF1BP20333 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC20.6■□□□□ 0.89
TNFRSF1BP20333 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC20.6■□□□□ 0.89
TNFRSF1BP20333 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC20.6■□□□□ 0.89
TNFRSF1BP20333 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC20.6■□□□□ 0.89
TNFRSF1BP20333 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC20.6■□□□□ 0.89
TNFRSF1BP20333 LSM7-203ENST00000585409 512 ntTSL 2 BASIC20.6■□□□□ 0.89
TNFRSF1BP20333 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC20.6■□□□□ 0.89
TNFRSF1BP20333 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
TNFRSF1BP20333 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
TNFRSF1BP20333 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
TNFRSF1BP20333 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC20.6■□□□□ 0.89
TNFRSF1BP20333 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
TNFRSF1BP20333 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC20.6■□□□□ 0.89
TNFRSF1BP20333 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
TNFRSF1BP20333 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
TNFRSF1BP20333 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
TNFRSF1BP20333 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC20.59■□□□□ 0.89
TNFRSF1BP20333 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC20.59■□□□□ 0.89
TNFRSF1BP20333 AC103724.3-201ENST00000564481 992 ntBASIC20.59■□□□□ 0.89
TNFRSF1BP20333 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
TNFRSF1BP20333 AC012354.3-201ENST00000623734 483 ntBASIC20.59■□□□□ 0.89
TNFRSF1BP20333 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC20.59■□□□□ 0.89
TNFRSF1BP20333 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC20.59■□□□□ 0.89
TNFRSF1BP20333 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
TNFRSF1BP20333 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
TNFRSF1BP20333 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
TNFRSF1BP20333 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC20.59■□□□□ 0.89
TNFRSF1BP20333 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
TNFRSF1BP20333 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
TNFRSF1BP20333 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
TNFRSF1BP20333 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
TNFRSF1BP20333 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
TNFRSF1BP20333 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
TNFRSF1BP20333 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC20.58■□□□□ 0.89
TNFRSF1BP20333 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC20.58■□□□□ 0.89
TNFRSF1BP20333 AC137767.1-201ENST00000602918 1920 ntBASIC20.58■□□□□ 0.88
TNFRSF1BP20333 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC20.58■□□□□ 0.88
TNFRSF1BP20333 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.88
TNFRSF1BP20333 AC144652.1-201ENST00000609974 1624 ntBASIC20.57■□□□□ 0.88
TNFRSF1BP20333 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
TNFRSF1BP20333 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
TNFRSF1BP20333 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
TNFRSF1BP20333 SENP5-202ENST00000419026 973 ntTSL 3 BASIC20.57■□□□□ 0.88
TNFRSF1BP20333 USP48-205ENST00000421625 2818 ntTSL 2 BASIC20.57■□□□□ 0.88
TNFRSF1BP20333 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC20.56■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 14 ms