Protein–RNA interactions for Protein: A0A140T963

RNF103-CHMP3, RNF103-CHMP3 readthrough (Fragment), humanhuman

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF103-CHMP3A0A140T963 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1
RNF103-CHMP3A0A140T963 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
RNF103-CHMP3A0A140T963 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC21.33■■□□□ 1
RNF103-CHMP3A0A140T963 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
RNF103-CHMP3A0A140T963 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC21.32■■□□□ 1
RNF103-CHMP3A0A140T963 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC21.32■■□□□ 1
RNF103-CHMP3A0A140T963 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC21.32■■□□□ 1
RNF103-CHMP3A0A140T963 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC21.32■■□□□ 1
RNF103-CHMP3A0A140T963 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
RNF103-CHMP3A0A140T963 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC21.32■■□□□ 1
RNF103-CHMP3A0A140T963 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC21.32■■□□□ 1
RNF103-CHMP3A0A140T963 AC007375.3-201ENST00000600936 2314 ntBASIC21.32■■□□□ 1
RNF103-CHMP3A0A140T963 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
RNF103-CHMP3A0A140T963 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC21.31■■□□□ 1
RNF103-CHMP3A0A140T963 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
RNF103-CHMP3A0A140T963 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
RNF103-CHMP3A0A140T963 KRT8P33-201ENST00000508125 1423 ntBASIC21.31■■□□□ 1
RNF103-CHMP3A0A140T963 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC21.31■■□□□ 1
RNF103-CHMP3A0A140T963 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC21.31■■□□□ 1
RNF103-CHMP3A0A140T963 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
RNF103-CHMP3A0A140T963 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC21.31■■□□□ 1
RNF103-CHMP3A0A140T963 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
RNF103-CHMP3A0A140T963 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC21.31■■□□□ 1
RNF103-CHMP3A0A140T963 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC21.31■■□□□ 1
RNF103-CHMP3A0A140T963 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC21.31■■□□□ 1
RNF103-CHMP3A0A140T963 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC21.31■■□□□ 1
RNF103-CHMP3A0A140T963 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC21.31■■□□□ 1
RNF103-CHMP3A0A140T963 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC21.31■■□□□ 1
RNF103-CHMP3A0A140T963 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC21.31■■□□□ 1
RNF103-CHMP3A0A140T963 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC21.31■■□□□ 1
RNF103-CHMP3A0A140T963 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC21.31■■□□□ 1
RNF103-CHMP3A0A140T963 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
RNF103-CHMP3A0A140T963 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
RNF103-CHMP3A0A140T963 AL024507.2-201ENST00000606070 2574 ntBASIC21.31■■□□□ 1
RNF103-CHMP3A0A140T963 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
RNF103-CHMP3A0A140T963 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
RNF103-CHMP3A0A140T963 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC21.3■■□□□ 1
RNF103-CHMP3A0A140T963 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC21.3■■□□□ 1
RNF103-CHMP3A0A140T963 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
RNF103-CHMP3A0A140T963 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
RNF103-CHMP3A0A140T963 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
RNF103-CHMP3A0A140T963 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC21.3■■□□□ 1
RNF103-CHMP3A0A140T963 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC21.3■■□□□ 1
RNF103-CHMP3A0A140T963 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC21.3■■□□□ 1
RNF103-CHMP3A0A140T963 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC21.3■■□□□ 1
RNF103-CHMP3A0A140T963 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC21.29■■□□□ 1
RNF103-CHMP3A0A140T963 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC21.29■■□□□ 1
RNF103-CHMP3A0A140T963 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC21.29■■□□□ 1
RNF103-CHMP3A0A140T963 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC21.29■■□□□ 1
RNF103-CHMP3A0A140T963 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC21.29■■□□□ 1
RNF103-CHMP3A0A140T963 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC21.29■■□□□ 1
RNF103-CHMP3A0A140T963 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
RNF103-CHMP3A0A140T963 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC21.29■■□□□ 1
RNF103-CHMP3A0A140T963 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
RNF103-CHMP3A0A140T963 H19-210ENST00000439725 1929 ntTSL 2 BASIC21.29■■□□□ 1
RNF103-CHMP3A0A140T963 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC21.29■■□□□ 1
RNF103-CHMP3A0A140T963 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC21.29■■□□□ 1
RNF103-CHMP3A0A140T963 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC21.28■■□□□ 1
RNF103-CHMP3A0A140T963 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
RNF103-CHMP3A0A140T963 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
RNF103-CHMP3A0A140T963 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
RNF103-CHMP3A0A140T963 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
RNF103-CHMP3A0A140T963 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
RNF103-CHMP3A0A140T963 AC103834.1-201ENST00000520383 144 ntBASIC21.28■■□□□ 1
RNF103-CHMP3A0A140T963 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC21.28■■□□□ 1
RNF103-CHMP3A0A140T963 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
RNF103-CHMP3A0A140T963 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC21.28■■□□□ 1
RNF103-CHMP3A0A140T963 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC21.28■■□□□ 1
RNF103-CHMP3A0A140T963 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC21.28■■□□□ 1
RNF103-CHMP3A0A140T963 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC21.28■■□□□ 1
RNF103-CHMP3A0A140T963 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC21.28■■□□□ 1
RNF103-CHMP3A0A140T963 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
RNF103-CHMP3A0A140T963 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC21.27■■□□□ 1
RNF103-CHMP3A0A140T963 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC21.27■■□□□ 1
RNF103-CHMP3A0A140T963 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC21.27■■□□□ 1
RNF103-CHMP3A0A140T963 YBX1P4-201ENST00000392794 808 ntBASIC21.27■■□□□ 1
RNF103-CHMP3A0A140T963 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC21.27■■□□□ 1
RNF103-CHMP3A0A140T963 AC004448.1-201ENST00000458332 883 ntBASIC21.27■■□□□ 1
RNF103-CHMP3A0A140T963 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC21.27■■□□□ 1
RNF103-CHMP3A0A140T963 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC21.27■■□□□ 1
RNF103-CHMP3A0A140T963 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC21.27■■□□□ 1
RNF103-CHMP3A0A140T963 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
RNF103-CHMP3A0A140T963 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC21.27■□□□□ 0.99
RNF103-CHMP3A0A140T963 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC21.27■□□□□ 0.99
RNF103-CHMP3A0A140T963 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
RNF103-CHMP3A0A140T963 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
RNF103-CHMP3A0A140T963 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
RNF103-CHMP3A0A140T963 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
RNF103-CHMP3A0A140T963 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
RNF103-CHMP3A0A140T963 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
RNF103-CHMP3A0A140T963 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
RNF103-CHMP3A0A140T963 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC21.26■□□□□ 0.99
RNF103-CHMP3A0A140T963 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
RNF103-CHMP3A0A140T963 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
RNF103-CHMP3A0A140T963 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC21.26■□□□□ 0.99
RNF103-CHMP3A0A140T963 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC21.25■□□□□ 0.99
RNF103-CHMP3A0A140T963 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC21.25■□□□□ 0.99
RNF103-CHMP3A0A140T963 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
RNF103-CHMP3A0A140T963 AC103724.3-201ENST00000564481 992 ntBASIC21.25■□□□□ 0.99
RNF103-CHMP3A0A140T963 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC21.25■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 39.8 ms