Protein–RNA interactions for Protein: P04437

TCRA, T-cell receptor alpha chain V region CTL-L17, humanhuman

Predictions only

Length 139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRAP04437 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TCRAP04437 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
TCRAP04437 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC16.91■□□□□ 0.3
TCRAP04437 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TCRAP04437 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TCRAP04437 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
TCRAP04437 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
TCRAP04437 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
TCRAP04437 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
TCRAP04437 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TCRAP04437 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TCRAP04437 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
TCRAP04437 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC16.9■□□□□ 0.3
TCRAP04437 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
TCRAP04437 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
TCRAP04437 GAK-223ENST00000628912 497 ntTSL 5 BASIC16.9■□□□□ 0.3
TCRAP04437 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TCRAP04437 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
TCRAP04437 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TCRAP04437 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TCRAP04437 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
TCRAP04437 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC16.89■□□□□ 0.3
TCRAP04437 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC16.89■□□□□ 0.29
TCRAP04437 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
TCRAP04437 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TCRAP04437 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC16.89■□□□□ 0.29
TCRAP04437 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
TCRAP04437 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
TCRAP04437 AC080038.3-201ENST00000623346 1952 ntBASIC16.89■□□□□ 0.29
TCRAP04437 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TCRAP04437 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
TCRAP04437 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TCRAP04437 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TCRAP04437 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
TCRAP04437 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TCRAP04437 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TCRAP04437 FBXW4P1-201ENST00000426721 2239 ntBASIC16.88■□□□□ 0.29
TCRAP04437 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC16.88■□□□□ 0.29
TCRAP04437 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC16.88■□□□□ 0.29
TCRAP04437 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC16.88■□□□□ 0.29
TCRAP04437 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC16.88■□□□□ 0.29
TCRAP04437 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TCRAP04437 LBH-205ENST00000407930 756 ntTSL 2 BASIC16.88■□□□□ 0.29
TCRAP04437 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
TCRAP04437 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC16.88■□□□□ 0.29
TCRAP04437 MIR4449-201ENST00000578365 66 ntBASIC16.88■□□□□ 0.29
TCRAP04437 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
TCRAP04437 RNF126P1-201ENST00000567452 1320 ntBASIC16.88■□□□□ 0.29
TCRAP04437 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
TCRAP04437 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC16.88■□□□□ 0.29
TCRAP04437 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
TCRAP04437 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
TCRAP04437 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TCRAP04437 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC16.87■□□□□ 0.29
TCRAP04437 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC16.87■□□□□ 0.29
TCRAP04437 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
TCRAP04437 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC16.87■□□□□ 0.29
TCRAP04437 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
TCRAP04437 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
TCRAP04437 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC16.87■□□□□ 0.29
TCRAP04437 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
TCRAP04437 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
TCRAP04437 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TCRAP04437 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
TCRAP04437 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TCRAP04437 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TCRAP04437 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
TCRAP04437 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
TCRAP04437 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
TCRAP04437 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC16.86■□□□□ 0.29
TCRAP04437 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TCRAP04437 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
TCRAP04437 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC16.86■□□□□ 0.29
TCRAP04437 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
TCRAP04437 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC16.86■□□□□ 0.29
TCRAP04437 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC16.86■□□□□ 0.29
TCRAP04437 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
TCRAP04437 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
TCRAP04437 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC16.85■□□□□ 0.29
TCRAP04437 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
TCRAP04437 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
TCRAP04437 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TCRAP04437 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC16.85■□□□□ 0.29
TCRAP04437 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TCRAP04437 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
TCRAP04437 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC16.85■□□□□ 0.29
TCRAP04437 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC16.85■□□□□ 0.29
TCRAP04437 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC16.85■□□□□ 0.29
TCRAP04437 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC16.85■□□□□ 0.29
TCRAP04437 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
TCRAP04437 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
TCRAP04437 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC16.85■□□□□ 0.29
TCRAP04437 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
TCRAP04437 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC16.84■□□□□ 0.29
TCRAP04437 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TCRAP04437 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
TCRAP04437 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC16.84■□□□□ 0.29
TCRAP04437 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
TCRAP04437 AC022616.5-201ENST00000518796 181 ntBASIC16.84■□□□□ 0.29
TCRAP04437 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 17.2 ms