Protein–RNA interactions for Protein: O95716

RAB3D, Ras-related protein Rab-3D, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3DO95716 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
RAB3DO95716 AC079630.1-202ENST00000618127 1840 ntBASIC18.88■□□□□ 0.61
RAB3DO95716 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC18.88■□□□□ 0.61
RAB3DO95716 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC18.88■□□□□ 0.61
RAB3DO95716 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
RAB3DO95716 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RAB3DO95716 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RAB3DO95716 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC18.88■□□□□ 0.61
RAB3DO95716 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RAB3DO95716 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RAB3DO95716 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
RAB3DO95716 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
RAB3DO95716 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RAB3DO95716 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RAB3DO95716 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
RAB3DO95716 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
RAB3DO95716 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
RAB3DO95716 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
RAB3DO95716 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
RAB3DO95716 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
RAB3DO95716 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
RAB3DO95716 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
RAB3DO95716 SLC25A24-204ENST00000569674 2357 ntBASIC18.86■□□□□ 0.61
RAB3DO95716 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
RAB3DO95716 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC18.86■□□□□ 0.61
RAB3DO95716 STK32C-205ENST00000456004 607 ntTSL 2 BASIC18.86■□□□□ 0.61
RAB3DO95716 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC18.86■□□□□ 0.61
RAB3DO95716 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC18.86■□□□□ 0.61
RAB3DO95716 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
RAB3DO95716 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
RAB3DO95716 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
RAB3DO95716 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
RAB3DO95716 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
RAB3DO95716 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC18.85■□□□□ 0.61
RAB3DO95716 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
RAB3DO95716 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
RAB3DO95716 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
RAB3DO95716 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC18.85■□□□□ 0.61
RAB3DO95716 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
RAB3DO95716 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
RAB3DO95716 RPS2P7-201ENST00000447334 885 ntBASIC18.85■□□□□ 0.61
RAB3DO95716 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
RAB3DO95716 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
RAB3DO95716 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC18.85■□□□□ 0.61
RAB3DO95716 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
RAB3DO95716 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC18.85■□□□□ 0.61
RAB3DO95716 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
RAB3DO95716 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
RAB3DO95716 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
RAB3DO95716 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC18.85■□□□□ 0.61
RAB3DO95716 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
RAB3DO95716 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
RAB3DO95716 AC080038.3-201ENST00000623346 1952 ntBASIC18.84■□□□□ 0.61
RAB3DO95716 HES4-204ENST00000484667 667 ntTSL 3 BASIC18.84■□□□□ 0.61
RAB3DO95716 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
RAB3DO95716 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
RAB3DO95716 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
RAB3DO95716 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC18.83■□□□□ 0.61
RAB3DO95716 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
RAB3DO95716 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC18.83■□□□□ 0.61
RAB3DO95716 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC18.83■□□□□ 0.61
RAB3DO95716 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC18.83■□□□□ 0.61
RAB3DO95716 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC18.83■□□□□ 0.61
RAB3DO95716 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
RAB3DO95716 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
RAB3DO95716 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
RAB3DO95716 AC131274.2-201ENST00000580697 1507 ntBASIC18.83■□□□□ 0.6
RAB3DO95716 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
RAB3DO95716 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC18.83■□□□□ 0.6
RAB3DO95716 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
RAB3DO95716 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RAB3DO95716 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
RAB3DO95716 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RAB3DO95716 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RAB3DO95716 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
RAB3DO95716 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RAB3DO95716 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RAB3DO95716 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
RAB3DO95716 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC18.82■□□□□ 0.6
RAB3DO95716 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC18.82■□□□□ 0.6
RAB3DO95716 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RAB3DO95716 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC18.81■□□□□ 0.6
RAB3DO95716 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC18.81■□□□□ 0.6
RAB3DO95716 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
RAB3DO95716 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
RAB3DO95716 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
RAB3DO95716 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RAB3DO95716 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
RAB3DO95716 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
RAB3DO95716 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC18.81■□□□□ 0.6
RAB3DO95716 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RAB3DO95716 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
RAB3DO95716 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RAB3DO95716 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RAB3DO95716 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RAB3DO95716 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RAB3DO95716 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC18.81■□□□□ 0.6
RAB3DO95716 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC18.81■□□□□ 0.6
RAB3DO95716 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RAB3DO95716 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC18.8■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 61.7 ms