Protein–RNA interactions for Protein: O94822

LTN1, E3 ubiquitin-protein ligase listerin, humanhuman

Predictions only

Length 1,766 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1O94822 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC29.97■■■□□ 2.39
LTN1O94822 AC004911.1-201ENST00000416316 871 ntBASIC29.97■■■□□ 2.39
LTN1O94822 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC29.97■■■□□ 2.39
LTN1O94822 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC29.96■■■□□ 2.39
LTN1O94822 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC29.96■■■□□ 2.39
LTN1O94822 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC29.96■■■□□ 2.39
LTN1O94822 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC29.96■■■□□ 2.39
LTN1O94822 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC29.96■■■□□ 2.39
LTN1O94822 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC29.96■■■□□ 2.39
LTN1O94822 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC29.96■■■□□ 2.39
LTN1O94822 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC29.96■■■□□ 2.39
LTN1O94822 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC29.96■■■□□ 2.39
LTN1O94822 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC29.96■■■□□ 2.39
LTN1O94822 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC29.96■■■□□ 2.39
LTN1O94822 CREM-210ENST00000374721 2020 ntTSL 5 BASIC29.95■■■□□ 2.39
LTN1O94822 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC29.95■■■□□ 2.39
LTN1O94822 AP005435.1-201ENST00000529293 1178 ntBASIC29.95■■■□□ 2.39
LTN1O94822 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC29.95■■■□□ 2.38
LTN1O94822 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC29.95■■■□□ 2.38
LTN1O94822 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC29.95■■■□□ 2.38
LTN1O94822 AC142381.3-201ENST00000568208 1670 ntBASIC29.95■■■□□ 2.38
LTN1O94822 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC29.95■■■□□ 2.38
LTN1O94822 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC29.95■■■□□ 2.38
LTN1O94822 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC29.95■■■□□ 2.38
LTN1O94822 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC29.94■■■□□ 2.38
LTN1O94822 AC079630.1-202ENST00000618127 1840 ntBASIC29.94■■■□□ 2.38
LTN1O94822 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC29.94■■■□□ 2.38
LTN1O94822 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC29.94■■■□□ 2.38
LTN1O94822 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC29.94■■■□□ 2.38
LTN1O94822 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC29.94■■■□□ 2.38
LTN1O94822 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC29.94■■■□□ 2.38
LTN1O94822 VPS53-216ENST00000574029 585 ntTSL 4 BASIC29.94■■■□□ 2.38
LTN1O94822 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC29.94■■■□□ 2.38
LTN1O94822 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC29.93■■■□□ 2.38
LTN1O94822 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC29.93■■■□□ 2.38
LTN1O94822 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC29.93■■■□□ 2.38
LTN1O94822 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC29.93■■■□□ 2.38
LTN1O94822 EED-207ENST00000528180 1745 ntTSL 5 BASIC29.93■■■□□ 2.38
LTN1O94822 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC29.93■■■□□ 2.38
LTN1O94822 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC29.93■■■□□ 2.38
LTN1O94822 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC29.92■■■□□ 2.38
LTN1O94822 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC29.92■■■□□ 2.38
LTN1O94822 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC29.92■■■□□ 2.38
LTN1O94822 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC29.92■■■□□ 2.38
LTN1O94822 DLX3-202ENST00000512495 834 ntTSL 2 BASIC29.92■■■□□ 2.38
LTN1O94822 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC29.92■■■□□ 2.38
LTN1O94822 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC29.91■■■□□ 2.38
LTN1O94822 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC29.91■■■□□ 2.38
LTN1O94822 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC29.91■■■□□ 2.38
LTN1O94822 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC29.91■■■□□ 2.38
LTN1O94822 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC29.9■■■□□ 2.38
LTN1O94822 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC29.9■■■□□ 2.38
LTN1O94822 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC29.9■■■□□ 2.38
LTN1O94822 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC29.9■■■□□ 2.38
LTN1O94822 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC29.9■■■□□ 2.38
LTN1O94822 MPST-204ENST00000404393 1329 ntTSL 5 BASIC29.89■■■□□ 2.38
LTN1O94822 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC29.89■■■□□ 2.38
LTN1O94822 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC29.89■■■□□ 2.38
LTN1O94822 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC29.89■■■□□ 2.38
LTN1O94822 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC29.89■■■□□ 2.38
LTN1O94822 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC29.89■■■□□ 2.38
LTN1O94822 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC29.89■■■□□ 2.37
LTN1O94822 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC29.88■■■□□ 2.37
LTN1O94822 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC29.88■■■□□ 2.37
LTN1O94822 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC29.88■■■□□ 2.37
LTN1O94822 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC29.88■■■□□ 2.37
LTN1O94822 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC29.87■■■□□ 2.37
LTN1O94822 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC29.87■■■□□ 2.37
LTN1O94822 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC29.87■■■□□ 2.37
LTN1O94822 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC29.87■■■□□ 2.37
LTN1O94822 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC29.87■■■□□ 2.37
LTN1O94822 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC29.87■■■□□ 2.37
LTN1O94822 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC29.87■■■□□ 2.37
LTN1O94822 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC29.87■■■□□ 2.37
LTN1O94822 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC29.87■■■□□ 2.37
LTN1O94822 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC29.86■■■□□ 2.37
LTN1O94822 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC29.86■■■□□ 2.37
LTN1O94822 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC29.86■■■□□ 2.37
LTN1O94822 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC29.86■■■□□ 2.37
LTN1O94822 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC29.86■■■□□ 2.37
LTN1O94822 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC29.85■■■□□ 2.37
LTN1O94822 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC29.85■■■□□ 2.37
LTN1O94822 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC29.85■■■□□ 2.37
LTN1O94822 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC29.85■■■□□ 2.37
LTN1O94822 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC29.85■■■□□ 2.37
LTN1O94822 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC29.85■■■□□ 2.37
LTN1O94822 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC29.85■■■□□ 2.37
LTN1O94822 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC29.85■■■□□ 2.37
LTN1O94822 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC29.85■■■□□ 2.37
LTN1O94822 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC29.84■■■□□ 2.37
LTN1O94822 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC29.84■■■□□ 2.37
LTN1O94822 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC29.84■■■□□ 2.37
LTN1O94822 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC29.84■■■□□ 2.37
LTN1O94822 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC29.84■■■□□ 2.37
LTN1O94822 DENND3-207ENST00000518347 850 ntTSL 2 BASIC29.84■■■□□ 2.37
LTN1O94822 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC29.84■■■□□ 2.37
LTN1O94822 AC105233.4-201ENST00000642045 216 ntBASIC29.84■■■□□ 2.37
LTN1O94822 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC29.84■■■□□ 2.37
LTN1O94822 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC29.84■■■□□ 2.37
LTN1O94822 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC29.84■■■□□ 2.37
Retrieved 100 of 98,524 protein–RNA pairs in 15.6 ms