Protein–RNA interactions for Protein: Q5TC82

RC3H1, Roquin-1, humanhuman

Known RBP Predictions only

Length 1,133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1Q5TC82 ARHGEF28-202ENST00000296799 4424 ntAPPRIS ALT2 TSL 2 BASIC16.73■□□□□ 0.27
RC3H1Q5TC82 UBTF-209ENST00000529383 2570 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
RC3H1Q5TC82 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
RC3H1Q5TC82 SNAP29-201ENST00000215730 4287 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
RC3H1Q5TC82 ERN2-202ENST00000457008 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
RC3H1Q5TC82 AC073869.1-201ENST00000415574 2762 ntBASIC16.72■□□□□ 0.27
RC3H1Q5TC82 FOLR1-203ENST00000393679 1331 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
RC3H1Q5TC82 IP6K2-221ENST00000449610 1673 ntTSL 2 BASIC16.72■□□□□ 0.27
RC3H1Q5TC82 DENND1C-202ENST00000543576 2395 ntAPPRIS ALT2 TSL 2 BASIC16.72■□□□□ 0.27
RC3H1Q5TC82 C22orf34-201ENST00000343999 2816 ntTSL 2 BASIC16.72■□□□□ 0.27
RC3H1Q5TC82 AC005089.1-201ENST00000619486 2241 ntBASIC16.72■□□□□ 0.27
RC3H1Q5TC82 ARSG-209ENST00000621439 2599 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
RC3H1Q5TC82 CDCA2-201ENST00000330560 3731 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
RC3H1Q5TC82 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC16.72■□□□□ 0.27
RC3H1Q5TC82 DBR1-201ENST00000260803 2666 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
RC3H1Q5TC82 KRTAP10-4-201ENST00000400374 1643 ntAPPRIS P2 BASIC16.72■□□□□ 0.27
RC3H1Q5TC82 AL627095.1-201ENST00000414775 321 ntBASIC16.72■□□□□ 0.27
RC3H1Q5TC82 AC025419.1-201ENST00000537250 690 ntTSL 3 BASIC16.72■□□□□ 0.27
RC3H1Q5TC82 AL391832.3-201ENST00000549744 846 ntTSL 3 BASIC16.72■□□□□ 0.27
RC3H1Q5TC82 NPLOC4-214ENST00000573876 560 ntTSL 4 BASIC16.72■□□□□ 0.27
RC3H1Q5TC82 AC091736.1-201ENST00000609370 305 ntBASIC16.72■□□□□ 0.27
RC3H1Q5TC82 OR4C3-202ENST00000611380 597 ntBASIC16.72■□□□□ 0.27
RC3H1Q5TC82 NEAT1-204ENST00000612303 572 ntTSL 3 BASIC16.72■□□□□ 0.27
RC3H1Q5TC82 C2orf27AP1-201ENST00000618128 586 ntBASIC16.72■□□□□ 0.27
RC3H1Q5TC82 Metazoa_SRP.210-201ENST00000637921 244 ntBASIC16.72■□□□□ 0.27
RC3H1Q5TC82 AC116631.1-201ENST00000640685 576 ntTSL 5 BASIC16.72■□□□□ 0.27
RC3H1Q5TC82 TOX3-201ENST00000219746 3233 ntAPPRIS P4 TSL 2 BASIC16.72■□□□□ 0.27
RC3H1Q5TC82 CACNA1G-205ENST00000360761 7497 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
RC3H1Q5TC82 ELN-203ENST00000320492 2991 ntAPPRIS ALT2 TSL 2 BASIC16.72■□□□□ 0.27
RC3H1Q5TC82 CEBPZOS-203ENST00000397226 1499 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
RC3H1Q5TC82 AKAP12-201ENST00000253332 6597 ntAPPRIS P4 TSL 1 (best) BASIC16.72■□□□□ 0.27
RC3H1Q5TC82 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
RC3H1Q5TC82 PAPOLA-223ENST00000557320 3264 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
RC3H1Q5TC82 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC16.72■□□□□ 0.27
RC3H1Q5TC82 OPCML-IT1-201ENST00000533859 2936 ntTSL 2 BASIC16.72■□□□□ 0.27
RC3H1Q5TC82 HRC-203ENST00000595625 2044 ntTSL 5 BASIC16.72■□□□□ 0.27
RC3H1Q5TC82 SLC38A5-212ENST00000619100 2100 ntTSL 2 BASIC16.72■□□□□ 0.27
RC3H1Q5TC82 SLC38A5-214ENST00000622196 2100 ntTSL 5 BASIC16.72■□□□□ 0.27
RC3H1Q5TC82 TNS2-201ENST00000314250 5010 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
RC3H1Q5TC82 BSCL2-203ENST00000360796 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
RC3H1Q5TC82 OLAH-203ENST00000378228 1675 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
RC3H1Q5TC82 LINC00943-204ENST00000537374 1688 ntTSL 5 BASIC16.72■□□□□ 0.27
RC3H1Q5TC82 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
RC3H1Q5TC82 NDUFAF6-201ENST00000396111 1869 ntTSL 5 BASIC16.71■□□□□ 0.27
RC3H1Q5TC82 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
RC3H1Q5TC82 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
RC3H1Q5TC82 DDX41-208ENST00000507955 2607 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
RC3H1Q5TC82 AL357054.3-201ENST00000607084 2055 ntTSL 5 BASIC16.71■□□□□ 0.27
RC3H1Q5TC82 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
RC3H1Q5TC82 NPNT-211ENST00000506666 2187 ntTSL 2 BASIC16.71■□□□□ 0.27
RC3H1Q5TC82 OSGIN1-201ENST00000343939 2391 ntTSL 2 BASIC16.71■□□□□ 0.27
RC3H1Q5TC82 TAF8-203ENST00000372982 1805 ntTSL 2 BASIC16.71■□□□□ 0.27
RC3H1Q5TC82 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
RC3H1Q5TC82 NAP1L2-201ENST00000373517 2550 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
RC3H1Q5TC82 FAM149A-202ENST00000356371 2997 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
RC3H1Q5TC82 GSTM1-204ENST00000369823 852 ntTSL 3 BASIC16.71■□□□□ 0.27
RC3H1Q5TC82 SUSD3-201ENST00000375469 1114 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
RC3H1Q5TC82 SLC2A11-208ENST00000405847 730 ntTSL 2 BASIC16.71■□□□□ 0.27
RC3H1Q5TC82 SMIM26-202ENST00000435844 575 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
RC3H1Q5TC82 PRKRIP1-202ENST00000462601 884 ntTSL 2 BASIC16.71■□□□□ 0.27
RC3H1Q5TC82 FPGT-205ENST00000482102 561 ntTSL 4 BASIC16.71■□□□□ 0.27
RC3H1Q5TC82 AC098591.1-202ENST00000507914 937 ntBASIC16.71■□□□□ 0.27
RC3H1Q5TC82 ST3GAL1P1-201ENST00000513810 1014 ntBASIC16.71■□□□□ 0.27
RC3H1Q5TC82 ALG10-202ENST00000538927 571 ntTSL 5 BASIC16.71■□□□□ 0.27
RC3H1Q5TC82 AC007608.2-201ENST00000569940 1146 ntTSL 3 BASIC16.71■□□□□ 0.27
RC3H1Q5TC82 RN7SL827P-201ENST00000607480 288 ntBASIC16.71■□□□□ 0.27
RC3H1Q5TC82 MAP3K14-205ENST00000617331 1049 ntTSL 5 BASIC16.71■□□□□ 0.27
RC3H1Q5TC82 RBP1-206ENST00000617459 667 ntTSL 2 BASIC16.71■□□□□ 0.27
RC3H1Q5TC82 IFI27-214ENST00000620396 599 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
RC3H1Q5TC82 PROP1-201ENST00000308304 1464 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
RC3H1Q5TC82 SH3GLB2-206ENST00000417224 1468 ntTSL 5 BASIC16.71■□□□□ 0.27
RC3H1Q5TC82 IKZF3-211ENST00000394189 1552 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
RC3H1Q5TC82 POLR2J2-203ENST00000476151 1598 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
RC3H1Q5TC82 BHMG1-201ENST00000457052 2749 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
RC3H1Q5TC82 CDC20-201ENST00000310955 1675 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
RC3H1Q5TC82 SDR16C5-203ENST00000522671 1988 ntTSL 2 BASIC16.71■□□□□ 0.27
RC3H1Q5TC82 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
RC3H1Q5TC82 LINC00324-201ENST00000315707 2082 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
RC3H1Q5TC82 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
RC3H1Q5TC82 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
RC3H1Q5TC82 RAB8A-202ENST00000586682 1315 ntTSL 2 BASIC16.7■□□□□ 0.26
RC3H1Q5TC82 DDX50-206ENST00000610822 2510 ntTSL 5 BASIC16.7■□□□□ 0.26
RC3H1Q5TC82 DCUN1D2-201ENST00000332592 2626 ntTSL 2 BASIC16.7■□□□□ 0.26
RC3H1Q5TC82 LRSAM1-203ENST00000373322 2849 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
RC3H1Q5TC82 ALOX15-202ENST00000570836 2784 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
RC3H1Q5TC82 ALG11-204ENST00000616513 1983 ntTSL 2 BASIC16.7■□□□□ 0.26
RC3H1Q5TC82 TTC26-207ENST00000478836 1794 ntTSL 2 BASIC16.7■□□□□ 0.26
RC3H1Q5TC82 AL512488.1-201ENST00000433544 1671 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
RC3H1Q5TC82 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
RC3H1Q5TC82 ST3GAL3-202ENST00000330208 1479 ntTSL 5 BASIC16.7■□□□□ 0.26
RC3H1Q5TC82 BLVRA-201ENST00000265523 1071 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
RC3H1Q5TC82 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
RC3H1Q5TC82 JPT2-203ENST00000382711 894 ntTSL 4 BASIC16.7■□□□□ 0.26
RC3H1Q5TC82 POLR3DP1-201ENST00000398689 1176 ntBASIC16.7■□□□□ 0.26
RC3H1Q5TC82 PRADC1P1-201ENST00000412317 525 ntBASIC16.7■□□□□ 0.26
RC3H1Q5TC82 PHBP3-201ENST00000412562 819 ntBASIC16.7■□□□□ 0.26
RC3H1Q5TC82 AL121972.2-201ENST00000431108 556 ntTSL 4 BASIC16.7■□□□□ 0.26
RC3H1Q5TC82 SATB2-AS1-202ENST00000441234 468 ntTSL 3 BASIC16.7■□□□□ 0.26
RC3H1Q5TC82 NUP210P2-201ENST00000510577 282 ntBASIC16.7■□□□□ 0.26
RC3H1Q5TC82 AC100797.1-201ENST00000520760 316 ntTSL 2 BASIC16.7■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 50.2 ms