Protein–RNA interactions for Protein: P13236

CCL4, C-C motif chemokine 4, humanhuman

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL4P13236 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC21.19■□□□□ 0.98
CCL4P13236 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
CCL4P13236 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CCL4P13236 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC21.19■□□□□ 0.98
CCL4P13236 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
CCL4P13236 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
CCL4P13236 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC21.19■□□□□ 0.98
CCL4P13236 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC21.19■□□□□ 0.98
CCL4P13236 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CCL4P13236 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
CCL4P13236 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC21.19■□□□□ 0.98
CCL4P13236 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC21.19■□□□□ 0.98
CCL4P13236 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CCL4P13236 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
CCL4P13236 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CCL4P13236 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CCL4P13236 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
CCL4P13236 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CCL4P13236 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC21.18■□□□□ 0.98
CCL4P13236 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC21.18■□□□□ 0.98
CCL4P13236 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
CCL4P13236 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CCL4P13236 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC21.18■□□□□ 0.98
CCL4P13236 LHPP-203ENST00000392757 840 ntTSL 3 BASIC21.18■□□□□ 0.98
CCL4P13236 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC21.18■□□□□ 0.98
CCL4P13236 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
CCL4P13236 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC21.18■□□□□ 0.98
CCL4P13236 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
CCL4P13236 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC21.18■□□□□ 0.98
CCL4P13236 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC21.18■□□□□ 0.98
CCL4P13236 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CCL4P13236 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
CCL4P13236 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CCL4P13236 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
CCL4P13236 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
CCL4P13236 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CCL4P13236 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC21.18■□□□□ 0.98
CCL4P13236 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
CCL4P13236 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CCL4P13236 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC21.17■□□□□ 0.98
CCL4P13236 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CCL4P13236 AP005435.1-201ENST00000529293 1178 ntBASIC21.17■□□□□ 0.98
CCL4P13236 KRT18P14-201ENST00000534205 1250 ntBASIC21.17■□□□□ 0.98
CCL4P13236 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC21.17■□□□□ 0.98
CCL4P13236 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CCL4P13236 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CCL4P13236 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CCL4P13236 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CCL4P13236 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CCL4P13236 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CCL4P13236 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
CCL4P13236 AC004911.1-201ENST00000416316 871 ntBASIC21.16■□□□□ 0.98
CCL4P13236 GXYLT1P2-201ENST00000433312 1230 ntBASIC21.16■□□□□ 0.98
CCL4P13236 NTF6G-201ENST00000591094 616 ntBASIC21.16■□□□□ 0.98
CCL4P13236 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CCL4P13236 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
CCL4P13236 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC21.15■□□□□ 0.98
CCL4P13236 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CCL4P13236 LINC02228-203ENST00000641970 1355 ntBASIC21.15■□□□□ 0.98
CCL4P13236 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
CCL4P13236 TERF1P2-201ENST00000583350 1212 ntBASIC21.15■□□□□ 0.98
CCL4P13236 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
CCL4P13236 EED-207ENST00000528180 1745 ntTSL 5 BASIC21.15■□□□□ 0.98
CCL4P13236 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
CCL4P13236 STX4-202ENST00000394998 1498 ntTSL 2 BASIC21.14■□□□□ 0.98
CCL4P13236 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
CCL4P13236 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
CCL4P13236 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC21.14■□□□□ 0.97
CCL4P13236 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC21.14■□□□□ 0.97
CCL4P13236 NT5C3AP1-201ENST00000394500 1012 ntBASIC21.14■□□□□ 0.97
CCL4P13236 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC21.14■□□□□ 0.97
CCL4P13236 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
CCL4P13236 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
CCL4P13236 AC105233.4-201ENST00000642045 216 ntBASIC21.14■□□□□ 0.97
CCL4P13236 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC21.14■□□□□ 0.97
CCL4P13236 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
CCL4P13236 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CCL4P13236 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CCL4P13236 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
CCL4P13236 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC21.13■□□□□ 0.97
CCL4P13236 AC020928.2-201ENST00000588717 2197 ntBASIC21.13■□□□□ 0.97
CCL4P13236 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
CCL4P13236 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CCL4P13236 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CCL4P13236 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CCL4P13236 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CCL4P13236 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
CCL4P13236 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
CCL4P13236 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC21.13■□□□□ 0.97
CCL4P13236 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC21.13■□□□□ 0.97
CCL4P13236 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
CCL4P13236 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
CCL4P13236 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
CCL4P13236 MPST-204ENST00000404393 1329 ntTSL 5 BASIC21.12■□□□□ 0.97
CCL4P13236 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC21.12■□□□□ 0.97
CCL4P13236 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CCL4P13236 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
CCL4P13236 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
CCL4P13236 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
CCL4P13236 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 21.6 ms