Protein–RNA interactions for Protein: Q0VF96

CGNL1, Cingulin-like protein 1, humanhuman

Predictions only

Length 1,302 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CGNL1Q0VF96 MSH2-206ENST00000543555 3024 ntTSL 2 BASIC18.32■□□□□ 0.52
CGNL1Q0VF96 MEGF11-204ENST00000422354 5914 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CGNL1Q0VF96 MYH11-201ENST00000300036 6029 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
CGNL1Q0VF96 PPP1R26P4-201ENST00000619065 3527 ntBASIC18.31■□□□□ 0.52
CGNL1Q0VF96 PCMTD2-204ENST00000369758 3212 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CGNL1Q0VF96 Z97653.2-201ENST00000623057 1418 ntBASIC18.31■□□□□ 0.52
CGNL1Q0VF96 FAM219B-201ENST00000357635 3550 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CGNL1Q0VF96 ZNF614-202ENST00000356322 1293 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CGNL1Q0VF96 TNNT2-207ENST00000367322 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
CGNL1Q0VF96 SPATA21-202ENST00000375577 1136 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CGNL1Q0VF96 UBIAD1-201ENST00000376804 825 ntTSL 2 BASIC18.31■□□□□ 0.52
CGNL1Q0VF96 HNRNPA1P58-201ENST00000403629 610 ntBASIC18.31■□□□□ 0.52
CGNL1Q0VF96 AL158207.2-201ENST00000414926 266 ntTSL 5 BASIC18.31■□□□□ 0.52
CGNL1Q0VF96 HNRNPA1P21-201ENST00000424115 961 ntBASIC18.31■□□□□ 0.52
CGNL1Q0VF96 AC133141.1-201ENST00000443015 339 ntBASIC18.31■□□□□ 0.52
CGNL1Q0VF96 AL136084.1-201ENST00000449172 318 ntBASIC18.31■□□□□ 0.52
CGNL1Q0VF96 AC022201.1-201ENST00000452525 577 ntTSL 4 BASIC18.31■□□□□ 0.52
CGNL1Q0VF96 SNORA47-201ENST00000458862 138 ntBASIC18.31■□□□□ 0.52
CGNL1Q0VF96 RHOH-206ENST00000505618 1225 ntAPPRIS P1 TSL 4 BASIC18.31■□□□□ 0.52
CGNL1Q0VF96 BCRP4-201ENST00000506079 804 ntBASIC18.31■□□□□ 0.52
CGNL1Q0VF96 RNA5SP420-201ENST00000516997 137 ntBASIC18.31■□□□□ 0.52
CGNL1Q0VF96 MIR5091-201ENST00000578707 93 ntBASIC18.31■□□□□ 0.52
CGNL1Q0VF96 AC002985.1-201ENST00000596918 685 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
CGNL1Q0VF96 AC017033.1-201ENST00000603720 708 ntTSL 2 BASIC18.31■□□□□ 0.52
CGNL1Q0VF96 AL807740.1-201ENST00000636971 567 ntTSL 4 BASIC18.31■□□□□ 0.52
CGNL1Q0VF96 RUNX1T1-246ENST00000523629 7537 ntAPPRIS P3 TSL 5 BASIC18.31■□□□□ 0.52
CGNL1Q0VF96 LINC00846-201ENST00000334165 1778 ntTSL 2 BASIC18.31■□□□□ 0.52
CGNL1Q0VF96 ELMOD3-201ENST00000315658 2685 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CGNL1Q0VF96 TPM3P9-201ENST00000424846 2920 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CGNL1Q0VF96 ANKDD1A-207ENST00000496660 1477 ntTSL 2 BASIC18.31■□□□□ 0.52
CGNL1Q0VF96 SERPING1-202ENST00000340687 1719 ntTSL 5 BASIC18.31■□□□□ 0.52
CGNL1Q0VF96 IFNAR2-202ENST00000342136 2899 ntAPPRIS P4 TSL 1 (best) BASIC18.31■□□□□ 0.52
CGNL1Q0VF96 CTRL-205ENST00000574481 1721 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CGNL1Q0VF96 DLGAP1-AS1-201ENST00000317114 1966 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CGNL1Q0VF96 CCDC175-201ENST00000281581 2487 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
CGNL1Q0VF96 TBC1D24-207ENST00000627285 4382 ntAPPRIS P3 TSL 5 BASIC18.31■□□□□ 0.52
CGNL1Q0VF96 OR8J1-202ENST00000533152 1320 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
CGNL1Q0VF96 DAO-208ENST00000551281 1345 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CGNL1Q0VF96 MEF2D-201ENST00000348159 5965 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
CGNL1Q0VF96 SIMC1-205ENST00000443967 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
CGNL1Q0VF96 RCN2-203ENST00000394885 6347 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CGNL1Q0VF96 EDC3-201ENST00000315127 3763 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CGNL1Q0VF96 MGC16275-201ENST00000499670 2501 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CGNL1Q0VF96 ADCY7-208ENST00000566433 2535 ntTSL 5 BASIC18.3■□□□□ 0.52
CGNL1Q0VF96 EXT1-201ENST00000378204 8270 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CGNL1Q0VF96 HAO1-201ENST00000378789 1777 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CGNL1Q0VF96 CPT1A-202ENST00000376618 2635 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CGNL1Q0VF96 SLC25A5-201ENST00000317881 1274 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CGNL1Q0VF96 CMC4-201ENST00000369479 864 ntAPPRIS P1 TSL 3 BASIC18.3■□□□□ 0.52
CGNL1Q0VF96 TMEM95-202ENST00000389982 1191 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CGNL1Q0VF96 PGAM1P11-201ENST00000416729 680 ntBASIC18.3■□□□□ 0.52
CGNL1Q0VF96 IFNWP2-201ENST00000431203 580 ntBASIC18.3■□□□□ 0.52
CGNL1Q0VF96 RAB34-211ENST00000450529 1184 ntTSL 2 BASIC18.3■□□□□ 0.52
CGNL1Q0VF96 CITED1-209ENST00000453707 998 ntAPPRIS ALT2 TSL 3 BASIC18.3■□□□□ 0.52
CGNL1Q0VF96 AC113133.1-201ENST00000522388 1088 ntTSL 2 BASIC18.3■□□□□ 0.52
CGNL1Q0VF96 OR4A49P-201ENST00000527050 632 ntBASIC18.3■□□□□ 0.52
CGNL1Q0VF96 SP6-202ENST00000536300 3848 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
CGNL1Q0VF96 AC005845.1-201ENST00000539206 653 ntTSL 3 BASIC18.3■□□□□ 0.52
CGNL1Q0VF96 PHBP18-201ENST00000546648 813 ntBASIC18.3■□□□□ 0.52
CGNL1Q0VF96 AC027139.1-201ENST00000565286 951 ntBASIC18.3■□□□□ 0.52
CGNL1Q0VF96 MYMX-201ENST00000573382 817 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
CGNL1Q0VF96 AC079336.3-201ENST00000577227 475 ntTSL 3 BASIC18.3■□□□□ 0.52
CGNL1Q0VF96 KRT8P34-201ENST00000577607 1044 ntBASIC18.3■□□□□ 0.52
CGNL1Q0VF96 AL627230.2-201ENST00000613254 655 ntBASIC18.3■□□□□ 0.52
CGNL1Q0VF96 AC010531.8-201ENST00000623341 685 ntBASIC18.3■□□□□ 0.52
CGNL1Q0VF96 TCAF1P1-201ENST00000414990 2232 ntBASIC18.3■□□□□ 0.52
CGNL1Q0VF96 INMT-201ENST00000013222 2559 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
CGNL1Q0VF96 TPCN1-214ENST00000550785 5345 ntTSL 2 BASIC18.3■□□□□ 0.52
CGNL1Q0VF96 CAMKV-215ENST00000488336 2905 ntTSL 2 BASIC18.3■□□□□ 0.52
CGNL1Q0VF96 CILP2-202ENST00000586018 4234 ntAPPRIS ALT1 TSL 2 BASIC18.3■□□□□ 0.52
CGNL1Q0VF96 ZNF485-202ENST00000374435 2052 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CGNL1Q0VF96 NOBOX-201ENST00000467773 2076 ntTSL 5 BASIC18.3■□□□□ 0.52
CGNL1Q0VF96 IL19-201ENST00000270218 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CGNL1Q0VF96 DDX50-201ENST00000373585 2538 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CGNL1Q0VF96 BAIAP3-216ENST00000628027 4732 ntTSL 5 BASIC18.3■□□□□ 0.52
CGNL1Q0VF96 AFF4-201ENST00000265343 9552 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CGNL1Q0VF96 UNC13B-201ENST00000378495 6303 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
CGNL1Q0VF96 ERP29-202ENST00000455836 1333 ntTSL 2 BASIC18.3■□□□□ 0.52
CGNL1Q0VF96 CPA5-203ENST00000461828 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CGNL1Q0VF96 SLC19A1-201ENST00000311124 3811 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
CGNL1Q0VF96 CDIP1-201ENST00000399599 3009 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CGNL1Q0VF96 AC011477.7-201ENST00000617163 1440 ntBASIC18.3■□□□□ 0.52
CGNL1Q0VF96 AL139193.2-201ENST00000553712 1954 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CGNL1Q0VF96 AC010247.2-201ENST00000559786 1955 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CGNL1Q0VF96 CSF2RB-202ENST00000403662 4863 ntAPPRIS P2 TSL 5 BASIC18.29■□□□□ 0.52
CGNL1Q0VF96 GZMB-201ENST00000216341 968 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CGNL1Q0VF96 HNRNPA1P33-201ENST00000421426 561 ntBASIC18.29■□□□□ 0.52
CGNL1Q0VF96 BX248123.1-201ENST00000429070 606 ntTSL 3 BASIC18.29■□□□□ 0.52
CGNL1Q0VF96 AC092896.1-201ENST00000465850 380 ntBASIC18.29■□□□□ 0.52
CGNL1Q0VF96 ARHGEF26-AS1-203ENST00000480639 582 ntTSL 2 BASIC18.29■□□□□ 0.52
CGNL1Q0VF96 AC025171.3-201ENST00000509036 472 ntTSL 2 BASIC18.29■□□□□ 0.52
CGNL1Q0VF96 TOB1-AS1-202ENST00000514358 690 ntTSL 5 BASIC18.29■□□□□ 0.52
CGNL1Q0VF96 AC007193.3-201ENST00000598616 188 ntTSL 3 BASIC18.29■□□□□ 0.52
CGNL1Q0VF96 AL591926.3-201ENST00000611630 238 ntBASIC18.29■□□□□ 0.52
CGNL1Q0VF96 GGNBP1-204ENST00000613113 887 ntBASIC18.29■□□□□ 0.52
CGNL1Q0VF96 SMYD5-209ENST00000629411 246 ntTSL 5 BASIC18.29■□□□□ 0.52
CGNL1Q0VF96 IDH3A-224ENST00000629769 114 ntTSL 5 BASIC18.29■□□□□ 0.52
CGNL1Q0VF96 AC106774.7-201ENST00000638408 597 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
CGNL1Q0VF96 AC106774.6-201ENST00000638483 597 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
CGNL1Q0VF96 AC233724.20-201ENST00000638842 597 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 61.4 ms