Protein–RNA interactions for Protein: A6NFN3

RBFOX3, RNA binding protein fox-1 homolog 3, humanhuman

Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX3A6NFN3 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
RBFOX3A6NFN3 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC17.54■□□□□ 0.4
RBFOX3A6NFN3 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
RBFOX3A6NFN3 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC17.54■□□□□ 0.4
RBFOX3A6NFN3 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
RBFOX3A6NFN3 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
RBFOX3A6NFN3 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC17.54■□□□□ 0.4
RBFOX3A6NFN3 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
RBFOX3A6NFN3 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC17.54■□□□□ 0.4
RBFOX3A6NFN3 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
RBFOX3A6NFN3 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RBFOX3A6NFN3 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
RBFOX3A6NFN3 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
RBFOX3A6NFN3 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RBFOX3A6NFN3 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RBFOX3A6NFN3 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
RBFOX3A6NFN3 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RBFOX3A6NFN3 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RBFOX3A6NFN3 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RBFOX3A6NFN3 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RBFOX3A6NFN3 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
RBFOX3A6NFN3 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
RBFOX3A6NFN3 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RBFOX3A6NFN3 AC021231.2-201ENST00000594613 730 ntBASIC17.53■□□□□ 0.4
RBFOX3A6NFN3 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
RBFOX3A6NFN3 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
RBFOX3A6NFN3 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
RBFOX3A6NFN3 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
RBFOX3A6NFN3 CD37-213ENST00000598095 1598 ntTSL 2 BASIC17.53■□□□□ 0.4
RBFOX3A6NFN3 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC17.53■□□□□ 0.4
RBFOX3A6NFN3 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
RBFOX3A6NFN3 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RBFOX3A6NFN3 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
RBFOX3A6NFN3 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
RBFOX3A6NFN3 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
RBFOX3A6NFN3 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC17.52■□□□□ 0.4
RBFOX3A6NFN3 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
RBFOX3A6NFN3 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
RBFOX3A6NFN3 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.39
RBFOX3A6NFN3 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.39
RBFOX3A6NFN3 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.39
RBFOX3A6NFN3 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC17.52■□□□□ 0.39
RBFOX3A6NFN3 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.39
RBFOX3A6NFN3 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC17.52■□□□□ 0.39
RBFOX3A6NFN3 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
RBFOX3A6NFN3 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
RBFOX3A6NFN3 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
RBFOX3A6NFN3 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
RBFOX3A6NFN3 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC17.51■□□□□ 0.39
RBFOX3A6NFN3 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
RBFOX3A6NFN3 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
RBFOX3A6NFN3 CHST11-202ENST00000546689 756 ntTSL 2 BASIC17.51■□□□□ 0.39
RBFOX3A6NFN3 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
RBFOX3A6NFN3 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC17.51■□□□□ 0.39
RBFOX3A6NFN3 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
RBFOX3A6NFN3 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC17.51■□□□□ 0.39
RBFOX3A6NFN3 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC17.5■□□□□ 0.39
RBFOX3A6NFN3 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RBFOX3A6NFN3 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RBFOX3A6NFN3 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
RBFOX3A6NFN3 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RBFOX3A6NFN3 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
RBFOX3A6NFN3 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
RBFOX3A6NFN3 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
RBFOX3A6NFN3 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC17.5■□□□□ 0.39
RBFOX3A6NFN3 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RBFOX3A6NFN3 AC126177.7-201ENST00000547904 679 ntBASIC17.5■□□□□ 0.39
RBFOX3A6NFN3 NRG1-221ENST00000614767 762 ntTSL 5 BASIC17.5■□□□□ 0.39
RBFOX3A6NFN3 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RBFOX3A6NFN3 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC17.5■□□□□ 0.39
RBFOX3A6NFN3 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC17.5■□□□□ 0.39
RBFOX3A6NFN3 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC17.5■□□□□ 0.39
RBFOX3A6NFN3 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC17.5■□□□□ 0.39
RBFOX3A6NFN3 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RBFOX3A6NFN3 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
RBFOX3A6NFN3 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
RBFOX3A6NFN3 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC17.49■□□□□ 0.39
RBFOX3A6NFN3 LINC01521-201ENST00000504184 1943 ntBASIC17.49■□□□□ 0.39
RBFOX3A6NFN3 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
RBFOX3A6NFN3 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
RBFOX3A6NFN3 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
RBFOX3A6NFN3 BOD1-206ENST00000480951 814 ntTSL 2 BASIC17.49■□□□□ 0.39
RBFOX3A6NFN3 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC17.49■□□□□ 0.39
RBFOX3A6NFN3 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC17.49■□□□□ 0.39
RBFOX3A6NFN3 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
RBFOX3A6NFN3 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC17.49■□□□□ 0.39
RBFOX3A6NFN3 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
RBFOX3A6NFN3 AC010542.4-201ENST00000563151 1910 ntBASIC17.49■□□□□ 0.39
RBFOX3A6NFN3 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
RBFOX3A6NFN3 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
RBFOX3A6NFN3 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC17.48■□□□□ 0.39
RBFOX3A6NFN3 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
RBFOX3A6NFN3 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
RBFOX3A6NFN3 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
RBFOX3A6NFN3 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC17.48■□□□□ 0.39
RBFOX3A6NFN3 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
RBFOX3A6NFN3 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC17.48■□□□□ 0.39
RBFOX3A6NFN3 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
RBFOX3A6NFN3 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
RBFOX3A6NFN3 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 20.5 ms