Protein–RNA interactions for Protein: Q5THJ4

VPS13D, Vacuolar protein sorting-associated protein 13D, humanhuman

Predictions only

Length 4,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13DQ5THJ4 CYP2F2P-201ENST00000437853 1056 ntBASIC8.68□□□□□ -1.02
VPS13DQ5THJ4 AC099681.2-201ENST00000449899 543 ntTSL 4 BASIC8.68□□□□□ -1.02
VPS13DQ5THJ4 OVOL1-AS1-203ENST00000534178 493 ntTSL 2 BASIC8.68□□□□□ -1.02
VPS13DQ5THJ4 AC051619.6-201ENST00000558039 595 ntTSL 4 BASIC8.68□□□□□ -1.02
VPS13DQ5THJ4 AC007728.3-201ENST00000602304 746 ntBASIC8.68□□□□□ -1.02
VPS13DQ5THJ4 AL627230.7-201ENST00000613971 601 ntBASIC8.68□□□□□ -1.02
VPS13DQ5THJ4 L3MBTL1-204ENST00000418998 3365 ntAPPRIS ALT2 TSL 2 BASIC8.68□□□□□ -1.02
VPS13DQ5THJ4 TRIM67-201ENST00000366653 3936 ntAPPRIS P2 TSL 1 (best) BASIC8.68□□□□□ -1.02
VPS13DQ5THJ4 AC012485.1-201ENST00000456601 2509 ntTSL 2 BASIC8.67□□□□□ -1.02
VPS13DQ5THJ4 AC041040.2-201ENST00000622926 2899 ntBASIC8.67□□□□□ -1.02
VPS13DQ5THJ4 MEG8-220ENST00000636052 1369 ntTSL 5 BASIC8.67□□□□□ -1.02
VPS13DQ5THJ4 SERPING1-203ENST00000378323 1733 ntAPPRIS ALT2 TSL 2 BASIC8.67□□□□□ -1.02
VPS13DQ5THJ4 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
VPS13DQ5THJ4 RPS6KA4-202ENST00000528057 3121 ntAPPRIS ALT1 TSL 1 (best) BASIC8.67□□□□□ -1.02
VPS13DQ5THJ4 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC8.67□□□□□ -1.02
VPS13DQ5THJ4 NBR2-202ENST00000460115 1344 ntTSL 2 BASIC8.67□□□□□ -1.02
VPS13DQ5THJ4 JPX-207ENST00000602772 1692 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
VPS13DQ5THJ4 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
VPS13DQ5THJ4 METTL3-201ENST00000298717 2015 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
VPS13DQ5THJ4 BNIP3-201ENST00000368636 2861 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
VPS13DQ5THJ4 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
VPS13DQ5THJ4 CRELD1-202ENST00000383811 2696 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
VPS13DQ5THJ4 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
VPS13DQ5THJ4 ATP6V1B1-AS1-201ENST00000422761 1129 ntTSL 2 BASIC8.67□□□□□ -1.02
VPS13DQ5THJ4 VSTM1-205ENST00000425006 608 ntAPPRIS ALT2 TSL 5 BASIC8.67□□□□□ -1.02
VPS13DQ5THJ4 MTND6P14-201ENST00000433044 522 ntBASIC8.67□□□□□ -1.02
VPS13DQ5THJ4 GPER1-203ENST00000397092 2971 ntAPPRIS P1 TSL 2 BASIC8.67□□□□□ -1.02
VPS13DQ5THJ4 GRIA4-210ENST00000527669 2647 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
VPS13DQ5THJ4 FGD5-AS1-202ENST00000424349 3792 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
VPS13DQ5THJ4 NADSYN1-216ENST00000530055 2416 ntTSL 2 BASIC8.67□□□□□ -1.02
VPS13DQ5THJ4 KATNBL1-201ENST00000256544 2723 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
VPS13DQ5THJ4 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC8.67□□□□□ -1.02
VPS13DQ5THJ4 ITGAX-204ENST00000562918 1521 ntTSL 2 BASIC8.67□□□□□ -1.02
VPS13DQ5THJ4 ORC6-204ENST00000566860 1699 ntTSL 2 BASIC8.67□□□□□ -1.02
VPS13DQ5THJ4 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
VPS13DQ5THJ4 IL21R-AS1-201ENST00000563191 2615 ntTSL 2 BASIC8.67□□□□□ -1.02
VPS13DQ5THJ4 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
VPS13DQ5THJ4 CCDC33-206ENST00000558821 1993 ntTSL 2 BASIC8.67□□□□□ -1.02
VPS13DQ5THJ4 AC008806.1-201ENST00000624962 2443 ntBASIC8.67□□□□□ -1.02
VPS13DQ5THJ4 AP000866.2-201ENST00000504932 1493 ntTSL 2 BASIC8.67□□□□□ -1.02
VPS13DQ5THJ4 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
VPS13DQ5THJ4 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
VPS13DQ5THJ4 GPR119-201ENST00000276218 1008 ntAPPRIS P1 BASIC8.67□□□□□ -1.02
VPS13DQ5THJ4 KRTAP19-2-201ENST00000334055 380 ntAPPRIS P1 BASIC8.67□□□□□ -1.02
VPS13DQ5THJ4 AL391647.1-201ENST00000395664 511 ntBASIC8.67□□□□□ -1.02
VPS13DQ5THJ4 MDM1-204ENST00000411698 2472 ntAPPRIS ALT2 TSL 2 BASIC8.67□□□□□ -1.02
VPS13DQ5THJ4 BANF1P4-201ENST00000420029 270 ntBASIC8.67□□□□□ -1.02
VPS13DQ5THJ4 PHBP11-201ENST00000420550 809 ntBASIC8.67□□□□□ -1.02
VPS13DQ5THJ4 AP000281.2-201ENST00000427911 384 ntTSL 3 BASIC8.67□□□□□ -1.02
VPS13DQ5THJ4 CNN2P1-201ENST00000453616 918 ntBASIC8.67□□□□□ -1.02
VPS13DQ5THJ4 IL2RG-204ENST00000456850 540 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
VPS13DQ5THJ4 EEF1GP1-201ENST00000457231 1299 ntBASIC8.67□□□□□ -1.02
VPS13DQ5THJ4 ELOBP2-201ENST00000526184 355 ntBASIC8.67□□□□□ -1.02
VPS13DQ5THJ4 AP001453.2-201ENST00000544553 391 ntTSL 2 BASIC8.67□□□□□ -1.02
VPS13DQ5THJ4 AC133539.1-201ENST00000562644 420 ntTSL 5 BASIC8.67□□□□□ -1.02
VPS13DQ5THJ4 UBA52-213ENST00000599551 707 ntAPPRIS P1 TSL 2 BASIC8.67□□□□□ -1.02
VPS13DQ5THJ4 KIZ-213ENST00000620891 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC8.67□□□□□ -1.02
VPS13DQ5THJ4 RNF182-208ENST00000544682 3495 ntAPPRIS P1 TSL 4 BASIC8.67□□□□□ -1.02
VPS13DQ5THJ4 PABPC1P2-201ENST00000471997 1805 ntBASIC8.67□□□□□ -1.02
VPS13DQ5THJ4 AC026748.1-201ENST00000624349 3251 ntBASIC8.67□□□□□ -1.02
VPS13DQ5THJ4 SNX14-203ENST00000369627 3111 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
VPS13DQ5THJ4 ITGB2-206ENST00000397852 2769 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
VPS13DQ5THJ4 DEDD-203ENST00000458050 2300 ntAPPRIS P1 TSL 2 BASIC8.67□□□□□ -1.02
VPS13DQ5THJ4 LINC01230-201ENST00000625222 3017 ntBASIC8.67□□□□□ -1.02
VPS13DQ5THJ4 AC009474.1-201ENST00000455096 1565 ntBASIC8.67□□□□□ -1.02
VPS13DQ5THJ4 GPR55-205ENST00000622008 2526 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
VPS13DQ5THJ4 OR4C6-201ENST00000314259 1020 ntAPPRIS P1 BASIC8.67□□□□□ -1.02
VPS13DQ5THJ4 MRPL55-213ENST00000366740 644 ntAPPRIS P1 TSL 2 BASIC8.67□□□□□ -1.02
VPS13DQ5THJ4 TIMM23B-201ENST00000374098 1142 ntAPPRIS P1 TSL 2 BASIC8.67□□□□□ -1.02
VPS13DQ5THJ4 THUMPD1P1-201ENST00000400014 1041 ntBASIC8.67□□□□□ -1.02
VPS13DQ5THJ4 LINC00106-201ENST00000430235 370 ntTSL 2 BASIC8.67□□□□□ -1.02
VPS13DQ5THJ4 AC022447.2-201ENST00000509750 543 ntTSL 3 BASIC8.67□□□□□ -1.02
VPS13DQ5THJ4 AC024475.1-201ENST00000528480 605 ntTSL 5 BASIC8.67□□□□□ -1.02
VPS13DQ5THJ4 TRIAP1-202ENST00000546954 1182 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
VPS13DQ5THJ4 FXYD3-212ENST00000605550 590 ntTSL 4 BASIC8.67□□□□□ -1.02
VPS13DQ5THJ4 AL160287.1-203ENST00000637960 1061 ntBASIC8.67□□□□□ -1.02
VPS13DQ5THJ4 ATXN10-212ENST00000640901 1185 ntTSL 5 BASIC8.67□□□□□ -1.02
VPS13DQ5THJ4 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC8.67□□□□□ -1.02
VPS13DQ5THJ4 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC8.67□□□□□ -1.02
VPS13DQ5THJ4 ATG13-215ENST00000529655 2566 ntAPPRIS P1 TSL 2 BASIC8.67□□□□□ -1.02
VPS13DQ5THJ4 PDE1B-207ENST00000550620 2150 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
VPS13DQ5THJ4 PRL-203ENST00000617911 1364 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
VPS13DQ5THJ4 LINC00642-201ENST00000419459 2026 ntTSL 2 BASIC8.67□□□□□ -1.02
VPS13DQ5THJ4 METTL12-203ENST00000532971 2037 ntAPPRIS P1 TSL 2 BASIC8.67□□□□□ -1.02
VPS13DQ5THJ4 CDK2-201ENST00000266970 2296 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
VPS13DQ5THJ4 HTR7-202ENST00000336152 3126 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
VPS13DQ5THJ4 CAMK2D-204ENST00000394522 2696 ntAPPRIS ALT1 TSL 1 (best) BASIC8.66□□□□□ -1.02
VPS13DQ5THJ4 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
VPS13DQ5THJ4 GUCY1A3-213ENST00000621234 1788 ntTSL 5 BASIC8.66□□□□□ -1.02
VPS13DQ5THJ4 NDRG2-251ENST00000556147 2880 ntAPPRIS P4 TSL 5 BASIC8.66□□□□□ -1.02
VPS13DQ5THJ4 SERTAD3-202ENST00000392028 1515 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
VPS13DQ5THJ4 ZNF44-202ENST00000355684 2119 ntAPPRIS P3 TSL 2 BASIC8.66□□□□□ -1.02
VPS13DQ5THJ4 VSTM1-202ENST00000366170 654 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
VPS13DQ5THJ4 IGLV3-21-201ENST00000390308 602 ntAPPRIS P1 BASIC8.66□□□□□ -1.02
VPS13DQ5THJ4 AC010442.2-201ENST00000509301 407 ntBASIC8.66□□□□□ -1.02
VPS13DQ5THJ4 AC007608.2-201ENST00000569940 1146 ntTSL 3 BASIC8.66□□□□□ -1.02
VPS13DQ5THJ4 PTMAP5-202ENST00000607242 1162 ntBASIC8.66□□□□□ -1.02
VPS13DQ5THJ4 MED25-209ENST00000612791 881 ntTSL 5 BASIC8.66□□□□□ -1.02
VPS13DQ5THJ4 RGPD6-202ENST00000330331 2848 ntTSL 2 BASIC8.66□□□□□ -1.02
VPS13DQ5THJ4 RGPD8-202ENST00000330575 2848 ntTSL 2 BASIC8.66□□□□□ -1.02
Retrieved 100 of 98,524 protein–RNA pairs in 61 ms