Protein–RNA interactions for Protein: O75954

TSPAN9, Tetraspanin-9, humanhuman

Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN9O75954 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC18.93■□□□□ 0.62
TSPAN9O75954 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TSPAN9O75954 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
TSPAN9O75954 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC18.93■□□□□ 0.62
TSPAN9O75954 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TSPAN9O75954 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TSPAN9O75954 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TSPAN9O75954 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TSPAN9O75954 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC18.93■□□□□ 0.62
TSPAN9O75954 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TSPAN9O75954 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
TSPAN9O75954 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC18.92■□□□□ 0.62
TSPAN9O75954 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC18.92■□□□□ 0.62
TSPAN9O75954 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC18.92■□□□□ 0.62
TSPAN9O75954 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC18.92■□□□□ 0.62
TSPAN9O75954 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
TSPAN9O75954 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
TSPAN9O75954 BX664725.1-201ENST00000438252 379 ntBASIC18.92■□□□□ 0.62
TSPAN9O75954 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
TSPAN9O75954 KRT125P-201ENST00000546827 989 ntBASIC18.92■□□□□ 0.62
TSPAN9O75954 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
TSPAN9O75954 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
TSPAN9O75954 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TSPAN9O75954 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC18.91■□□□□ 0.62
TSPAN9O75954 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC18.91■□□□□ 0.62
TSPAN9O75954 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC18.91■□□□□ 0.62
TSPAN9O75954 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
TSPAN9O75954 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
TSPAN9O75954 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
TSPAN9O75954 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC18.91■□□□□ 0.62
TSPAN9O75954 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TSPAN9O75954 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TSPAN9O75954 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC18.91■□□□□ 0.62
TSPAN9O75954 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
TSPAN9O75954 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
TSPAN9O75954 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC18.9■□□□□ 0.62
TSPAN9O75954 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC18.9■□□□□ 0.62
TSPAN9O75954 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
TSPAN9O75954 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
TSPAN9O75954 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC18.9■□□□□ 0.62
TSPAN9O75954 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC18.9■□□□□ 0.62
TSPAN9O75954 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC18.9■□□□□ 0.62
TSPAN9O75954 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
TSPAN9O75954 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
TSPAN9O75954 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC18.9■□□□□ 0.62
TSPAN9O75954 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
TSPAN9O75954 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC18.9■□□□□ 0.62
TSPAN9O75954 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC18.9■□□□□ 0.62
TSPAN9O75954 LINC01124-201ENST00000409786 2117 ntBASIC18.89■□□□□ 0.62
TSPAN9O75954 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
TSPAN9O75954 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
TSPAN9O75954 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC18.89■□□□□ 0.62
TSPAN9O75954 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
TSPAN9O75954 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC18.89■□□□□ 0.61
TSPAN9O75954 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
TSPAN9O75954 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
TSPAN9O75954 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
TSPAN9O75954 CREM-229ENST00000474362 1030 ntTSL 2 BASIC18.89■□□□□ 0.61
TSPAN9O75954 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
TSPAN9O75954 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
TSPAN9O75954 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
TSPAN9O75954 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC18.89■□□□□ 0.61
TSPAN9O75954 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC18.89■□□□□ 0.61
TSPAN9O75954 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
TSPAN9O75954 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
TSPAN9O75954 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TSPAN9O75954 DUSP8P3-201ENST00000399571 1760 ntBASIC18.88■□□□□ 0.61
TSPAN9O75954 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TSPAN9O75954 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
TSPAN9O75954 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TSPAN9O75954 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TSPAN9O75954 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC18.88■□□□□ 0.61
TSPAN9O75954 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
TSPAN9O75954 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
TSPAN9O75954 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TSPAN9O75954 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
TSPAN9O75954 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
TSPAN9O75954 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
TSPAN9O75954 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TSPAN9O75954 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC18.88■□□□□ 0.61
TSPAN9O75954 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
TSPAN9O75954 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC18.87■□□□□ 0.61
TSPAN9O75954 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
TSPAN9O75954 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
TSPAN9O75954 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
TSPAN9O75954 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
TSPAN9O75954 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
TSPAN9O75954 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC18.87■□□□□ 0.61
TSPAN9O75954 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC18.87■□□□□ 0.61
TSPAN9O75954 AC137630.3-201ENST00000607245 391 ntBASIC18.87■□□□□ 0.61
TSPAN9O75954 MIR4787-201ENST00000607364 84 ntBASIC18.87■□□□□ 0.61
TSPAN9O75954 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
TSPAN9O75954 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
TSPAN9O75954 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
TSPAN9O75954 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TSPAN9O75954 WWC2-AS2-201ENST00000578387 2183 ntBASIC18.86■□□□□ 0.61
TSPAN9O75954 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
TSPAN9O75954 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC18.86■□□□□ 0.61
TSPAN9O75954 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC18.86■□□□□ 0.61
TSPAN9O75954 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 26.6 ms