Protein–RNA interactions for Protein: O43189

PHF1, PHD finger protein 1, humanhuman

Predicted RBP Predictions only

Length 567 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1O43189 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC19.07■□□□□ 0.64
PHF1O43189 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC19.07■□□□□ 0.64
PHF1O43189 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
PHF1O43189 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC19.07■□□□□ 0.64
PHF1O43189 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
PHF1O43189 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC19.07■□□□□ 0.64
PHF1O43189 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
PHF1O43189 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
PHF1O43189 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
PHF1O43189 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
PHF1O43189 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
PHF1O43189 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC19.07■□□□□ 0.64
PHF1O43189 AL022069.1-201ENST00000568025 1636 ntBASIC19.07■□□□□ 0.64
PHF1O43189 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
PHF1O43189 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
PHF1O43189 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
PHF1O43189 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC19.06■□□□□ 0.64
PHF1O43189 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
PHF1O43189 EDA-201ENST00000338901 1233 ntBASIC19.06■□□□□ 0.64
PHF1O43189 STK32C-205ENST00000456004 607 ntTSL 2 BASIC19.06■□□□□ 0.64
PHF1O43189 AL355001.2-201ENST00000620617 1191 ntBASIC19.06■□□□□ 0.64
PHF1O43189 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC19.06■□□□□ 0.64
PHF1O43189 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC19.06■□□□□ 0.64
PHF1O43189 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC19.06■□□□□ 0.64
PHF1O43189 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
PHF1O43189 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
PHF1O43189 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
PHF1O43189 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
PHF1O43189 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
PHF1O43189 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC19.05■□□□□ 0.64
PHF1O43189 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
PHF1O43189 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC19.05■□□□□ 0.64
PHF1O43189 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC19.05■□□□□ 0.64
PHF1O43189 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
PHF1O43189 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC19.05■□□□□ 0.64
PHF1O43189 MIR6821-201ENST00000617625 74 ntBASIC19.05■□□□□ 0.64
PHF1O43189 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
PHF1O43189 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
PHF1O43189 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
PHF1O43189 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
PHF1O43189 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
PHF1O43189 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC19.05■□□□□ 0.64
PHF1O43189 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
PHF1O43189 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
PHF1O43189 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
PHF1O43189 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
PHF1O43189 GALC-202ENST00000393568 2054 ntTSL 2 BASIC19.04■□□□□ 0.64
PHF1O43189 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
PHF1O43189 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
PHF1O43189 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
PHF1O43189 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
PHF1O43189 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC19.04■□□□□ 0.64
PHF1O43189 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC19.04■□□□□ 0.64
PHF1O43189 AL117328.2-201ENST00000624617 1940 ntBASIC19.04■□□□□ 0.64
PHF1O43189 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC19.03■□□□□ 0.64
PHF1O43189 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
PHF1O43189 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
PHF1O43189 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
PHF1O43189 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
PHF1O43189 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
PHF1O43189 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
PHF1O43189 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
PHF1O43189 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
PHF1O43189 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
PHF1O43189 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
PHF1O43189 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
PHF1O43189 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
PHF1O43189 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
PHF1O43189 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
PHF1O43189 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
PHF1O43189 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC19.02■□□□□ 0.64
PHF1O43189 AL162430.1-201ENST00000480705 870 ntBASIC19.02■□□□□ 0.64
PHF1O43189 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC19.02■□□□□ 0.64
PHF1O43189 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
PHF1O43189 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC19.02■□□□□ 0.64
PHF1O43189 REST-206ENST00000612429 1376 ntTSL 5 BASIC19.02■□□□□ 0.64
PHF1O43189 REST-207ENST00000616975 1370 ntTSL 5 BASIC19.02■□□□□ 0.64
PHF1O43189 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
PHF1O43189 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
PHF1O43189 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.63
PHF1O43189 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC19.01■□□□□ 0.63
PHF1O43189 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
PHF1O43189 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
PHF1O43189 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
PHF1O43189 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
PHF1O43189 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC19.01■□□□□ 0.63
PHF1O43189 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
PHF1O43189 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
PHF1O43189 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
PHF1O43189 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
PHF1O43189 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
PHF1O43189 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
PHF1O43189 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
PHF1O43189 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
PHF1O43189 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
PHF1O43189 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
PHF1O43189 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC19■□□□□ 0.63
PHF1O43189 AC005703.6-201ENST00000623265 1329 ntBASIC19■□□□□ 0.63
PHF1O43189 CLDN5-201ENST00000403084 2357 ntBASIC19■□□□□ 0.63
PHF1O43189 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 22.1 ms