Protein–RNA interactions for Protein: P46098

HTR3A, 5-hydroxytryptamine receptor 3A, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTR3AP46098 AL583805.1-201ENST00000391389 531 ntBASIC12.65□□□□□ -0.38
HTR3AP46098 VAMP1-203ENST00000400911 1068 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
HTR3AP46098 AL589935.1-203ENST00000412751 465 ntTSL 3 BASIC12.65□□□□□ -0.38
HTR3AP46098 DMAC2-203ENST00000417807 1065 ntTSL 2 BASIC12.65□□□□□ -0.38
HTR3AP46098 MIR4435-2HG-204ENST00000419736 777 ntTSL 3 BASIC12.65□□□□□ -0.38
HTR3AP46098 GS1-124K5.4-201ENST00000445681 540 ntTSL 2 BASIC12.65□□□□□ -0.38
HTR3AP46098 AC011995.2-201ENST00000452701 574 ntTSL 4 BASIC12.65□□□□□ -0.38
HTR3AP46098 AL136088.1-202ENST00000525871 439 ntTSL 2 BASIC12.65□□□□□ -0.38
HTR3AP46098 RTN3P1-201ENST00000536295 711 ntBASIC12.65□□□□□ -0.38
HTR3AP46098 KLF17P1-201ENST00000547105 1126 ntBASIC12.65□□□□□ -0.38
HTR3AP46098 ACTG1P17-201ENST00000558391 1119 ntBASIC12.65□□□□□ -0.38
HTR3AP46098 AC135782.2-201ENST00000562040 472 ntTSL 3 BASIC12.65□□□□□ -0.38
HTR3AP46098 PPCDC-205ENST00000563393 1149 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
HTR3AP46098 PPCDC-208ENST00000567336 892 ntTSL 5 BASIC12.65□□□□□ -0.38
HTR3AP46098 AC104961.2-201ENST00000578129 663 ntTSL 2 BASIC12.65□□□□□ -0.38
HTR3AP46098 MIR3940-201ENST00000579148 102 ntBASIC12.65□□□□□ -0.38
HTR3AP46098 TNNT1-209ENST00000587758 1016 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
HTR3AP46098 SIGLEC22P-201ENST00000599104 714 ntBASIC12.65□□□□□ -0.38
HTR3AP46098 SIGLEC22P-202ENST00000602065 544 ntTSL 4 BASIC12.65□□□□□ -0.38
HTR3AP46098 EAF1-AS1-208ENST00000608408 770 ntTSL 5 BASIC12.65□□□□□ -0.38
HTR3AP46098 SNRPA1-216ENST00000626000 539 ntTSL 5 BASIC12.65□□□□□ -0.38
HTR3AP46098 PLEKHB2-211ENST00000628582 1297 ntTSL 2 BASIC12.65□□□□□ -0.38
HTR3AP46098 AC138627.1-207ENST00000641560 1006 ntBASIC12.65□□□□□ -0.38
HTR3AP46098 ILDR1-201ENST00000273691 2659 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
HTR3AP46098 ARMCX2-202ENST00000330154 2663 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
HTR3AP46098 TMEM182-201ENST00000409173 3198 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
HTR3AP46098 GOLGA8IP-201ENST00000340249 1899 ntTSL 2 BASIC12.65□□□□□ -0.38
HTR3AP46098 BAIAP3-203ENST00000421665 3875 ntTSL 2 BASIC12.65□□□□□ -0.38
HTR3AP46098 PLAT-211ENST00000524009 1613 ntTSL 2 BASIC12.65□□□□□ -0.38
HTR3AP46098 CACNA1A-211ENST00000592864 1623 ntTSL 3 BASIC12.65□□□□□ -0.38
HTR3AP46098 KCNMA1-216ENST00000457953 3976 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
HTR3AP46098 SMIM12-206ENST00000521580 3454 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
HTR3AP46098 PTPN1-202ENST00000541713 3469 ntTSL 2 BASIC12.65□□□□□ -0.38
HTR3AP46098 UAP1L1-201ENST00000360271 3201 ntTSL 2 BASIC12.65□□□□□ -0.38
HTR3AP46098 KDM5C-208ENST00000452825 6096 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
HTR3AP46098 AC010096.1-201ENST00000443897 1709 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
HTR3AP46098 CYB561D1-206ENST00000496961 3424 ntTSL 2 BASIC12.65□□□□□ -0.39
HTR3AP46098 AC239809.3-201ENST00000599640 4266 ntTSL 5 BASIC12.65□□□□□ -0.39
HTR3AP46098 LLGL1-203ENST00000621229 3187 ntTSL 5 BASIC12.65□□□□□ -0.39
HTR3AP46098 INSC-205ENST00000525218 1576 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
HTR3AP46098 NRADDP-202ENST00000641269 1585 ntBASIC12.64□□□□□ -0.39
HTR3AP46098 SLC28A1-203ENST00000394573 2769 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
HTR3AP46098 LINC00638-201ENST00000555578 2518 ntBASIC12.64□□□□□ -0.39
HTR3AP46098 GNB1L-201ENST00000329517 6706 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
HTR3AP46098 SESN2-201ENST00000253063 3453 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
HTR3AP46098 SLC28A1-201ENST00000286749 2636 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
HTR3AP46098 GRIA4-210ENST00000527669 2647 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
HTR3AP46098 MATN2-211ENST00000521689 3554 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
HTR3AP46098 NDRG4-201ENST00000258187 3324 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
HTR3AP46098 AC138761.6-201ENST00000583997 1423 ntBASIC12.64□□□□□ -0.39
HTR3AP46098 CTCFL-218ENST00000608440 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
HTR3AP46098 Z98885.3-201ENST00000624882 1757 ntBASIC12.64□□□□□ -0.39
HTR3AP46098 AC108002.1-201ENST00000520572 5684 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
HTR3AP46098 AC006450.3-201ENST00000453529 2146 ntTSL 2 BASIC12.64□□□□□ -0.39
HTR3AP46098 SLC25A35-203ENST00000579192 2136 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
HTR3AP46098 NCOR2-208ENST00000429285 8475 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
HTR3AP46098 LAMB2-201ENST00000305544 5643 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
HTR3AP46098 PGM3-201ENST00000283977 2219 ntTSL 5 BASIC12.64□□□□□ -0.39
HTR3AP46098 ALPL-206ENST00000539907 2241 ntTSL 2 BASIC12.64□□□□□ -0.39
HTR3AP46098 CLCNKB-202ENST00000375679 2567 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
HTR3AP46098 PHLDB1-201ENST00000356063 5240 ntAPPRIS ALT2 TSL 2 BASIC12.64□□□□□ -0.39
HTR3AP46098 IZUMO1-201ENST00000332955 1621 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
HTR3AP46098 DKK4-201ENST00000220812 894 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
HTR3AP46098 CSHL1-203ENST00000346606 659 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
HTR3AP46098 TOMM7-201ENST00000358435 778 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
HTR3AP46098 FCGR1B-203ENST00000369384 1044 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
HTR3AP46098 MIR557-201ENST00000385239 98 ntBASIC12.64□□□□□ -0.39
HTR3AP46098 BLCAP-204ENST00000397135 685 ntAPPRIS P1 TSL 4 BASIC12.64□□□□□ -0.39
HTR3AP46098 DCAF7-201ENST00000415273 1220 ntTSL 2 BASIC12.64□□□□□ -0.39
HTR3AP46098 AL807761.2-201ENST00000422849 729 ntBASIC12.64□□□□□ -0.39
HTR3AP46098 AL592076.1-201ENST00000424448 303 ntBASIC12.64□□□□□ -0.39
HTR3AP46098 AL591684.1-201ENST00000434533 234 ntTSL 5 BASIC12.64□□□□□ -0.39
HTR3AP46098 LINC01006-204ENST00000435354 545 ntTSL 2 BASIC12.64□□□□□ -0.39
HTR3AP46098 AL136982.2-201ENST00000451760 234 ntTSL 5 BASIC12.64□□□□□ -0.39
HTR3AP46098 AL355376.1-201ENST00000456082 517 ntTSL 3 BASIC12.64□□□□□ -0.39
HTR3AP46098 RN7SL788P-201ENST00000460504 316 ntBASIC12.64□□□□□ -0.39
HTR3AP46098 KLHDC8A-203ENST00000460687 1022 ntTSL 5 BASIC12.64□□□□□ -0.39
HTR3AP46098 HOXB-AS3-209ENST00000477144 743 ntTSL 5 BASIC12.64□□□□□ -0.39
HTR3AP46098 RN7SL67P-201ENST00000492147 296 ntBASIC12.64□□□□□ -0.39
HTR3AP46098 CD81-209ENST00000492627 886 ntTSL 3 BASIC12.64□□□□□ -0.39
HTR3AP46098 NUP210P1-202ENST00000504322 710 ntBASIC12.64□□□□□ -0.39
HTR3AP46098 ENDOV-229ENST00000523999 864 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
HTR3AP46098 MRPL48-210ENST00000542303 661 ntTSL 3 BASIC12.64□□□□□ -0.39
HTR3AP46098 ERVK13-1-204ENST00000566343 567 ntTSL 4 BASIC12.64□□□□□ -0.39
HTR3AP46098 AC005779.2-201ENST00000593083 550 ntAPPRIS P1 TSL 4 BASIC12.64□□□□□ -0.39
HTR3AP46098 EXOSC5-204ENST00000596905 826 ntTSL 2 BASIC12.64□□□□□ -0.39
HTR3AP46098 TLDC2-203ENST00000602922 1179 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
HTR3AP46098 LINC01668-201ENST00000635001 513 ntTSL 4 BASIC12.64□□□□□ -0.39
HTR3AP46098 LINC00865-202ENST00000448963 4272 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
HTR3AP46098 ENDOV-207ENST00000518907 2418 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
HTR3AP46098 APLP2-202ENST00000278756 3687 ntAPPRIS ALT2 TSL 2 BASIC12.64□□□□□ -0.39
HTR3AP46098 POLR1C-203ENST00000372389 1355 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
HTR3AP46098 SYK-203ENST00000375751 4936 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
HTR3AP46098 ANKZF1-202ENST00000409849 2155 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
HTR3AP46098 NOA1-201ENST00000264230 3415 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
HTR3AP46098 POLD1-205ENST00000595904 3402 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
HTR3AP46098 DHX58-201ENST00000251642 2617 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
HTR3AP46098 ZHX1-202ENST00000395571 5108 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
HTR3AP46098 CCDC138-203ENST00000412964 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
HTR3AP46098 GTF2F1-201ENST00000394456 2731 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 43.4 ms