Protein–RNA interactions for Protein: P09661

SNRPA1, U2 small nuclear ribonucleoprotein A', humanhuman

Known RBP Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1P09661 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC28.61■■■□□ 2.17
SNRPA1P09661 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC28.61■■■□□ 2.17
SNRPA1P09661 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC28.61■■■□□ 2.17
SNRPA1P09661 STX4-202ENST00000394998 1498 ntTSL 2 BASIC28.61■■■□□ 2.17
SNRPA1P09661 HACD1-201ENST00000326961 773 ntTSL 2 BASIC28.61■■■□□ 2.17
SNRPA1P09661 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC28.61■■■□□ 2.17
SNRPA1P09661 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC28.61■■■□□ 2.17
SNRPA1P09661 AL354811.1-201ENST00000610286 706 ntBASIC28.61■■■□□ 2.17
SNRPA1P09661 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC28.61■■■□□ 2.17
SNRPA1P09661 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC28.61■■■□□ 2.17
SNRPA1P09661 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC28.61■■■□□ 2.17
SNRPA1P09661 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC28.6■■■□□ 2.17
SNRPA1P09661 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC28.6■■■□□ 2.17
SNRPA1P09661 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC28.6■■■□□ 2.17
SNRPA1P09661 AC123595.1-201ENST00000440769 1046 ntBASIC28.6■■■□□ 2.17
SNRPA1P09661 RAB43-208ENST00000615093 783 ntTSL 5 BASIC28.6■■■□□ 2.17
SNRPA1P09661 MIR6084-201ENST00000622012 110 ntBASIC28.6■■■□□ 2.17
SNRPA1P09661 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC28.6■■■□□ 2.17
SNRPA1P09661 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC28.6■■■□□ 2.17
SNRPA1P09661 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC28.6■■■□□ 2.17
SNRPA1P09661 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC28.59■■■□□ 2.17
SNRPA1P09661 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC28.59■■■□□ 2.17
SNRPA1P09661 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC28.59■■■□□ 2.17
SNRPA1P09661 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC28.59■■■□□ 2.17
SNRPA1P09661 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC28.59■■■□□ 2.17
SNRPA1P09661 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC28.59■■■□□ 2.17
SNRPA1P09661 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC28.59■■■□□ 2.17
SNRPA1P09661 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC28.59■■■□□ 2.17
SNRPA1P09661 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC28.59■■■□□ 2.17
SNRPA1P09661 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC28.59■■■□□ 2.17
SNRPA1P09661 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC28.59■■■□□ 2.17
SNRPA1P09661 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC28.59■■■□□ 2.17
SNRPA1P09661 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC28.58■■■□□ 2.17
SNRPA1P09661 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC28.58■■■□□ 2.17
SNRPA1P09661 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC28.58■■■□□ 2.17
SNRPA1P09661 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC28.58■■■□□ 2.17
SNRPA1P09661 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC28.58■■■□□ 2.17
SNRPA1P09661 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC28.58■■■□□ 2.17
SNRPA1P09661 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC28.58■■■□□ 2.17
SNRPA1P09661 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC28.58■■■□□ 2.17
SNRPA1P09661 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC28.57■■■□□ 2.16
SNRPA1P09661 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC28.57■■■□□ 2.16
SNRPA1P09661 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC28.57■■■□□ 2.16
SNRPA1P09661 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC28.57■■■□□ 2.16
SNRPA1P09661 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC28.57■■■□□ 2.16
SNRPA1P09661 DUX4L2-201ENST00000561772 1275 ntBASIC28.57■■■□□ 2.16
SNRPA1P09661 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC28.57■■■□□ 2.16
SNRPA1P09661 DUX4L6-201ENST00000626483 1275 ntBASIC28.57■■■□□ 2.16
SNRPA1P09661 DUX4L1-201ENST00000627662 1275 ntBASIC28.57■■■□□ 2.16
SNRPA1P09661 DUX4L8-201ENST00000629013 1275 ntBASIC28.57■■■□□ 2.16
SNRPA1P09661 DUX4L3-201ENST00000630187 1275 ntBASIC28.57■■■□□ 2.16
SNRPA1P09661 DUX4L7-201ENST00000630678 1275 ntBASIC28.57■■■□□ 2.16
SNRPA1P09661 DUX4L5-201ENST00000630834 1275 ntBASIC28.57■■■□□ 2.16
SNRPA1P09661 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC28.57■■■□□ 2.16
SNRPA1P09661 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC28.57■■■□□ 2.16
SNRPA1P09661 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC28.57■■■□□ 2.16
SNRPA1P09661 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC28.57■■■□□ 2.16
SNRPA1P09661 AC079630.1-202ENST00000618127 1840 ntBASIC28.57■■■□□ 2.16
SNRPA1P09661 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC28.57■■■□□ 2.16
SNRPA1P09661 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC28.56■■■□□ 2.16
SNRPA1P09661 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC28.56■■■□□ 2.16
SNRPA1P09661 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC28.56■■■□□ 2.16
SNRPA1P09661 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC28.56■■■□□ 2.16
SNRPA1P09661 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC28.56■■■□□ 2.16
SNRPA1P09661 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC28.55■■■□□ 2.16
SNRPA1P09661 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC28.55■■■□□ 2.16
SNRPA1P09661 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC28.55■■■□□ 2.16
SNRPA1P09661 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC28.55■■■□□ 2.16
SNRPA1P09661 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC28.55■■■□□ 2.16
SNRPA1P09661 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC28.55■■■□□ 2.16
SNRPA1P09661 LHPP-203ENST00000392757 840 ntTSL 3 BASIC28.55■■■□□ 2.16
SNRPA1P09661 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC28.55■■■□□ 2.16
SNRPA1P09661 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC28.54■■■□□ 2.16
SNRPA1P09661 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC28.54■■■□□ 2.16
SNRPA1P09661 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC28.54■■■□□ 2.16
SNRPA1P09661 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC28.54■■■□□ 2.16
SNRPA1P09661 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC28.54■■■□□ 2.16
SNRPA1P09661 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC28.54■■■□□ 2.16
SNRPA1P09661 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC28.54■■■□□ 2.16
SNRPA1P09661 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC28.54■■■□□ 2.16
SNRPA1P09661 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC28.54■■■□□ 2.16
SNRPA1P09661 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC28.53■■■□□ 2.16
SNRPA1P09661 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC28.53■■■□□ 2.16
SNRPA1P09661 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC28.53■■■□□ 2.16
SNRPA1P09661 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC28.53■■■□□ 2.16
SNRPA1P09661 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC28.53■■■□□ 2.16
SNRPA1P09661 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC28.53■■■□□ 2.16
SNRPA1P09661 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC28.52■■■□□ 2.16
SNRPA1P09661 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC28.52■■■□□ 2.16
SNRPA1P09661 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC28.52■■■□□ 2.16
SNRPA1P09661 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC28.52■■■□□ 2.16
SNRPA1P09661 KRT18P5-201ENST00000436075 1291 ntBASIC28.52■■■□□ 2.16
SNRPA1P09661 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC28.52■■■□□ 2.16
SNRPA1P09661 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC28.52■■■□□ 2.16
SNRPA1P09661 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC28.52■■■□□ 2.16
SNRPA1P09661 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC28.52■■■□□ 2.16
SNRPA1P09661 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC28.51■■■□□ 2.16
SNRPA1P09661 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC28.51■■■□□ 2.15
SNRPA1P09661 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC28.51■■■□□ 2.15
SNRPA1P09661 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC28.51■■■□□ 2.15
Retrieved 100 of 98,524 protein–RNA pairs in 20.1 ms