Protein–RNA interactions for Protein: P55056

APOC4, Apolipoprotein C-IV, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC4P55056 CBFA2T3-202ENST00000327483 4033 ntAPPRIS ALT2 TSL 1 (best) BASIC10.03□□□□□ -0.8
APOC4P55056 PGLYRP4-202ENST00000368739 2116 ntAPPRIS ALT1 TSL 5 BASIC10.03□□□□□ -0.8
APOC4P55056 PPCDC-201ENST00000342932 2250 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
APOC4P55056 SRC-204ENST00000373578 4630 ntAPPRIS P1 TSL 5 BASIC10.03□□□□□ -0.8
APOC4P55056 HMGCS2-201ENST00000369406 2428 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
APOC4P55056 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC10.03□□□□□ -0.8
APOC4P55056 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
APOC4P55056 SEZ6L-202ENST00000343706 2898 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
APOC4P55056 METTL13-202ENST00000362019 3022 ntTSL 2 BASIC10.03□□□□□ -0.8
APOC4P55056 CHD4-211ENST00000544484 6554 ntTSL 2 BASIC10.03□□□□□ -0.8
APOC4P55056 TSPAN18-207ENST00000520358 3316 ntAPPRIS P1 TSL 5 BASIC10.03□□□□□ -0.8
APOC4P55056 ATG9B-203ENST00000469530 3489 ntAPPRIS P1 TSL 5 BASIC10.03□□□□□ -0.8
APOC4P55056 PSME2-201ENST00000216802 1404 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
APOC4P55056 DAXX-201ENST00000266000 2606 ntAPPRIS P2 TSL 1 (best) BASIC10.03□□□□□ -0.8
APOC4P55056 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC10.03□□□□□ -0.8
APOC4P55056 GPSM1-202ENST00000354753 3533 ntAPPRIS ALT2 TSL 5 BASIC10.03□□□□□ -0.8
APOC4P55056 SETD7-203ENST00000406354 1127 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
APOC4P55056 MIR1301-201ENST00000408518 82 ntBASIC10.03□□□□□ -0.8
APOC4P55056 TRPM2-AS-201ENST00000423310 586 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
APOC4P55056 RPL37A-203ENST00000427280 698 ntTSL 5 BASIC10.03□□□□□ -0.8
APOC4P55056 IGLV9-49-201ENST00000427632 409 ntAPPRIS P1 BASIC10.03□□□□□ -0.8
APOC4P55056 AL512599.1-201ENST00000430724 685 ntBASIC10.03□□□□□ -0.8
APOC4P55056 IZUMO1R-202ENST00000440961 805 ntAPPRIS ALT2 TSL 5 BASIC10.03□□□□□ -0.8
APOC4P55056 AC114501.1-201ENST00000445949 172 ntBASIC10.03□□□□□ -0.8
APOC4P55056 VENTXP4-201ENST00000449029 958 ntBASIC10.03□□□□□ -0.8
APOC4P55056 AL390961.2-201ENST00000454991 472 ntTSL 3 BASIC10.03□□□□□ -0.8
APOC4P55056 RN7SL582P-201ENST00000491078 279 ntBASIC10.03□□□□□ -0.8
APOC4P55056 REEP5-205ENST00000504247 480 ntTSL 5 BASIC10.03□□□□□ -0.8
APOC4P55056 REEP5-207ENST00000513339 1139 ntTSL 2 BASIC10.03□□□□□ -0.8
APOC4P55056 HDAC2-206ENST00000519108 2000 ntTSL 2 BASIC10.03□□□□□ -0.8
APOC4P55056 KRT18P37-201ENST00000520711 1282 ntBASIC10.03□□□□□ -0.8
APOC4P55056 C8orf31-207ENST00000524181 1199 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
APOC4P55056 GMPR2-206ENST00000557854 2025 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
APOC4P55056 LINC00677-201ENST00000558224 486 ntTSL 3 BASIC10.03□□□□□ -0.8
APOC4P55056 LINC02252-201ENST00000565706 487 ntTSL 3 BASIC10.03□□□□□ -0.8
APOC4P55056 LINC01922-202ENST00000567168 1704 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
APOC4P55056 AC137723.1-201ENST00000584705 709 ntTSL 3 BASIC10.03□□□□□ -0.8
APOC4P55056 AC095350.1-204ENST00000585405 616 ntTSL 5 BASIC10.03□□□□□ -0.8
APOC4P55056 AC068675.1-201ENST00000588996 561 ntTSL 4 BASIC10.03□□□□□ -0.8
APOC4P55056 RPL37A-211ENST00000598925 775 ntTSL 5 BASIC10.03□□□□□ -0.8
APOC4P55056 FO393412.1-201ENST00000619841 382 ntBASIC10.03□□□□□ -0.8
APOC4P55056 TTC23L-209ENST00000638320 1185 ntAPPRIS ALT2 TSL 5 BASIC10.03□□□□□ -0.8
APOC4P55056 DMTN-205ENST00000432128 2508 ntTSL 5 BASIC10.03□□□□□ -0.8
APOC4P55056 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC10.03□□□□□ -0.8
APOC4P55056 CANX-202ENST00000452673 4207 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
APOC4P55056 PGAP2-201ENST00000278243 2062 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
APOC4P55056 UCKL1-AS1-201ENST00000623569 3602 ntBASIC10.03□□□□□ -0.8
APOC4P55056 PPM1M-203ENST00000409502 1790 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
APOC4P55056 HTR7-203ENST00000371719 3033 ntAPPRIS ALT1 TSL 1 (best) BASIC10.03□□□□□ -0.8
APOC4P55056 EFHD1-207ENST00000611312 1490 ntTSL 5 BASIC10.03□□□□□ -0.8
APOC4P55056 PLA2G16-201ENST00000323646 2594 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
APOC4P55056 HSD17B4-215ENST00000510025 2589 ntTSL 2 BASIC10.03□□□□□ -0.8
APOC4P55056 RALGPS1-201ENST00000259351 6336 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
APOC4P55056 SLC19A2-201ENST00000236137 3671 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
APOC4P55056 PCDHGA3-201ENST00000253812 4771 ntAPPRIS P3 TSL 1 (best) BASIC10.03□□□□□ -0.8
APOC4P55056 LRRC15-201ENST00000347624 5883 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
APOC4P55056 TJP3-202ENST00000541714 3350 ntAPPRIS P3 TSL 2 BASIC10.03□□□□□ -0.8
APOC4P55056 PSD-209ENST00000611678 3382 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
APOC4P55056 AC020917.4-201ENST00000623994 1999 ntBASIC10.03□□□□□ -0.8
APOC4P55056 CDIP1-205ENST00000563332 2774 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
APOC4P55056 GGT1-203ENST00000400382 2628 ntAPPRIS P1 TSL 2 BASIC10.03□□□□□ -0.8
APOC4P55056 ADCY3-202ENST00000405392 4397 ntAPPRIS ALT1 TSL 1 (best) BASIC10.03□□□□□ -0.8
APOC4P55056 XPNPEP1-201ENST00000322238 2467 ntTSL 1 (best) BASIC10.02□□□□□ -0.8
APOC4P55056 SIGLECL1-208ENST00000614422 1516 ntAPPRIS P3 TSL 1 (best) BASIC10.02□□□□□ -0.8
APOC4P55056 TMEM254-213ENST00000613758 2154 ntTSL 1 (best) BASIC10.02□□□□□ -0.8
APOC4P55056 KRT8P42-201ENST00000405771 1399 ntBASIC10.02□□□□□ -0.8
APOC4P55056 PRR30-201ENST00000335524 2008 ntAPPRIS P2 TSL 1 (best) BASIC10.02□□□□□ -0.8
APOC4P55056 AC005899.8-201ENST00000625127 3153 ntTSL 5 BASIC10.02□□□□□ -0.8
APOC4P55056 LPCAT4-209ENST00000617710 1719 ntTSL 5 BASIC10.02□□□□□ -0.8
APOC4P55056 SAMD4B-201ENST00000314471 4519 ntAPPRIS P3 TSL 1 (best) BASIC10.02□□□□□ -0.81
APOC4P55056 FADS1-206ENST00000460649 1559 ntTSL 2 BASIC10.02□□□□□ -0.81
APOC4P55056 AL513497.1-201ENST00000624273 2083 ntBASIC10.02□□□□□ -0.81
APOC4P55056 HNRNPUL1-204ENST00000392006 3555 ntAPPRIS P2 TSL 1 (best) BASIC10.02□□□□□ -0.81
APOC4P55056 DGKZ-204ENST00000454345 4086 ntAPPRIS ALT2 TSL 1 (best) BASIC10.02□□□□□ -0.81
APOC4P55056 PCCB-210ENST00000471595 6090 ntAPPRIS ALT2 TSL 1 (best) BASIC10.02□□□□□ -0.81
APOC4P55056 MBNL1-AS1-202ENST00000608395 6585 ntTSL 2 BASIC10.02□□□□□ -0.81
APOC4P55056 TRIM65-201ENST00000269383 3439 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
APOC4P55056 ZCCHC14-201ENST00000268616 7102 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
APOC4P55056 ADM2-202ENST00000395738 4276 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
APOC4P55056 CCNF-202ENST00000397066 4283 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
APOC4P55056 SLC9B2-202ENST00000394785 3126 ntAPPRIS P1 TSL 2 BASIC10.02□□□□□ -0.81
APOC4P55056 OR6F1-204ENST00000641470 1762 ntAPPRIS P1 BASIC10.02□□□□□ -0.81
APOC4P55056 POLR2G-201ENST00000301788 827 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
APOC4P55056 ATP5C1-201ENST00000335698 1078 ntAPPRIS P3 TSL 1 (best) BASIC10.02□□□□□ -0.81
APOC4P55056 TDP2-201ENST00000341060 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC10.02□□□□□ -0.81
APOC4P55056 MAGOH-202ENST00000371470 756 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
APOC4P55056 HCRTR1-201ENST00000373705 1170 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
APOC4P55056 ZNRD1-203ENST00000376782 736 ntAPPRIS P1 TSL 2 BASIC10.02□□□□□ -0.81
APOC4P55056 EIF4E2-205ENST00000409394 604 ntTSL 3 BASIC10.02□□□□□ -0.81
APOC4P55056 PPIL3-205ENST00000409449 756 ntTSL 5 BASIC10.02□□□□□ -0.81
APOC4P55056 ELFN1-AS1-201ENST00000415399 636 ntTSL 5 BASIC10.02□□□□□ -0.81
APOC4P55056 AL590093.1-201ENST00000416119 623 ntTSL 5 BASIC10.02□□□□□ -0.81
APOC4P55056 AL355334.1-201ENST00000417713 215 ntBASIC10.02□□□□□ -0.81
APOC4P55056 AL080243.1-201ENST00000423293 1060 ntBASIC10.02□□□□□ -0.81
APOC4P55056 FAM138B-202ENST00000446648 1130 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
APOC4P55056 Metazoa_SRP.100-201ENST00000447610 282 ntBASIC10.02□□□□□ -0.81
APOC4P55056 FAM138C-202ENST00000449442 1126 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
APOC4P55056 BPIFB5P-201ENST00000457066 1099 ntBASIC10.02□□□□□ -0.81
APOC4P55056 TMEM14B-208ENST00000467317 1224 ntTSL 2 BASIC10.02□□□□□ -0.81
APOC4P55056 TLN2-202ENST00000472902 2116 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Retrieved 100 of 98,524 protein–RNA pairs in 49.1 ms