Protein–RNA interactions for Protein: O60716

CTNND1, Catenin delta-1, humanhuman

Known RBP Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1O60716 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC26.2■■□□□ 1.78
CTNND1O60716 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC26.2■■□□□ 1.78
CTNND1O60716 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC26.2■■□□□ 1.78
CTNND1O60716 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC26.2■■□□□ 1.78
CTNND1O60716 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC26.2■■□□□ 1.78
CTNND1O60716 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC26.19■■□□□ 1.78
CTNND1O60716 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
CTNND1O60716 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
CTNND1O60716 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
CTNND1O60716 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
CTNND1O60716 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
CTNND1O60716 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC26.19■■□□□ 1.78
CTNND1O60716 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC26.19■■□□□ 1.78
CTNND1O60716 KRT18P14-201ENST00000534205 1250 ntBASIC26.19■■□□□ 1.78
CTNND1O60716 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
CTNND1O60716 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC26.19■■□□□ 1.78
CTNND1O60716 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC26.19■■□□□ 1.78
CTNND1O60716 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
CTNND1O60716 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
CTNND1O60716 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
CTNND1O60716 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC26.18■■□□□ 1.78
CTNND1O60716 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC26.18■■□□□ 1.78
CTNND1O60716 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
CTNND1O60716 STX4-202ENST00000394998 1498 ntTSL 2 BASIC26.18■■□□□ 1.78
CTNND1O60716 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
CTNND1O60716 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC26.18■■□□□ 1.78
CTNND1O60716 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC26.18■■□□□ 1.78
CTNND1O60716 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC26.18■■□□□ 1.78
CTNND1O60716 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC26.18■■□□□ 1.78
CTNND1O60716 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC26.18■■□□□ 1.78
CTNND1O60716 NTF6G-201ENST00000591094 616 ntBASIC26.18■■□□□ 1.78
CTNND1O60716 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC26.18■■□□□ 1.78
CTNND1O60716 MED17-227ENST00000640521 2047 ntTSL 5 BASIC26.18■■□□□ 1.78
CTNND1O60716 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
CTNND1O60716 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
CTNND1O60716 MPST-204ENST00000404393 1329 ntTSL 5 BASIC26.17■■□□□ 1.78
CTNND1O60716 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC26.17■■□□□ 1.78
CTNND1O60716 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
CTNND1O60716 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC26.17■■□□□ 1.78
CTNND1O60716 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
CTNND1O60716 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC26.17■■□□□ 1.78
CTNND1O60716 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
CTNND1O60716 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC26.17■■□□□ 1.78
CTNND1O60716 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
CTNND1O60716 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
CTNND1O60716 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
CTNND1O60716 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC26.16■■□□□ 1.78
CTNND1O60716 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC26.16■■□□□ 1.78
CTNND1O60716 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC26.16■■□□□ 1.78
CTNND1O60716 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
CTNND1O60716 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC26.16■■□□□ 1.78
CTNND1O60716 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC26.16■■□□□ 1.78
CTNND1O60716 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
CTNND1O60716 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC26.15■■□□□ 1.78
CTNND1O60716 EED-207ENST00000528180 1745 ntTSL 5 BASIC26.15■■□□□ 1.78
CTNND1O60716 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC26.15■■□□□ 1.78
CTNND1O60716 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC26.15■■□□□ 1.78
CTNND1O60716 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC26.15■■□□□ 1.78
CTNND1O60716 GXYLT1P2-201ENST00000433312 1230 ntBASIC26.15■■□□□ 1.78
CTNND1O60716 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC26.15■■□□□ 1.78
CTNND1O60716 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC26.15■■□□□ 1.78
CTNND1O60716 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
CTNND1O60716 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
CTNND1O60716 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC26.15■■□□□ 1.78
CTNND1O60716 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC26.14■■□□□ 1.78
CTNND1O60716 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC26.14■■□□□ 1.78
CTNND1O60716 NT5C3AP1-201ENST00000394500 1012 ntBASIC26.14■■□□□ 1.78
CTNND1O60716 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC26.14■■□□□ 1.78
CTNND1O60716 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC26.14■■□□□ 1.77
CTNND1O60716 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC26.14■■□□□ 1.77
CTNND1O60716 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC26.13■■□□□ 1.77
CTNND1O60716 AC004911.1-201ENST00000416316 871 ntBASIC26.13■■□□□ 1.77
CTNND1O60716 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC26.13■■□□□ 1.77
CTNND1O60716 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC26.13■■□□□ 1.77
CTNND1O60716 AC105233.4-201ENST00000642045 216 ntBASIC26.13■■□□□ 1.77
CTNND1O60716 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
CTNND1O60716 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
CTNND1O60716 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC26.13■■□□□ 1.77
CTNND1O60716 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
CTNND1O60716 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC26.13■■□□□ 1.77
CTNND1O60716 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC26.12■■□□□ 1.77
CTNND1O60716 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC26.12■■□□□ 1.77
CTNND1O60716 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
CTNND1O60716 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC26.12■■□□□ 1.77
CTNND1O60716 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
CTNND1O60716 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC26.12■■□□□ 1.77
CTNND1O60716 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC26.12■■□□□ 1.77
CTNND1O60716 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC26.12■■□□□ 1.77
CTNND1O60716 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC26.12■■□□□ 1.77
CTNND1O60716 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
CTNND1O60716 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC26.11■■□□□ 1.77
CTNND1O60716 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC26.11■■□□□ 1.77
CTNND1O60716 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
CTNND1O60716 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC26.11■■□□□ 1.77
CTNND1O60716 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC26.11■■□□□ 1.77
CTNND1O60716 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC26.11■■□□□ 1.77
CTNND1O60716 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
CTNND1O60716 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC26.11■■□□□ 1.77
CTNND1O60716 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC26.11■■□□□ 1.77
CTNND1O60716 DLX3-202ENST00000512495 834 ntTSL 2 BASIC26.11■■□□□ 1.77
Retrieved 100 of 98,524 protein–RNA pairs in 20.3 ms