Protein–RNA interactions for Protein: A0A075B641

Trav8-1, T cell receptor alpha variable 8-1 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8-1A0A075B641 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Trav8-1A0A075B641 Pkd1-207ENSMUST00000228550 1050 ntBASIC14.2□□□□□ -0.14
Trav8-1A0A075B641 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav8-1A0A075B641 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav8-1A0A075B641 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC14.2□□□□□ -0.14
Trav8-1A0A075B641 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav8-1A0A075B641 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav8-1A0A075B641 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav8-1A0A075B641 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav8-1A0A075B641 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Trav8-1A0A075B641 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav8-1A0A075B641 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Trav8-1A0A075B641 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav8-1A0A075B641 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav8-1A0A075B641 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav8-1A0A075B641 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav8-1A0A075B641 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC14.19□□□□□ -0.14
Trav8-1A0A075B641 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Trav8-1A0A075B641 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav8-1A0A075B641 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav8-1A0A075B641 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC14.19□□□□□ -0.14
Trav8-1A0A075B641 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav8-1A0A075B641 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav8-1A0A075B641 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Trav8-1A0A075B641 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Trav8-1A0A075B641 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Trav8-1A0A075B641 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav8-1A0A075B641 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav8-1A0A075B641 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Trav8-1A0A075B641 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
Trav8-1A0A075B641 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav8-1A0A075B641 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Trav8-1A0A075B641 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav8-1A0A075B641 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC14.18□□□□□ -0.14
Trav8-1A0A075B641 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav8-1A0A075B641 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav8-1A0A075B641 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav8-1A0A075B641 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav8-1A0A075B641 Rarb-207ENSMUST00000225921 2756 ntBASIC14.17□□□□□ -0.14
Trav8-1A0A075B641 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav8-1A0A075B641 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav8-1A0A075B641 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Trav8-1A0A075B641 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav8-1A0A075B641 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Trav8-1A0A075B641 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Trav8-1A0A075B641 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Trav8-1A0A075B641 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav8-1A0A075B641 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Trav8-1A0A075B641 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav8-1A0A075B641 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav8-1A0A075B641 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav8-1A0A075B641 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav8-1A0A075B641 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Trav8-1A0A075B641 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC14.17□□□□□ -0.14
Trav8-1A0A075B641 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav8-1A0A075B641 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav8-1A0A075B641 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Trav8-1A0A075B641 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Trav8-1A0A075B641 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav8-1A0A075B641 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Trav8-1A0A075B641 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav8-1A0A075B641 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav8-1A0A075B641 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav8-1A0A075B641 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav8-1A0A075B641 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav8-1A0A075B641 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav8-1A0A075B641 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC14.16□□□□□ -0.14
Trav8-1A0A075B641 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav8-1A0A075B641 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav8-1A0A075B641 AC122428.2-201ENSMUST00000216321 1832 ntBASIC14.15□□□□□ -0.14
Trav8-1A0A075B641 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Trav8-1A0A075B641 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav8-1A0A075B641 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Trav8-1A0A075B641 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC14.15□□□□□ -0.14
Trav8-1A0A075B641 AC167019.3-201ENSMUST00000228225 1266 ntBASIC14.15□□□□□ -0.14
Trav8-1A0A075B641 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav8-1A0A075B641 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav8-1A0A075B641 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav8-1A0A075B641 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav8-1A0A075B641 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
Trav8-1A0A075B641 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav8-1A0A075B641 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC14.14□□□□□ -0.15
Trav8-1A0A075B641 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav8-1A0A075B641 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav8-1A0A075B641 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav8-1A0A075B641 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Trav8-1A0A075B641 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Trav8-1A0A075B641 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav8-1A0A075B641 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav8-1A0A075B641 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav8-1A0A075B641 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav8-1A0A075B641 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
Trav8-1A0A075B641 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Trav8-1A0A075B641 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav8-1A0A075B641 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Trav8-1A0A075B641 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trav8-1A0A075B641 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trav8-1A0A075B641 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trav8-1A0A075B641 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trav8-1A0A075B641 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 27.1 ms