Protein–RNA interactions for Protein: O14562

UBFD1, Ubiquitin domain-containing protein UBFD1, humanhuman

Known RBP Predictions only

Length 309 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1O14562 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC21.65■■□□□ 1.06
UBFD1O14562 AC139530.1-201ENST00000575312 1977 ntBASIC21.65■■□□□ 1.06
UBFD1O14562 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
UBFD1O14562 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
UBFD1O14562 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC21.64■■□□□ 1.06
UBFD1O14562 WWC2-AS2-201ENST00000578387 2183 ntBASIC21.64■■□□□ 1.06
UBFD1O14562 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC21.64■■□□□ 1.05
UBFD1O14562 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC21.64■■□□□ 1.05
UBFD1O14562 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
UBFD1O14562 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
UBFD1O14562 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
UBFD1O14562 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC21.64■■□□□ 1.05
UBFD1O14562 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
UBFD1O14562 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
UBFD1O14562 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
UBFD1O14562 AC087742.1-201ENST00000575880 1738 ntBASIC21.63■■□□□ 1.05
UBFD1O14562 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC21.63■■□□□ 1.05
UBFD1O14562 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC21.63■■□□□ 1.05
UBFD1O14562 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
UBFD1O14562 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC21.63■■□□□ 1.05
UBFD1O14562 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC21.63■■□□□ 1.05
UBFD1O14562 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC21.63■■□□□ 1.05
UBFD1O14562 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC21.63■■□□□ 1.05
UBFD1O14562 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
UBFD1O14562 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC21.63■■□□□ 1.05
UBFD1O14562 AC080038.3-201ENST00000623346 1952 ntBASIC21.63■■□□□ 1.05
UBFD1O14562 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
UBFD1O14562 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC21.63■■□□□ 1.05
UBFD1O14562 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC21.62■■□□□ 1.05
UBFD1O14562 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC21.62■■□□□ 1.05
UBFD1O14562 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
UBFD1O14562 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC21.62■■□□□ 1.05
UBFD1O14562 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
UBFD1O14562 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC21.62■■□□□ 1.05
UBFD1O14562 AL031848.2-201ENST00000607670 837 ntBASIC21.62■■□□□ 1.05
UBFD1O14562 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
UBFD1O14562 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC21.62■■□□□ 1.05
UBFD1O14562 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC21.61■■□□□ 1.05
UBFD1O14562 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC21.61■■□□□ 1.05
UBFD1O14562 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC21.61■■□□□ 1.05
UBFD1O14562 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC21.61■■□□□ 1.05
UBFD1O14562 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC21.61■■□□□ 1.05
UBFD1O14562 CLTA-210ENST00000540080 989 ntTSL 2 BASIC21.61■■□□□ 1.05
UBFD1O14562 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
UBFD1O14562 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
UBFD1O14562 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC21.61■■□□□ 1.05
UBFD1O14562 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC21.6■■□□□ 1.05
UBFD1O14562 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
UBFD1O14562 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC21.6■■□□□ 1.05
UBFD1O14562 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
UBFD1O14562 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC21.6■■□□□ 1.05
UBFD1O14562 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
UBFD1O14562 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC21.6■■□□□ 1.05
UBFD1O14562 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC21.6■■□□□ 1.05
UBFD1O14562 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
UBFD1O14562 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
UBFD1O14562 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC21.6■■□□□ 1.05
UBFD1O14562 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
UBFD1O14562 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
UBFD1O14562 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC21.6■■□□□ 1.05
UBFD1O14562 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
UBFD1O14562 AC021242.3-201ENST00000607598 1377 ntBASIC21.6■■□□□ 1.05
UBFD1O14562 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
UBFD1O14562 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
UBFD1O14562 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
UBFD1O14562 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC21.59■■□□□ 1.05
UBFD1O14562 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
UBFD1O14562 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
UBFD1O14562 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
UBFD1O14562 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC21.59■■□□□ 1.05
UBFD1O14562 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
UBFD1O14562 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC21.59■■□□□ 1.05
UBFD1O14562 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC21.59■■□□□ 1.05
UBFD1O14562 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC21.59■■□□□ 1.05
UBFD1O14562 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
UBFD1O14562 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
UBFD1O14562 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC21.59■■□□□ 1.05
UBFD1O14562 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
UBFD1O14562 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC21.59■■□□□ 1.05
UBFD1O14562 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC21.59■■□□□ 1.05
UBFD1O14562 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC21.59■■□□□ 1.05
UBFD1O14562 AC137767.1-201ENST00000602918 1920 ntBASIC21.59■■□□□ 1.05
UBFD1O14562 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC21.58■■□□□ 1.05
UBFD1O14562 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
UBFD1O14562 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC21.58■■□□□ 1.05
UBFD1O14562 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.05
UBFD1O14562 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
UBFD1O14562 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
UBFD1O14562 MIR6722-201ENST00000617286 78 ntBASIC21.58■■□□□ 1.05
UBFD1O14562 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC21.58■■□□□ 1.05
UBFD1O14562 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC21.58■■□□□ 1.04
UBFD1O14562 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
UBFD1O14562 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
UBFD1O14562 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
UBFD1O14562 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC21.58■■□□□ 1.04
UBFD1O14562 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC21.58■■□□□ 1.04
UBFD1O14562 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC21.57■■□□□ 1.04
UBFD1O14562 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC21.57■■□□□ 1.04
UBFD1O14562 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
UBFD1O14562 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 25.1 ms