Protein–RNA interactions for Protein: O60330

PCDHGA12, Protocadherin gamma-A12, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA12O60330 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC22.03■■□□□ 1.12
PCDHGA12O60330 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
PCDHGA12O60330 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
PCDHGA12O60330 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC22.03■■□□□ 1.12
PCDHGA12O60330 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
PCDHGA12O60330 MIR572-201ENST00000384983 95 ntBASIC22.03■■□□□ 1.12
PCDHGA12O60330 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC22.03■■□□□ 1.12
PCDHGA12O60330 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC22.03■■□□□ 1.12
PCDHGA12O60330 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC22.03■■□□□ 1.12
PCDHGA12O60330 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC22.03■■□□□ 1.12
PCDHGA12O60330 ALDH1A3-203ENST00000557963 1670 ntBASIC22.03■■□□□ 1.12
PCDHGA12O60330 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC22.03■■□□□ 1.12
PCDHGA12O60330 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
PCDHGA12O60330 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC22.03■■□□□ 1.12
PCDHGA12O60330 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
PCDHGA12O60330 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
PCDHGA12O60330 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC22.03■■□□□ 1.12
PCDHGA12O60330 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
PCDHGA12O60330 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC22.02■■□□□ 1.12
PCDHGA12O60330 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC22.02■■□□□ 1.12
PCDHGA12O60330 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC22.02■■□□□ 1.12
PCDHGA12O60330 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC22.02■■□□□ 1.12
PCDHGA12O60330 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
PCDHGA12O60330 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC22.02■■□□□ 1.12
PCDHGA12O60330 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC22.02■■□□□ 1.12
PCDHGA12O60330 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
PCDHGA12O60330 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
PCDHGA12O60330 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.11
PCDHGA12O60330 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC22.01■■□□□ 1.11
PCDHGA12O60330 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
PCDHGA12O60330 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC22.01■■□□□ 1.11
PCDHGA12O60330 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
PCDHGA12O60330 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC22.01■■□□□ 1.11
PCDHGA12O60330 AL354811.1-201ENST00000610286 706 ntBASIC22.01■■□□□ 1.11
PCDHGA12O60330 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC22.01■■□□□ 1.11
PCDHGA12O60330 AC092437.1-201ENST00000624794 1048 ntBASIC22.01■■□□□ 1.11
PCDHGA12O60330 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC22.01■■□□□ 1.11
PCDHGA12O60330 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
PCDHGA12O60330 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC22■■□□□ 1.11
PCDHGA12O60330 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC22■■□□□ 1.11
PCDHGA12O60330 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
PCDHGA12O60330 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC22■■□□□ 1.11
PCDHGA12O60330 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC22■■□□□ 1.11
PCDHGA12O60330 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC22■■□□□ 1.11
PCDHGA12O60330 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC22■■□□□ 1.11
PCDHGA12O60330 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
PCDHGA12O60330 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC21.99■■□□□ 1.11
PCDHGA12O60330 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC21.99■■□□□ 1.11
PCDHGA12O60330 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC21.99■■□□□ 1.11
PCDHGA12O60330 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC21.99■■□□□ 1.11
PCDHGA12O60330 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC21.99■■□□□ 1.11
PCDHGA12O60330 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC21.99■■□□□ 1.11
PCDHGA12O60330 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC21.99■■□□□ 1.11
PCDHGA12O60330 AC012414.1-201ENST00000556676 535 ntBASIC21.99■■□□□ 1.11
PCDHGA12O60330 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC21.99■■□□□ 1.11
PCDHGA12O60330 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
PCDHGA12O60330 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC21.99■■□□□ 1.11
PCDHGA12O60330 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC21.99■■□□□ 1.11
PCDHGA12O60330 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC21.99■■□□□ 1.11
PCDHGA12O60330 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC21.99■■□□□ 1.11
PCDHGA12O60330 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
PCDHGA12O60330 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC21.98■■□□□ 1.11
PCDHGA12O60330 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC21.98■■□□□ 1.11
PCDHGA12O60330 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC21.98■■□□□ 1.11
PCDHGA12O60330 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC21.98■■□□□ 1.11
PCDHGA12O60330 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC21.98■■□□□ 1.11
PCDHGA12O60330 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
PCDHGA12O60330 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
PCDHGA12O60330 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC21.97■■□□□ 1.11
PCDHGA12O60330 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC21.97■■□□□ 1.11
PCDHGA12O60330 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC21.97■■□□□ 1.11
PCDHGA12O60330 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC21.97■■□□□ 1.11
PCDHGA12O60330 HLA-L-211ENST00000482052 1765 ntBASIC21.97■■□□□ 1.11
PCDHGA12O60330 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC21.97■■□□□ 1.11
PCDHGA12O60330 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC21.97■■□□□ 1.11
PCDHGA12O60330 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC21.97■■□□□ 1.11
PCDHGA12O60330 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC21.97■■□□□ 1.11
PCDHGA12O60330 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC21.97■■□□□ 1.11
PCDHGA12O60330 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC21.97■■□□□ 1.11
PCDHGA12O60330 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
PCDHGA12O60330 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC21.97■■□□□ 1.11
PCDHGA12O60330 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
PCDHGA12O60330 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
PCDHGA12O60330 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC21.96■■□□□ 1.11
PCDHGA12O60330 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
PCDHGA12O60330 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC21.96■■□□□ 1.11
PCDHGA12O60330 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
PCDHGA12O60330 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC21.96■■□□□ 1.11
PCDHGA12O60330 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
PCDHGA12O60330 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
PCDHGA12O60330 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
PCDHGA12O60330 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
PCDHGA12O60330 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC21.96■■□□□ 1.11
PCDHGA12O60330 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
PCDHGA12O60330 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
PCDHGA12O60330 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
PCDHGA12O60330 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.11
PCDHGA12O60330 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC21.95■■□□□ 1.1
PCDHGA12O60330 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
PCDHGA12O60330 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
Retrieved 100 of 98,524 protein–RNA pairs in 16.3 ms