Protein–RNA interactions for Protein: P56159

GFRA1, GDNF family receptor alpha-1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA1P56159 FKBP4P8-201ENST00000610931 1369 ntBASIC12.19□□□□□ -0.46
GFRA1P56159 LINC02537-201ENST00000635943 1367 ntTSL 4 BASIC12.19□□□□□ -0.46
GFRA1P56159 RFESD-201ENST00000311364 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
GFRA1P56159 AC007336.3-201ENST00000623886 2160 ntBASIC12.19□□□□□ -0.46
GFRA1P56159 MSH5-202ENST00000375740 2669 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
GFRA1P56159 ADAM15-209ENST00000449910 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
GFRA1P56159 AP001258.1-201ENST00000501817 2110 ntTSL 5 BASIC12.19□□□□□ -0.46
GFRA1P56159 USP31-203ENST00000567975 2142 ntTSL 2 BASIC12.19□□□□□ -0.46
GFRA1P56159 EDIL3-201ENST00000296591 4727 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
GFRA1P56159 ARVCF-203ENST00000406259 2871 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
GFRA1P56159 SMOC2-202ENST00000356284 3117 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
GFRA1P56159 RRN3P3-202ENST00000551766 3366 ntTSL 2 BASIC12.19□□□□□ -0.46
GFRA1P56159 TMPRSS4-213ENST00000522824 2052 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
GFRA1P56159 EGLN3-205ENST00000547327 2849 ntBASIC12.19□□□□□ -0.46
GFRA1P56159 AC138894.1-201ENST00000635887 2824 ntTSL 5 BASIC12.19□□□□□ -0.46
GFRA1P56159 MRPL33-201ENST00000296102 518 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
GFRA1P56159 OR4S1-201ENST00000319988 930 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
GFRA1P56159 TSC22D3-202ENST00000372382 1216 ntTSL 3 BASIC12.19□□□□□ -0.46
GFRA1P56159 MRPL33-202ENST00000379666 404 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
GFRA1P56159 CHEK2-203ENST00000382565 696 ntTSL 5 BASIC12.19□□□□□ -0.46
GFRA1P56159 IGHV5-51-201ENST00000390626 410 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
GFRA1P56159 TUBB2BP1-201ENST00000404155 871 ntBASIC12.19□□□□□ -0.46
GFRA1P56159 LINC02026-202ENST00000414309 772 ntTSL 3 BASIC12.19□□□□□ -0.46
GFRA1P56159 Z97652.1-201ENST00000415176 329 ntTSL 5 BASIC12.19□□□□□ -0.46
GFRA1P56159 AL355482.2-201ENST00000428646 1145 ntTSL 2 BASIC12.19□□□□□ -0.46
GFRA1P56159 AL512599.1-201ENST00000430724 685 ntBASIC12.19□□□□□ -0.46
GFRA1P56159 EMP1-203ENST00000431267 1039 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
GFRA1P56159 AC004895.1-202ENST00000435547 547 ntTSL 5 BASIC12.19□□□□□ -0.46
GFRA1P56159 MIR503HG-202ENST00000440570 760 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
GFRA1P56159 Metazoa_SRP.100-201ENST00000447610 282 ntBASIC12.19□□□□□ -0.46
GFRA1P56159 FKBP1B-205ENST00000452109 953 ntTSL 3 BASIC12.19□□□□□ -0.46
GFRA1P56159 AL445471.1-201ENST00000456316 820 ntTSL 5 BASIC12.19□□□□□ -0.46
GFRA1P56159 AC078785.1-204ENST00000460707 764 ntTSL 3 BASIC12.19□□□□□ -0.46
GFRA1P56159 ALG1L7P-201ENST00000502317 768 ntBASIC12.19□□□□□ -0.46
GFRA1P56159 TRPC7-AS1-201ENST00000514459 460 ntTSL 3 BASIC12.19□□□□□ -0.46
GFRA1P56159 AC055811.3-201ENST00000584952 686 ntBASIC12.19□□□□□ -0.46
GFRA1P56159 AL160191.2-201ENST00000603975 601 ntBASIC12.19□□□□□ -0.46
GFRA1P56159 CRABP2-204ENST00000621784 1033 ntAPPRIS P1 TSL 3 BASIC12.19□□□□□ -0.46
GFRA1P56159 MBOAT4-201ENST00000320542 1512 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
GFRA1P56159 GBAP1-208ENST00000566701 1546 ntBASIC12.19□□□□□ -0.46
GFRA1P56159 ABCG1-203ENST00000361802 3034 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
GFRA1P56159 MEX3B-201ENST00000329713 3528 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
GFRA1P56159 OAS3-201ENST00000228928 6719 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
GFRA1P56159 ATP2C1-214ENST00000508532 4969 ntAPPRIS ALT1 TSL 1 (best) BASIC12.19□□□□□ -0.46
GFRA1P56159 TNIK-202ENST00000341852 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
GFRA1P56159 LSS-201ENST00000356396 2995 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
GFRA1P56159 SNCAIP-222ENST00000542191 2729 ntTSL 5 BASIC12.19□□□□□ -0.46
GFRA1P56159 ABLIM2-215ENST00000545242 1972 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
GFRA1P56159 KRT8P25-201ENST00000473150 1456 ntBASIC12.19□□□□□ -0.46
GFRA1P56159 CA6-205ENST00000480186 1493 ntTSL 2 BASIC12.19□□□□□ -0.46
GFRA1P56159 ADAMTS10-201ENST00000270328 4194 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
GFRA1P56159 FBXL16-201ENST00000324361 3411 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
GFRA1P56159 AUTS2-217ENST00000611706 4583 ntTSL 5 BASIC12.19□□□□□ -0.46
GFRA1P56159 SIGLEC9-201ENST00000250360 1690 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
GFRA1P56159 PTCD2-207ENST00000503868 1653 ntTSL 2 BASIC12.19□□□□□ -0.46
GFRA1P56159 RMND5B-212ENST00000542098 1681 ntTSL 5 BASIC12.19□□□□□ -0.46
GFRA1P56159 CATSPERE-203ENST00000366534 3333 ntAPPRIS ALT2 TSL 2 BASIC12.19□□□□□ -0.46
GFRA1P56159 SHROOM1-203ENST00000378679 4019 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
GFRA1P56159 AC036214.1-201ENST00000502766 2126 ntTSL 2 BASIC12.19□□□□□ -0.46
GFRA1P56159 PRDM16-203ENST00000378391 5447 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
GFRA1P56159 ABCG2-201ENST00000237612 4479 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
GFRA1P56159 PLAT-203ENST00000429089 2599 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
GFRA1P56159 NME1-209ENST00000511355 1645 ntTSL 5 BASIC12.19□□□□□ -0.46
GFRA1P56159 PRELP-201ENST00000343110 5747 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
GFRA1P56159 SHISA5-206ENST00000426002 1839 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
GFRA1P56159 PAPOLA-201ENST00000216277 4519 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
GFRA1P56159 NHLH2-202ENST00000369506 7226 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
GFRA1P56159 CNN2-202ENST00000348419 2033 ntTSL 2 BASIC12.18□□□□□ -0.46
GFRA1P56159 PGM1-202ENST00000371084 2472 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
GFRA1P56159 SH3KBP1-205ENST00000397821 4731 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
GFRA1P56159 RBM25-204ENST00000526754 1567 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
GFRA1P56159 NRAS-201ENST00000369535 4449 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
GFRA1P56159 METTL13-203ENST00000367737 2865 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
GFRA1P56159 KLK4-201ENST00000324041 1347 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
GFRA1P56159 FAM69C-202ENST00000400291 1329 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
GFRA1P56159 ADAM33-201ENST00000350009 3480 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
GFRA1P56159 UGT3A2-201ENST00000282507 2355 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
GFRA1P56159 TAB1-201ENST00000216160 3237 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
GFRA1P56159 ZNF691-201ENST00000372502 1910 ntAPPRIS ALT2 TSL 2 BASIC12.18□□□□□ -0.46
GFRA1P56159 SLC44A3-209ENST00000532427 1912 ntTSL 2 BASIC12.18□□□□□ -0.46
GFRA1P56159 JAKMIP3-201ENST00000298622 6626 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
GFRA1P56159 CALML6-201ENST00000307786 1101 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
GFRA1P56159 S100A3-202ENST00000368713 856 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
GFRA1P56159 MRPS12-202ENST00000402029 929 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
GFRA1P56159 SERF2-206ENST00000409291 807 ntTSL 3 BASIC12.18□□□□□ -0.46
GFRA1P56159 EVA1A-204ENST00000410071 777 ntAPPRIS P2 TSL 3 BASIC12.18□□□□□ -0.46
GFRA1P56159 AL591242.1-201ENST00000422284 343 ntTSL 2 BASIC12.18□□□□□ -0.46
GFRA1P56159 TIMM17B-204ENST00000465150 964 ntTSL 2 BASIC12.18□□□□□ -0.46
GFRA1P56159 UBE2D3-221ENST00000507845 577 ntTSL 4 BASIC12.18□□□□□ -0.46
GFRA1P56159 UBR5-AS1-202ENST00000520820 800 ntTSL 2 BASIC12.18□□□□□ -0.46
GFRA1P56159 BCDIN3D-AS1-202ENST00000549124 468 ntTSL 3 BASIC12.18□□□□□ -0.46
GFRA1P56159 AC026470.4-201ENST00000565812 308 ntTSL 3 BASIC12.18□□□□□ -0.46
GFRA1P56159 LGALS9C-215ENST00000584941 1104 ntTSL 5 BASIC12.18□□□□□ -0.46
GFRA1P56159 C19orf70-203ENST00000587589 577 ntTSL 5 BASIC12.18□□□□□ -0.46
GFRA1P56159 C19orf53-202ENST00000588234 873 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
GFRA1P56159 AC010632.2-201ENST00000588369 1224 ntBASIC12.18□□□□□ -0.46
GFRA1P56159 TYMSP2-201ENST00000589501 424 ntBASIC12.18□□□□□ -0.46
GFRA1P56159 SELENOW-212ENST00000601048 888 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
GFRA1P56159 PACRG-AS3-203ENST00000614038 1246 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
GFRA1P56159 AC113385.2-201ENST00000614465 762 ntBASIC12.18□□□□□ -0.46
Retrieved 100 of 98,524 protein–RNA pairs in 39.9 ms