Protein–RNA interactions for Protein: Q9Y2P8

RCL1, RNA 3'-terminal phosphate cyclase-like protein, humanhuman

Known RBP Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCL1Q9Y2P8 PLOD2-209ENST00000494950 2908 ntTSL 2 BASIC11.22□□□□□ -0.61
RCL1Q9Y2P8 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC11.22□□□□□ -0.61
RCL1Q9Y2P8 SERBP1P5-201ENST00000510079 1181 ntBASIC11.22□□□□□ -0.61
RCL1Q9Y2P8 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
RCL1Q9Y2P8 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC11.22□□□□□ -0.61
RCL1Q9Y2P8 API5-211ENST00000534695 560 ntTSL 5 BASIC11.22□□□□□ -0.61
RCL1Q9Y2P8 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC11.22□□□□□ -0.61
RCL1Q9Y2P8 HNF1A-208ENST00000541395 3332 ntTSL 2 BASIC11.22□□□□□ -0.61
RCL1Q9Y2P8 NPLOC4-209ENST00000572760 946 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
RCL1Q9Y2P8 PPY2P-201ENST00000582808 702 ntBASIC11.22□□□□□ -0.61
RCL1Q9Y2P8 PPY2P-202ENST00000583761 657 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
RCL1Q9Y2P8 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC11.22□□□□□ -0.61
RCL1Q9Y2P8 YIF1B-215ENST00000592246 936 ntTSL 3 BASIC11.22□□□□□ -0.61
RCL1Q9Y2P8 AC025048.1-201ENST00000592317 542 ntTSL 4 BASIC11.22□□□□□ -0.61
RCL1Q9Y2P8 CYP4F23P-201ENST00000593402 1579 ntBASIC11.22□□□□□ -0.61
RCL1Q9Y2P8 AC008687.7-203ENST00000598442 551 ntTSL 4 BASIC11.22□□□□□ -0.61
RCL1Q9Y2P8 NEAT1-203ENST00000601801 487 ntTSL 4 BASIC11.22□□□□□ -0.61
RCL1Q9Y2P8 AL354718.3-201ENST00000616414 581 ntBASIC11.22□□□□□ -0.61
RCL1Q9Y2P8 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
RCL1Q9Y2P8 AC139530.3-201ENST00000620344 690 ntBASIC11.22□□□□□ -0.61
RCL1Q9Y2P8 AL132642.2-201ENST00000623423 1998 ntBASIC11.22□□□□□ -0.61
RCL1Q9Y2P8 CR382287.1-201ENST00000623954 586 ntBASIC11.22□□□□□ -0.61
RCL1Q9Y2P8 AC092139.4-201ENST00000624318 2794 ntBASIC11.22□□□□□ -0.61
RCL1Q9Y2P8 FER1L5-207ENST00000641731 6294 ntAPPRIS ALT2 BASIC11.22□□□□□ -0.61
RCL1Q9Y2P8 PUM2-203ENST00000361078 6251 ntTSL 2 BASIC11.22□□□□□ -0.61
RCL1Q9Y2P8 INTS6L-201ENST00000370752 3793 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
RCL1Q9Y2P8 F2RL3-201ENST00000248076 3473 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
RCL1Q9Y2P8 OVOL1-201ENST00000335987 3034 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
RCL1Q9Y2P8 RFWD3-202ENST00000571750 3033 ntAPPRIS P1 TSL 2 BASIC11.22□□□□□ -0.61
RCL1Q9Y2P8 SSX2IP-201ENST00000342203 5835 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
RCL1Q9Y2P8 TJAP1-201ENST00000259751 2720 ntAPPRIS P1 TSL 2 BASIC11.22□□□□□ -0.61
RCL1Q9Y2P8 DBIL5P-203ENST00000536214 2677 ntBASIC11.22□□□□□ -0.61
RCL1Q9Y2P8 HLA-E-201ENST00000376630 2601 ntAPPRIS P1 BASIC11.22□□□□□ -0.61
RCL1Q9Y2P8 AL031728.1-201ENST00000449034 2479 ntTSL 3 BASIC11.21□□□□□ -0.61
RCL1Q9Y2P8 ZNF529-209ENST00000591340 4331 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
RCL1Q9Y2P8 PTCD2-212ENST00000543322 2029 ntTSL 2 BASIC11.21□□□□□ -0.61
RCL1Q9Y2P8 LINC01662-201ENST00000342888 1859 ntTSL 2 BASIC11.21□□□□□ -0.61
RCL1Q9Y2P8 RBM15-205ENST00000618772 3431 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
RCL1Q9Y2P8 SMTNL1-202ENST00000527972 1649 ntAPPRIS P2 TSL 5 BASIC11.21□□□□□ -0.61
RCL1Q9Y2P8 CCDC114-201ENST00000315396 3215 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
RCL1Q9Y2P8 EPB41L5-205ENST00000452780 6410 ntTSL 5 BASIC11.21□□□□□ -0.61
RCL1Q9Y2P8 AC009533.1-201ENST00000539757 3158 ntBASIC11.21□□□□□ -0.61
RCL1Q9Y2P8 DFFB-201ENST00000338895 3105 ntTSL 2 BASIC11.21□□□□□ -0.61
RCL1Q9Y2P8 TMEM182-202ENST00000409528 3112 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
RCL1Q9Y2P8 LRRC8A-201ENST00000259324 4619 ntAPPRIS P1 TSL 2 BASIC11.21□□□□□ -0.61
RCL1Q9Y2P8 KIAA1324-210ENST00000529753 2903 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
RCL1Q9Y2P8 IFFO1-206ENST00000465801 2850 ntTSL 5 BASIC11.21□□□□□ -0.61
RCL1Q9Y2P8 TNRC6C-207ENST00000588847 8527 ntAPPRIS P4 TSL 5 BASIC11.21□□□□□ -0.61
RCL1Q9Y2P8 AC008132.1-202ENST00000342005 1389 ntBASIC11.21□□□□□ -0.61
RCL1Q9Y2P8 PYGL-206ENST00000544180 2696 ntTSL 2 BASIC11.21□□□□□ -0.61
RCL1Q9Y2P8 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC11.21□□□□□ -0.61
RCL1Q9Y2P8 ARFIP1-202ENST00000356064 1302 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
RCL1Q9Y2P8 TXNRD1-214ENST00000526691 3974 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
RCL1Q9Y2P8 AC010536.1-201ENST00000538868 2611 ntBASIC11.21□□□□□ -0.61
RCL1Q9Y2P8 HS6ST1-201ENST00000259241 3932 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
RCL1Q9Y2P8 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
RCL1Q9Y2P8 C8orf74-201ENST00000304519 1036 ntAPPRIS P2 TSL 1 (best) BASIC11.21□□□□□ -0.61
RCL1Q9Y2P8 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
RCL1Q9Y2P8 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.61
RCL1Q9Y2P8 FCRLB-203ENST00000367945 1131 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
RCL1Q9Y2P8 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
RCL1Q9Y2P8 RPL14-202ENST00000396203 916 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
RCL1Q9Y2P8 GAPDH-203ENST00000396858 1292 ntTSL 5 BASIC11.21□□□□□ -0.61
RCL1Q9Y2P8 SAP30L-202ENST00000426761 777 ntTSL 3 BASIC11.21□□□□□ -0.61
RCL1Q9Y2P8 RPL28-203ENST00000428193 573 ntTSL 2 BASIC11.21□□□□□ -0.61
RCL1Q9Y2P8 RPL28-204ENST00000431533 590 ntTSL 2 BASIC11.21□□□□□ -0.61
RCL1Q9Y2P8 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC11.21□□□□□ -0.61
RCL1Q9Y2P8 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
RCL1Q9Y2P8 KLF2P1-201ENST00000447438 1042 ntBASIC11.21□□□□□ -0.61
RCL1Q9Y2P8 HIST2H2BB-201ENST00000449108 381 ntBASIC11.21□□□□□ -0.61
RCL1Q9Y2P8 TMEM191A-209ENST00000452055 788 ntTSL 2 BASIC11.21□□□□□ -0.61
RCL1Q9Y2P8 AC006122.1-201ENST00000493323 440 ntBASIC11.21□□□□□ -0.61
RCL1Q9Y2P8 AC011773.1-201ENST00000520129 468 ntTSL 5 BASIC11.21□□□□□ -0.61
RCL1Q9Y2P8 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
RCL1Q9Y2P8 RPL28-207ENST00000558815 616 ntTSL 2 BASIC11.21□□□□□ -0.61
RCL1Q9Y2P8 NAA60-208ENST00000570819 833 ntTSL 2 BASIC11.21□□□□□ -0.61
RCL1Q9Y2P8 AC005498.2-205ENST00000593218 784 ntBASIC11.21□□□□□ -0.61
RCL1Q9Y2P8 AP001160.2-201ENST00000596071 487 ntBASIC11.21□□□□□ -0.61
RCL1Q9Y2P8 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
RCL1Q9Y2P8 AC133540.1-201ENST00000620845 1019 ntBASIC11.21□□□□□ -0.61
RCL1Q9Y2P8 ANKRD20A7P-201ENST00000402318 2414 ntBASIC11.21□□□□□ -0.61
RCL1Q9Y2P8 BTBD3-203ENST00000399006 4826 ntAPPRIS ALT1 TSL 5 BASIC11.21□□□□□ -0.61
RCL1Q9Y2P8 MLPH-202ENST00000338530 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.62
RCL1Q9Y2P8 AC241585.2-201ENST00000578899 2307 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
RCL1Q9Y2P8 TPO-204ENST00000382198 2283 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
RCL1Q9Y2P8 ZMIZ1-202ENST00000446377 6686 ntTSL 5 BASIC11.21□□□□□ -0.62
RCL1Q9Y2P8 TMEM120B-204ENST00000449592 7461 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
RCL1Q9Y2P8 UNC93A-201ENST00000230256 2116 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
RCL1Q9Y2P8 TRMT1-202ENST00000357720 2142 ntAPPRIS P3 TSL 2 BASIC11.21□□□□□ -0.62
RCL1Q9Y2P8 TRAPPC2L-211ENST00000565504 3102 ntTSL 2 BASIC11.21□□□□□ -0.62
RCL1Q9Y2P8 AC112176.1-201ENST00000565428 3024 ntBASIC11.21□□□□□ -0.62
RCL1Q9Y2P8 RUBCN-202ENST00000296343 2919 ntAPPRIS P3 TSL 1 (best) BASIC11.21□□□□□ -0.62
RCL1Q9Y2P8 CA10-202ENST00000442502 2935 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
RCL1Q9Y2P8 KCNMA1-265ENST00000639591 3888 ntAPPRIS ALT2 TSL 5 BASIC11.21□□□□□ -0.62
RCL1Q9Y2P8 CPLX4-202ENST00000587244 1916 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
RCL1Q9Y2P8 AMT-239ENST00000636865 1914 ntTSL 5 BASIC11.21□□□□□ -0.62
RCL1Q9Y2P8 CYP11B1-204ENST00000517471 1874 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
RCL1Q9Y2P8 SLC6A7-201ENST00000230671 3739 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
RCL1Q9Y2P8 RBM22P2-201ENST00000393978 1814 ntBASIC11.21□□□□□ -0.62
RCL1Q9Y2P8 THUMPD3-AS1-212ENST00000520447 1809 ntTSL 5 BASIC11.21□□□□□ -0.62
Retrieved 100 of 98,524 protein–RNA pairs in 50 ms