Protein–RNA interactions for Protein: O75643

SNRNP200, U5 small nuclear ribonucleoprotein 200 kDa helicase, humanhuman

Known RBP Predictions only

Length 2,136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200O75643 ZNRF2P3-201ENST00000424200 374 ntBASIC21.38■■□□□ 1.01
SNRNP200O75643 CASK-201ENST00000378154 2494 ntTSL 5 BASIC21.38■■□□□ 1.01
SNRNP200O75643 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
SNRNP200O75643 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC21.38■■□□□ 1.01
SNRNP200O75643 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
SNRNP200O75643 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
SNRNP200O75643 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC21.38■■□□□ 1.01
SNRNP200O75643 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
SNRNP200O75643 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC21.38■■□□□ 1.01
SNRNP200O75643 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC21.38■■□□□ 1.01
SNRNP200O75643 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
SNRNP200O75643 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC21.38■■□□□ 1.01
SNRNP200O75643 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC21.37■■□□□ 1.01
SNRNP200O75643 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
SNRNP200O75643 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC21.37■■□□□ 1.01
SNRNP200O75643 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
SNRNP200O75643 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC21.37■■□□□ 1.01
SNRNP200O75643 C9orf163-202ENST00000624034 2573 ntBASIC21.37■■□□□ 1.01
SNRNP200O75643 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
SNRNP200O75643 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
SNRNP200O75643 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC21.36■■□□□ 1.01
SNRNP200O75643 AC133637.1-201ENST00000624115 1537 ntBASIC21.36■■□□□ 1.01
SNRNP200O75643 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
SNRNP200O75643 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
SNRNP200O75643 AC004687.1-201ENST00000579003 1625 ntBASIC21.36■■□□□ 1.01
SNRNP200O75643 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
SNRNP200O75643 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
SNRNP200O75643 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC21.36■■□□□ 1.01
SNRNP200O75643 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
SNRNP200O75643 AC136469.2-201ENST00000623944 1028 ntBASIC21.36■■□□□ 1.01
SNRNP200O75643 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC21.36■■□□□ 1.01
SNRNP200O75643 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
SNRNP200O75643 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC21.36■■□□□ 1.01
SNRNP200O75643 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC21.36■■□□□ 1.01
SNRNP200O75643 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
SNRNP200O75643 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
SNRNP200O75643 AL499627.2-201ENST00000606283 725 ntBASIC21.35■■□□□ 1.01
SNRNP200O75643 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
SNRNP200O75643 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
SNRNP200O75643 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
SNRNP200O75643 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC21.35■■□□□ 1.01
SNRNP200O75643 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC21.35■■□□□ 1.01
SNRNP200O75643 MIR939-201ENST00000401314 82 ntBASIC21.35■■□□□ 1.01
SNRNP200O75643 pRNA.6-201ENST00000610482 90 ntBASIC21.35■■□□□ 1.01
SNRNP200O75643 pRNA.5-201ENST00000612139 90 ntBASIC21.35■■□□□ 1.01
SNRNP200O75643 pRNA.11-201ENST00000618423 90 ntBASIC21.35■■□□□ 1.01
SNRNP200O75643 pRNA.13-201ENST00000619112 90 ntBASIC21.35■■□□□ 1.01
SNRNP200O75643 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
SNRNP200O75643 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
SNRNP200O75643 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
SNRNP200O75643 AL353803.4-201ENST00000565882 1934 ntBASIC21.34■■□□□ 1.01
SNRNP200O75643 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
SNRNP200O75643 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC21.34■■□□□ 1.01
SNRNP200O75643 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC21.34■■□□□ 1.01
SNRNP200O75643 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
SNRNP200O75643 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
SNRNP200O75643 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
SNRNP200O75643 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
SNRNP200O75643 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC21.34■■□□□ 1.01
SNRNP200O75643 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC21.34■■□□□ 1.01
SNRNP200O75643 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC21.34■■□□□ 1.01
SNRNP200O75643 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC21.34■■□□□ 1.01
SNRNP200O75643 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
SNRNP200O75643 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
SNRNP200O75643 LINC01529-204ENST00000636474 1715 ntBASIC21.34■■□□□ 1.01
SNRNP200O75643 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC21.33■■□□□ 1.01
SNRNP200O75643 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1.01
SNRNP200O75643 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
SNRNP200O75643 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
SNRNP200O75643 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
SNRNP200O75643 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC21.33■■□□□ 1
SNRNP200O75643 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC21.33■■□□□ 1
SNRNP200O75643 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
SNRNP200O75643 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC21.33■■□□□ 1
SNRNP200O75643 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC21.33■■□□□ 1
SNRNP200O75643 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC21.33■■□□□ 1
SNRNP200O75643 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC21.33■■□□□ 1
SNRNP200O75643 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC21.33■■□□□ 1
SNRNP200O75643 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC21.33■■□□□ 1
SNRNP200O75643 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC21.33■■□□□ 1
SNRNP200O75643 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC21.32■■□□□ 1
SNRNP200O75643 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
SNRNP200O75643 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
SNRNP200O75643 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC21.32■■□□□ 1
SNRNP200O75643 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
SNRNP200O75643 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
SNRNP200O75643 AGAP1-202ENST00000336665 5427 ntAPPRIS P3 TSL 1 (best) BASIC21.32■■□□□ 1
SNRNP200O75643 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
SNRNP200O75643 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
SNRNP200O75643 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
SNRNP200O75643 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC21.32■■□□□ 1
SNRNP200O75643 DUX4L4-201ENST00000566884 1269 ntBASIC21.32■■□□□ 1
SNRNP200O75643 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
SNRNP200O75643 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC21.32■■□□□ 1
SNRNP200O75643 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
SNRNP200O75643 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
SNRNP200O75643 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC21.32■■□□□ 1
SNRNP200O75643 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC21.32■■□□□ 1
SNRNP200O75643 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC21.31■■□□□ 1
SNRNP200O75643 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC21.31■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 19.9 ms