Protein–RNA interactions for Protein: A6NKF7

TMEM88B, Transmembrane protein 88B, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88BA6NKF7 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC26.38■■□□□ 1.81
TMEM88BA6NKF7 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC26.38■■□□□ 1.81
TMEM88BA6NKF7 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC26.38■■□□□ 1.81
TMEM88BA6NKF7 AC231657.2-201ENST00000624556 255 ntBASIC26.38■■□□□ 1.81
TMEM88BA6NKF7 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC26.38■■□□□ 1.81
TMEM88BA6NKF7 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC26.37■■□□□ 1.81
TMEM88BA6NKF7 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC26.37■■□□□ 1.81
TMEM88BA6NKF7 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC26.37■■□□□ 1.81
TMEM88BA6NKF7 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
TMEM88BA6NKF7 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
TMEM88BA6NKF7 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
TMEM88BA6NKF7 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
TMEM88BA6NKF7 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC26.36■■□□□ 1.81
TMEM88BA6NKF7 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
TMEM88BA6NKF7 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC26.36■■□□□ 1.81
TMEM88BA6NKF7 AC005181.1-201ENST00000604782 1256 ntBASIC26.36■■□□□ 1.81
TMEM88BA6NKF7 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
TMEM88BA6NKF7 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
TMEM88BA6NKF7 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC26.35■■□□□ 1.81
TMEM88BA6NKF7 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
TMEM88BA6NKF7 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC26.35■■□□□ 1.81
TMEM88BA6NKF7 AC073210.2-201ENST00000430369 194 ntBASIC26.35■■□□□ 1.81
TMEM88BA6NKF7 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC26.35■■□□□ 1.81
TMEM88BA6NKF7 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC26.35■■□□□ 1.81
TMEM88BA6NKF7 BX005040.4-201ENST00000637145 1518 ntBASIC26.34■■□□□ 1.81
TMEM88BA6NKF7 RARA-203ENST00000394086 2008 ntTSL 2 BASIC26.34■■□□□ 1.81
TMEM88BA6NKF7 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC26.34■■□□□ 1.81
TMEM88BA6NKF7 PRORSD1P-201ENST00000295112 541 ntBASIC26.34■■□□□ 1.81
TMEM88BA6NKF7 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC26.34■■□□□ 1.81
TMEM88BA6NKF7 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC26.34■■□□□ 1.81
TMEM88BA6NKF7 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
TMEM88BA6NKF7 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC26.34■■□□□ 1.81
TMEM88BA6NKF7 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC26.34■■□□□ 1.81
TMEM88BA6NKF7 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC26.34■■□□□ 1.81
TMEM88BA6NKF7 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC26.34■■□□□ 1.81
TMEM88BA6NKF7 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC26.34■■□□□ 1.81
TMEM88BA6NKF7 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC26.34■■□□□ 1.81
TMEM88BA6NKF7 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
TMEM88BA6NKF7 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC26.34■■□□□ 1.81
TMEM88BA6NKF7 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
TMEM88BA6NKF7 AC007322.1-201ENST00000426983 750 ntBASIC26.33■■□□□ 1.81
TMEM88BA6NKF7 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC26.33■■□□□ 1.81
TMEM88BA6NKF7 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC26.33■■□□□ 1.81
TMEM88BA6NKF7 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC26.33■■□□□ 1.81
TMEM88BA6NKF7 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC26.33■■□□□ 1.8
TMEM88BA6NKF7 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
TMEM88BA6NKF7 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC26.32■■□□□ 1.8
TMEM88BA6NKF7 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
TMEM88BA6NKF7 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
TMEM88BA6NKF7 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC26.32■■□□□ 1.8
TMEM88BA6NKF7 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC26.32■■□□□ 1.8
TMEM88BA6NKF7 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC26.32■■□□□ 1.8
TMEM88BA6NKF7 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC26.32■■□□□ 1.8
TMEM88BA6NKF7 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC26.32■■□□□ 1.8
TMEM88BA6NKF7 AP006294.2-201ENST00000641667 209 ntBASIC26.32■■□□□ 1.8
TMEM88BA6NKF7 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC26.32■■□□□ 1.8
TMEM88BA6NKF7 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC26.32■■□□□ 1.8
TMEM88BA6NKF7 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
TMEM88BA6NKF7 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC26.32■■□□□ 1.8
TMEM88BA6NKF7 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
TMEM88BA6NKF7 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC26.31■■□□□ 1.8
TMEM88BA6NKF7 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
TMEM88BA6NKF7 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
TMEM88BA6NKF7 RPS2P52-201ENST00000469610 820 ntBASIC26.31■■□□□ 1.8
TMEM88BA6NKF7 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC26.31■■□□□ 1.8
TMEM88BA6NKF7 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC26.31■■□□□ 1.8
TMEM88BA6NKF7 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC26.3■■□□□ 1.8
TMEM88BA6NKF7 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
TMEM88BA6NKF7 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
TMEM88BA6NKF7 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC26.3■■□□□ 1.8
TMEM88BA6NKF7 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
TMEM88BA6NKF7 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC26.3■■□□□ 1.8
TMEM88BA6NKF7 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC26.29■■□□□ 1.8
TMEM88BA6NKF7 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC26.29■■□□□ 1.8
TMEM88BA6NKF7 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
TMEM88BA6NKF7 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC26.29■■□□□ 1.8
TMEM88BA6NKF7 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC26.29■■□□□ 1.8
TMEM88BA6NKF7 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC26.29■■□□□ 1.8
TMEM88BA6NKF7 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC26.29■■□□□ 1.8
TMEM88BA6NKF7 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC26.29■■□□□ 1.8
TMEM88BA6NKF7 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC26.29■■□□□ 1.8
TMEM88BA6NKF7 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC26.29■■□□□ 1.8
TMEM88BA6NKF7 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
TMEM88BA6NKF7 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC26.29■■□□□ 1.8
TMEM88BA6NKF7 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC26.29■■□□□ 1.8
TMEM88BA6NKF7 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
TMEM88BA6NKF7 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC26.29■■□□□ 1.8
TMEM88BA6NKF7 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
TMEM88BA6NKF7 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC26.28■■□□□ 1.8
TMEM88BA6NKF7 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
TMEM88BA6NKF7 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC26.28■■□□□ 1.8
TMEM88BA6NKF7 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC26.28■■□□□ 1.8
TMEM88BA6NKF7 DUX4L16-201ENST00000555130 1264 ntBASIC26.28■■□□□ 1.8
TMEM88BA6NKF7 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC26.28■■□□□ 1.8
TMEM88BA6NKF7 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC26.28■■□□□ 1.8
TMEM88BA6NKF7 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
TMEM88BA6NKF7 CD37-213ENST00000598095 1598 ntTSL 2 BASIC26.28■■□□□ 1.8
TMEM88BA6NKF7 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC26.28■■□□□ 1.8
TMEM88BA6NKF7 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
TMEM88BA6NKF7 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
Retrieved 100 of 98,524 protein–RNA pairs in 24.1 ms