Protein–RNA interactions for Protein: P12004

PCNA, Proliferating cell nuclear antigen, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCNAP12004 SRPRB-201ENST00000466490 2827 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
PCNAP12004 TRAK1-210ENST00000613405 4672 ntTSL 2 BASIC13.38□□□□□ -0.27
PCNAP12004 CAPN14-202ENST00000403897 2197 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
PCNAP12004 ATG5-202ENST00000360666 2712 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
PCNAP12004 TBX3-202ENST00000349155 4723 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
PCNAP12004 ENOX1-201ENST00000261488 2982 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
PCNAP12004 TROVE2-208ENST00000432079 7848 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
PCNAP12004 CYP2J2-201ENST00000371204 1896 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
PCNAP12004 YWHAZ-206ENST00000395957 5248 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
PCNAP12004 MRVI1-201ENST00000423302 6126 ntAPPRIS ALT2 TSL 2 BASIC13.37□□□□□ -0.27
PCNAP12004 LINC01114-202ENST00000424321 2112 ntTSL 2 BASIC13.37□□□□□ -0.27
PCNAP12004 PLD1-201ENST00000331659 2906 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
PCNAP12004 AC027369.3-201ENST00000530465 3707 ntBASIC13.37□□□□□ -0.27
PCNAP12004 STAT4-202ENST00000392320 2822 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
PCNAP12004 TASP1-201ENST00000337743 2352 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
PCNAP12004 CHD5-201ENST00000262450 9646 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
PCNAP12004 AF013593.1-201ENST00000458074 1487 ntBASIC13.37□□□□□ -0.27
PCNAP12004 HLCS-201ENST00000336648 6010 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
PCNAP12004 AC026271.4-201ENST00000578214 1833 ntBASIC13.37□□□□□ -0.27
PCNAP12004 HTR4-203ENST00000377888 2962 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
PCNAP12004 GFAP-214ENST00000588735 6538 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
PCNAP12004 ZNF333-209ENST00000601134 1392 ntTSL 5 BASIC13.37□□□□□ -0.27
PCNAP12004 TUBGCP5-208ENST00000620435 3342 ntTSL 2 BASIC13.37□□□□□ -0.27
PCNAP12004 SLC4A5-205ENST00000394019 6348 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
PCNAP12004 TMEM100-201ENST00000424486 1747 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
PCNAP12004 ACIN1-202ENST00000338631 2445 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
PCNAP12004 RGL4-202ENST00000401461 2420 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
PCNAP12004 GTSF1-201ENST00000305879 804 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
PCNAP12004 PLAC8L1-201ENST00000311450 638 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
PCNAP12004 NUP210P1-201ENST00000357061 876 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
PCNAP12004 RGS10-202ENST00000369103 804 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
PCNAP12004 FAM177A1-202ENST00000382406 858 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
PCNAP12004 AL589935.1-203ENST00000412751 465 ntTSL 3 BASIC13.37□□□□□ -0.27
PCNAP12004 AL606491.1-201ENST00000412797 483 ntTSL 3 BASIC13.37□□□□□ -0.27
PCNAP12004 AL121901.1-201ENST00000419613 366 ntTSL 3 BASIC13.37□□□□□ -0.27
PCNAP12004 MIR4435-2HG-204ENST00000419736 777 ntTSL 3 BASIC13.37□□□□□ -0.27
PCNAP12004 AC016730.1-201ENST00000420828 832 ntTSL 2 BASIC13.37□□□□□ -0.27
PCNAP12004 MSRA-203ENST00000441698 788 ntTSL 2 BASIC13.37□□□□□ -0.27
PCNAP12004 H2AFV-207ENST00000446531 1041 ntTSL 2 BASIC13.37□□□□□ -0.27
PCNAP12004 LINC00322-201ENST00000450205 699 ntTSL 3 BASIC13.37□□□□□ -0.27
PCNAP12004 AC011995.2-201ENST00000452701 574 ntTSL 4 BASIC13.37□□□□□ -0.27
PCNAP12004 CD81-209ENST00000492627 886 ntTSL 3 BASIC13.37□□□□□ -0.27
PCNAP12004 ENDOV-229ENST00000523999 864 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
PCNAP12004 ADM-202ENST00000524948 584 ntTSL 2 BASIC13.37□□□□□ -0.27
PCNAP12004 AC145285.5-201ENST00000562217 361 ntBASIC13.37□□□□□ -0.27
PCNAP12004 STUB1-204ENST00000564370 875 ntTSL 2 BASIC13.37□□□□□ -0.27
PCNAP12004 FAM192A-212ENST00000566077 1066 ntTSL 3 BASIC13.37□□□□□ -0.27
PCNAP12004 TMEM205-210ENST00000588560 840 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
PCNAP12004 AC020922.3-201ENST00000595064 547 ntBASIC13.37□□□□□ -0.27
PCNAP12004 SLC26A6-202ENST00000337000 2317 ntTSL 2 BASIC13.37□□□□□ -0.27
PCNAP12004 PGM1-202ENST00000371084 2472 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
PCNAP12004 CREBL2-201ENST00000228865 3754 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
PCNAP12004 MEAF6-204ENST00000373075 2147 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
PCNAP12004 NLRP2-202ENST00000339757 3422 ntAPPRIS ALT2 TSL 2 BASIC13.37□□□□□ -0.27
PCNAP12004 POLD1-205ENST00000595904 3402 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
PCNAP12004 MALL-201ENST00000272462 3061 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
PCNAP12004 SAP30BP-225ENST00000584667 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
PCNAP12004 CTSS-202ENST00000448301 1421 ntTSL 2 BASIC13.37□□□□□ -0.27
PCNAP12004 KRT8P31-201ENST00000504812 1408 ntBASIC13.37□□□□□ -0.27
PCNAP12004 AC138761.6-201ENST00000583997 1423 ntBASIC13.37□□□□□ -0.27
PCNAP12004 ARMC8-213ENST00000470821 1656 ntTSL 5 BASIC13.37□□□□□ -0.27
PCNAP12004 AC040160.2-201ENST00000623816 1675 ntBASIC13.37□□□□□ -0.27
PCNAP12004 CDK2-201ENST00000266970 2296 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
PCNAP12004 DCAF5-209ENST00000557386 2883 ntAPPRIS ALT1 TSL 1 (best) BASIC13.37□□□□□ -0.27
PCNAP12004 PARP10-203ENST00000524918 3469 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
PCNAP12004 REV3L-207ENST00000435970 10943 ntTSL 2 BASIC13.37□□□□□ -0.27
PCNAP12004 VPS54-203ENST00000409558 4337 ntAPPRIS ALT1 TSL 1 (best) BASIC13.37□□□□□ -0.27
PCNAP12004 RHPN1-AS1-201ENST00000518049 1918 ntBASIC13.37□□□□□ -0.27
PCNAP12004 HILPDA-201ENST00000257696 1349 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
PCNAP12004 TEKT4P2-202ENST00000559466 1312 ntBASIC13.37□□□□□ -0.27
PCNAP12004 TMEM78-201ENST00000323223 2175 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
PCNAP12004 TNFSF13-203ENST00000380535 2195 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
PCNAP12004 KCNT1-213ENST00000630792 3606 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
PCNAP12004 CSF3-204ENST00000394149 1583 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
PCNAP12004 RNF123-203ENST00000433785 1555 ntTSL 5 BASIC13.37□□□□□ -0.27
PCNAP12004 NRADDP-202ENST00000641269 1585 ntBASIC13.37□□□□□ -0.27
PCNAP12004 CEP112-202ENST00000392769 3517 ntAPPRIS P4 TSL 5 BASIC13.36□□□□□ -0.27
PCNAP12004 WASHC1-201ENST00000442898 1827 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
PCNAP12004 RBM44-201ENST00000316997 4282 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
PCNAP12004 AC036108.2-201ENST00000566974 2562 ntTSL 2 BASIC13.36□□□□□ -0.27
PCNAP12004 CYB5RL-201ENST00000287899 5777 ntTSL 3 BASIC13.36□□□□□ -0.27
PCNAP12004 MSNP1-201ENST00000511640 1732 ntBASIC13.36□□□□□ -0.27
PCNAP12004 ABLIM2-215ENST00000545242 1972 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
PCNAP12004 GTPBP4-202ENST00000360803 5075 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
PCNAP12004 TXNDC12-201ENST00000371626 2396 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
PCNAP12004 NCF4-202ENST00000397147 1641 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
PCNAP12004 MARK2-205ENST00000408948 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
PCNAP12004 ELN-211ENST00000414324 3139 ntAPPRIS ALT2 TSL 2 BASIC13.36□□□□□ -0.27
PCNAP12004 ZNF815P-201ENST00000421890 1352 ntTSL 2 BASIC13.36□□□□□ -0.27
PCNAP12004 GFRA2-202ENST00000517328 2104 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
PCNAP12004 SPTBN2-209ENST00000533211 8128 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
PCNAP12004 RDH12-203ENST00000551171 1879 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
PCNAP12004 COL1A2-213ENST00000620463 4523 ntTSL 5 BASIC13.36□□□□□ -0.27
PCNAP12004 LINC01679-201ENST00000442815 2798 ntTSL 3 BASIC13.36□□□□□ -0.27
PCNAP12004 GGA1-201ENST00000325180 2528 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
PCNAP12004 CD300LB-202ENST00000392621 2286 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
PCNAP12004 TRIT1-202ENST00000372818 2034 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
PCNAP12004 HPSE2-206ENST00000628193 1760 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
PCNAP12004 RABEPK-206ENST00000628863 1537 ntTSL 5 BASIC13.36□□□□□ -0.27
PCNAP12004 MAPK10-262ENST00000641051 5738 ntBASIC13.36□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 47.7 ms