Protein–RNA interactions for Protein: P01920

HLA-DQB1, HLA class II histocompatibility antigen, DQ beta 1 chain, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1P01920 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
HLA-DQB1P01920 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
HLA-DQB1P01920 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC19.25■□□□□ 0.67
HLA-DQB1P01920 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
HLA-DQB1P01920 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC19.25■□□□□ 0.67
HLA-DQB1P01920 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC19.25■□□□□ 0.67
HLA-DQB1P01920 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
HLA-DQB1P01920 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
HLA-DQB1P01920 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC19.25■□□□□ 0.67
HLA-DQB1P01920 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
HLA-DQB1P01920 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
HLA-DQB1P01920 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
HLA-DQB1P01920 AC005229.4-201ENST00000610085 2198 ntBASIC19.25■□□□□ 0.67
HLA-DQB1P01920 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC19.24■□□□□ 0.67
HLA-DQB1P01920 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
HLA-DQB1P01920 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
HLA-DQB1P01920 HES4-202ENST00000428771 1040 ntTSL 2 BASIC19.24■□□□□ 0.67
HLA-DQB1P01920 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC19.24■□□□□ 0.67
HLA-DQB1P01920 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
HLA-DQB1P01920 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
HLA-DQB1P01920 AL022069.1-201ENST00000568025 1636 ntBASIC19.24■□□□□ 0.67
HLA-DQB1P01920 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
HLA-DQB1P01920 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
HLA-DQB1P01920 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
HLA-DQB1P01920 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
HLA-DQB1P01920 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC19.24■□□□□ 0.67
HLA-DQB1P01920 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC19.24■□□□□ 0.67
HLA-DQB1P01920 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
HLA-DQB1P01920 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
HLA-DQB1P01920 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
HLA-DQB1P01920 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
HLA-DQB1P01920 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
HLA-DQB1P01920 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
HLA-DQB1P01920 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC19.23■□□□□ 0.67
HLA-DQB1P01920 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
HLA-DQB1P01920 AC010542.4-201ENST00000563151 1910 ntBASIC19.23■□□□□ 0.67
HLA-DQB1P01920 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
HLA-DQB1P01920 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
HLA-DQB1P01920 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
HLA-DQB1P01920 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
HLA-DQB1P01920 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC19.22■□□□□ 0.67
HLA-DQB1P01920 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
HLA-DQB1P01920 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC19.22■□□□□ 0.67
HLA-DQB1P01920 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC19.22■□□□□ 0.67
HLA-DQB1P01920 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC19.22■□□□□ 0.67
HLA-DQB1P01920 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
HLA-DQB1P01920 ALDH1A3-203ENST00000557963 1670 ntBASIC19.21■□□□□ 0.67
HLA-DQB1P01920 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
HLA-DQB1P01920 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
HLA-DQB1P01920 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
HLA-DQB1P01920 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC19.21■□□□□ 0.67
HLA-DQB1P01920 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
HLA-DQB1P01920 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC19.21■□□□□ 0.67
HLA-DQB1P01920 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC19.21■□□□□ 0.67
HLA-DQB1P01920 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
HLA-DQB1P01920 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
HLA-DQB1P01920 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC19.2■□□□□ 0.66
HLA-DQB1P01920 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
HLA-DQB1P01920 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
HLA-DQB1P01920 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
HLA-DQB1P01920 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC19.2■□□□□ 0.66
HLA-DQB1P01920 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC19.2■□□□□ 0.66
HLA-DQB1P01920 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
HLA-DQB1P01920 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
HLA-DQB1P01920 SSSCA1-AS1-201ENST00000567594 614 ntBASIC19.2■□□□□ 0.66
HLA-DQB1P01920 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
HLA-DQB1P01920 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
HLA-DQB1P01920 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
HLA-DQB1P01920 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC19.19■□□□□ 0.66
HLA-DQB1P01920 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
HLA-DQB1P01920 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
HLA-DQB1P01920 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
HLA-DQB1P01920 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC19.19■□□□□ 0.66
HLA-DQB1P01920 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
HLA-DQB1P01920 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC19.19■□□□□ 0.66
HLA-DQB1P01920 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC19.19■□□□□ 0.66
HLA-DQB1P01920 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC19.19■□□□□ 0.66
HLA-DQB1P01920 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
HLA-DQB1P01920 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC19.19■□□□□ 0.66
HLA-DQB1P01920 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC19.18■□□□□ 0.66
HLA-DQB1P01920 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
HLA-DQB1P01920 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
HLA-DQB1P01920 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC19.18■□□□□ 0.66
HLA-DQB1P01920 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
HLA-DQB1P01920 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
HLA-DQB1P01920 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
HLA-DQB1P01920 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
HLA-DQB1P01920 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC19.18■□□□□ 0.66
HLA-DQB1P01920 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC19.18■□□□□ 0.66
HLA-DQB1P01920 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
HLA-DQB1P01920 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
HLA-DQB1P01920 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC19.17■□□□□ 0.66
HLA-DQB1P01920 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
HLA-DQB1P01920 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC19.17■□□□□ 0.66
HLA-DQB1P01920 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
HLA-DQB1P01920 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
HLA-DQB1P01920 LINC01521-201ENST00000504184 1943 ntBASIC19.17■□□□□ 0.66
HLA-DQB1P01920 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC19.17■□□□□ 0.66
HLA-DQB1P01920 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
HLA-DQB1P01920 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 19 ms