Protein–RNA interactions for Protein: P02654

APOC1, Apolipoprotein C-I, humanhuman

Predictions only

Length 83 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1P02654 GZF1-202ENST00000377051 4740 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
APOC1P02654 MYRF-201ENST00000265460 5745 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
APOC1P02654 OSBPL2-201ENST00000313733 4009 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
APOC1P02654 DLGAP1-202ENST00000400145 2188 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
APOC1P02654 SNCA-204ENST00000394989 3167 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
APOC1P02654 MCRIP1-212ENST00000576730 2979 ntAPPRIS P1 TSL 2 BASIC12.16□□□□□ -0.46
APOC1P02654 RGS6-203ENST00000402788 5400 ntTSL 2 BASIC12.16□□□□□ -0.46
APOC1P02654 NFATC1-203ENST00000329101 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
APOC1P02654 SLC25A25-203ENST00000373068 3431 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
APOC1P02654 MRM2-201ENST00000242257 1601 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
APOC1P02654 AL353608.3-202ENST00000429953 4384 ntTSL 5 BASIC12.16□□□□□ -0.46
APOC1P02654 TRMT2B-203ENST00000372939 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
APOC1P02654 AOC3-201ENST00000308423 4026 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
APOC1P02654 VWA5B1-201ENST00000289815 4475 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
APOC1P02654 NOBOX-201ENST00000467773 2076 ntTSL 5 BASIC12.16□□□□□ -0.46
APOC1P02654 OR1J1-201ENST00000259357 969 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
APOC1P02654 TEX12-201ENST00000280358 1147 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
APOC1P02654 CSH1-201ENST00000316193 900 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
APOC1P02654 COX14-201ENST00000317943 708 ntAPPRIS P1 TSL 2 BASIC12.16□□□□□ -0.46
APOC1P02654 KRT17P5-201ENST00000332088 839 ntBASIC12.16□□□□□ -0.46
APOC1P02654 MBP-201ENST00000354542 575 ntTSL 2 BASIC12.16□□□□□ -0.46
APOC1P02654 UQCRQ-203ENST00000378670 839 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
APOC1P02654 GK-202ENST00000378941 458 ntTSL 3 BASIC12.16□□□□□ -0.46
APOC1P02654 IGHV1-3-201ENST00000390595 395 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
APOC1P02654 DMAC2-203ENST00000417807 1065 ntTSL 2 BASIC12.16□□□□□ -0.46
APOC1P02654 ZNF815P-202ENST00000422825 805 ntTSL 5 BASIC12.16□□□□□ -0.46
APOC1P02654 PSMB8-AS1-204ENST00000429600 996 ntTSL 2 BASIC12.16□□□□□ -0.46
APOC1P02654 NKAIN1P1-201ENST00000435754 582 ntBASIC12.16□□□□□ -0.46
APOC1P02654 PABPC5-AS1-201ENST00000456187 426 ntTSL 5 BASIC12.16□□□□□ -0.46
APOC1P02654 PGAP2-214ENST00000465307 1100 ntTSL 2 BASIC12.16□□□□□ -0.46
APOC1P02654 SELENOW-201ENST00000509570 881 ntTSL 5 BASIC12.16□□□□□ -0.46
APOC1P02654 LINC02380-201ENST00000510956 1038 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
APOC1P02654 ATG10-207ENST00000513443 978 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
APOC1P02654 CPLX2-209ENST00000515094 576 ntAPPRIS P1 TSL 4 BASIC12.16□□□□□ -0.46
APOC1P02654 ALG1L13P-202ENST00000519320 584 ntBASIC12.16□□□□□ -0.46
APOC1P02654 LINC02369-202ENST00000540745 801 ntTSL 5 BASIC12.16□□□□□ -0.46
APOC1P02654 TCL1A-205ENST00000555202 717 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
APOC1P02654 AC040162.4-201ENST00000574912 1185 ntAPPRIS P1 TSL 3 BASIC12.16□□□□□ -0.46
APOC1P02654 MIR3940-201ENST00000579148 102 ntBASIC12.16□□□□□ -0.46
APOC1P02654 AC008133.1-201ENST00000584688 557 ntTSL 4 BASIC12.16□□□□□ -0.46
APOC1P02654 SELENOW-204ENST00000595615 535 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
APOC1P02654 AL451050.2-201ENST00000606967 682 ntBASIC12.16□□□□□ -0.46
APOC1P02654 AL021707.6-201ENST00000609212 491 ntBASIC12.16□□□□□ -0.46
APOC1P02654 SELENOW-216ENST00000612212 875 ntTSL 5 BASIC12.16□□□□□ -0.46
APOC1P02654 MEF2C-227ENST00000626391 1182 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
APOC1P02654 MEF2C-231ENST00000628656 1254 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
APOC1P02654 AC107375.1-201ENST00000564464 2231 ntBASIC12.16□□□□□ -0.46
APOC1P02654 TMBIM1-201ENST00000258412 2371 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
APOC1P02654 FCRL1-207ENST00000491942 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
APOC1P02654 NR4A1-201ENST00000243050 2678 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
APOC1P02654 AC012531.1-201ENST00000562848 2680 ntBASIC12.16□□□□□ -0.46
APOC1P02654 WARS2-201ENST00000235521 2800 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
APOC1P02654 FIBCD1-204ENST00000448616 3119 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
APOC1P02654 HADHB-209ENST00000545822 1870 ntTSL 5 BASIC12.16□□□□□ -0.46
APOC1P02654 CCNC-210ENST00000520429 2473 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
APOC1P02654 CHD4-211ENST00000544484 6554 ntTSL 2 BASIC12.16□□□□□ -0.46
APOC1P02654 EHD1-201ENST00000320631 4551 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
APOC1P02654 DAB1-207ENST00000420954 1817 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
APOC1P02654 AC002350.2-201ENST00000623894 1828 ntBASIC12.16□□□□□ -0.46
APOC1P02654 TLN2-202ENST00000472902 2116 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
APOC1P02654 TFEB-205ENST00000394283 2595 ntTSL 2 BASIC12.16□□□□□ -0.46
APOC1P02654 PLAT-203ENST00000429089 2599 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
APOC1P02654 PAX8-204ENST00000397647 3633 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
APOC1P02654 ZNF75D-202ENST00000370766 5592 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
APOC1P02654 INTS5-201ENST00000330574 3285 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
APOC1P02654 PDE8B-205ENST00000346042 3276 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
APOC1P02654 COL6A1-207ENST00000612273 3251 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
APOC1P02654 DGKZ-216ENST00000528615 2692 ntTSL 5 BASIC12.15□□□□□ -0.46
APOC1P02654 CALB1-201ENST00000265431 2533 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
APOC1P02654 UGGT2-201ENST00000376712 2240 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
APOC1P02654 SERPINI1-201ENST00000295777 1907 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
APOC1P02654 KRT33B-201ENST00000251646 1607 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
APOC1P02654 COX4I1-208ENST00000564903 1481 ntTSL 2 BASIC12.15□□□□□ -0.46
APOC1P02654 MKNK1-201ENST00000341183 2612 ntTSL 5 BASIC12.15□□□□□ -0.46
APOC1P02654 GCOM1-214ENST00000587652 2329 ntAPPRIS ALT2 TSL 2 BASIC12.15□□□□□ -0.46
APOC1P02654 STXBP1-201ENST00000373299 3765 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
APOC1P02654 BCL2L13-202ENST00000337612 4905 ntTSL 2 BASIC12.15□□□□□ -0.46
APOC1P02654 RAD1-203ENST00000382038 5770 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
APOC1P02654 CDK20-209ENST00000605159 1860 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
APOC1P02654 PPP3R1-201ENST00000234310 3023 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
APOC1P02654 ING4-201ENST00000341550 1709 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
APOC1P02654 AC000120.1-201ENST00000414227 1589 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
APOC1P02654 ZNF341-202ENST00000375200 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
APOC1P02654 TMEM25-201ENST00000313236 2409 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
APOC1P02654 CA14-201ENST00000369111 2403 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
APOC1P02654 SLC20A2-207ENST00000520179 2284 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
APOC1P02654 ATP6V0B-201ENST00000236067 944 ntTSL 2 BASIC12.15□□□□□ -0.46
APOC1P02654 SH3BGRL3-202ENST00000319041 768 ntTSL 2 BASIC12.15□□□□□ -0.46
APOC1P02654 INO80C-202ENST00000334598 974 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
APOC1P02654 CRYBA4-201ENST00000354760 811 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
APOC1P02654 CRCP-204ENST00000398684 492 ntTSL 2 BASIC12.15□□□□□ -0.46
APOC1P02654 ZFAND2B-203ENST00000409206 1159 ntTSL 2 BASIC12.15□□□□□ -0.46
APOC1P02654 SLC16A6P1-201ENST00000413214 1059 ntBASIC12.15□□□□□ -0.46
APOC1P02654 RPS2P32-201ENST00000439199 892 ntBASIC12.15□□□□□ -0.46
APOC1P02654 AC061961.1-201ENST00000443901 432 ntTSL 3 BASIC12.15□□□□□ -0.46
APOC1P02654 AC091804.1-201ENST00000486888 567 ntBASIC12.15□□□□□ -0.46
APOC1P02654 ATP6V0B-211ENST00000498664 825 ntTSL 2 BASIC12.15□□□□□ -0.46
APOC1P02654 AL135838.1-202ENST00000556411 441 ntTSL 2 BASIC12.15□□□□□ -0.46
APOC1P02654 AC000032.1-201ENST00000562538 491 ntTSL 2 BASIC12.15□□□□□ -0.46
APOC1P02654 SNHG25-202ENST00000582965 278 ntTSL 2 BASIC12.15□□□□□ -0.46
Retrieved 100 of 98,524 protein–RNA pairs in 67.4 ms