Protein–RNA interactions for Protein: Q8TAP4

LMO3, LIM domain only protein 3, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3Q8TAP4 BMT2-201ENST00000297145 3981 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
LMO3Q8TAP4 KCTD7-206ENST00000639828 5951 ntAPPRIS P3 TSL 2 BASIC14.54□□□□□ -0.08
LMO3Q8TAP4 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
LMO3Q8TAP4 UNC5CL-201ENST00000244565 3136 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
LMO3Q8TAP4 CCNI-201ENST00000237654 2772 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
LMO3Q8TAP4 ELMOD3-201ENST00000315658 2685 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
LMO3Q8TAP4 ACOX2-201ENST00000302819 2426 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
LMO3Q8TAP4 SLC26A6-202ENST00000337000 2317 ntTSL 2 BASIC14.53□□□□□ -0.08
LMO3Q8TAP4 C7orf57-203ENST00000430738 2056 ntTSL 5 BASIC14.53□□□□□ -0.08
LMO3Q8TAP4 PDE9A-202ENST00000328862 1956 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
LMO3Q8TAP4 CNTNAP2-207ENST00000628930 1944 ntTSL 2 BASIC14.53□□□□□ -0.08
LMO3Q8TAP4 STRAP-202ENST00000419869 1866 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
LMO3Q8TAP4 AL365181.1-201ENST00000564032 1828 ntBASIC14.53□□□□□ -0.08
LMO3Q8TAP4 ATP6V0D1-218ENST00000602876 1554 ntTSL 5 BASIC14.53□□□□□ -0.08
LMO3Q8TAP4 BAIAP3-216ENST00000628027 4732 ntTSL 5 BASIC14.53□□□□□ -0.08
LMO3Q8TAP4 LGALS4-201ENST00000307751 1535 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
LMO3Q8TAP4 ZSCAN5DP-201ENST00000600684 1488 ntBASIC14.53□□□□□ -0.08
LMO3Q8TAP4 GIPC3-201ENST00000322315 4335 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
LMO3Q8TAP4 DLGAP3-202ENST00000373347 3856 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
LMO3Q8TAP4 UPK1A-201ENST00000222275 1223 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
LMO3Q8TAP4 IL23A-201ENST00000228534 1046 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
LMO3Q8TAP4 TMSB15A-201ENST00000289373 685 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
LMO3Q8TAP4 HPGD-201ENST00000296521 1171 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
LMO3Q8TAP4 GAD1-201ENST00000344257 1029 ntTSL 5 BASIC14.53□□□□□ -0.08
LMO3Q8TAP4 RPS9-202ENST00000391751 510 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
LMO3Q8TAP4 TSPO-203ENST00000396265 1075 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
LMO3Q8TAP4 NUPL2-202ENST00000410002 680 ntTSL 2 BASIC14.53□□□□□ -0.08
LMO3Q8TAP4 NOC2LP1-201ENST00000450578 752 ntBASIC14.53□□□□□ -0.08
LMO3Q8TAP4 TIMM17B-204ENST00000465150 964 ntTSL 2 BASIC14.53□□□□□ -0.08
LMO3Q8TAP4 AC092535.3-201ENST00000504969 468 ntTSL 3 BASIC14.53□□□□□ -0.08
LMO3Q8TAP4 TVP23C-205ENST00000518321 1080 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
LMO3Q8TAP4 AP002803.1-201ENST00000528836 498 ntBASIC14.53□□□□□ -0.08
LMO3Q8TAP4 EMP2-203ENST00000536829 781 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
LMO3Q8TAP4 RHOQP1-201ENST00000555758 579 ntBASIC14.53□□□□□ -0.08
LMO3Q8TAP4 AC020659.1-202ENST00000564432 531 ntTSL 5 BASIC14.53□□□□□ -0.08
LMO3Q8TAP4 LINC02176-201ENST00000569104 598 ntTSL 4 BASIC14.53□□□□□ -0.08
LMO3Q8TAP4 AC005696.1-201ENST00000572876 443 ntTSL 2 BASIC14.53□□□□□ -0.08
LMO3Q8TAP4 GEMIN7-204ENST00000591747 576 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
LMO3Q8TAP4 SIRT2-219ENST00000613542 1170 ntTSL 5 BASIC14.53□□□□□ -0.08
LMO3Q8TAP4 Metazoa_SRP.144-201ENST00000617007 311 ntBASIC14.53□□□□□ -0.08
LMO3Q8TAP4 ST5-261ENST00000626808 1071 ntTSL 5 BASIC14.53□□□□□ -0.08
LMO3Q8TAP4 SFTA2-203ENST00000634371 815 ntTSL 5 BASIC14.53□□□□□ -0.08
LMO3Q8TAP4 AMER1-202ENST00000374869 3688 ntTSL 5 BASIC14.53□□□□□ -0.08
LMO3Q8TAP4 TTC39B-201ENST00000297615 3053 ntAPPRIS ALT2 TSL 2 BASIC14.53□□□□□ -0.08
LMO3Q8TAP4 UBE2D3-210ENST00000453744 3990 ntAPPRIS ALT1 TSL 1 (best) BASIC14.53□□□□□ -0.08
LMO3Q8TAP4 NINL-203ENST00000422516 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
LMO3Q8TAP4 PTPN1-202ENST00000541713 3469 ntTSL 2 BASIC14.53□□□□□ -0.08
LMO3Q8TAP4 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
LMO3Q8TAP4 DNM1-212ENST00000627543 4734 ntAPPRIS ALT1 TSL 5 BASIC14.53□□□□□ -0.08
LMO3Q8TAP4 RASA4CP-203ENST00000446874 3193 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
LMO3Q8TAP4 ATP6V1B1-201ENST00000234396 1891 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
LMO3Q8TAP4 ADAMTS13-205ENST00000371916 4330 ntTSL 5 BASIC14.52□□□□□ -0.08
LMO3Q8TAP4 AC111188.1-201ENST00000525758 1833 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
LMO3Q8TAP4 SRL-202ENST00000537996 1814 ntTSL 2 BASIC14.52□□□□□ -0.08
LMO3Q8TAP4 SLC27A4-201ENST00000300456 3028 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
LMO3Q8TAP4 ARHGAP27-203ENST00000428638 4242 ntAPPRIS P2 TSL 5 BASIC14.52□□□□□ -0.08
LMO3Q8TAP4 AFG3L2P1-201ENST00000521792 1763 ntBASIC14.52□□□□□ -0.08
LMO3Q8TAP4 CARHSP1-216ENST00000610831 2841 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.08
LMO3Q8TAP4 AC119674.2-203ENST00000642129 1675 ntAPPRIS P5 BASIC14.52□□□□□ -0.08
LMO3Q8TAP4 SERPINA1-205ENST00000404814 1628 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
LMO3Q8TAP4 ZNF606-204ENST00000547828 2680 ntTSL 2 BASIC14.52□□□□□ -0.08
LMO3Q8TAP4 RALGPS2-204ENST00000367635 5834 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
LMO3Q8TAP4 NR4A2-209ENST00000426264 2642 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
LMO3Q8TAP4 MLX-203ENST00000435881 2428 ntAPPRIS ALT1 TSL 1 (best) BASIC14.52□□□□□ -0.08
LMO3Q8TAP4 AGAP4-203ENST00000448048 2439 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.08
LMO3Q8TAP4 TRIM26-267ENST00000453195 3318 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
LMO3Q8TAP4 DNMT3B-206ENST00000456297 2315 ntTSL 2 BASIC14.52□□□□□ -0.08
LMO3Q8TAP4 MYBPHL-201ENST00000357155 1372 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
LMO3Q8TAP4 ZBTB1-201ENST00000358738 4119 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
LMO3Q8TAP4 ANKRD18A-201ENST00000399703 4041 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
LMO3Q8TAP4 CC2D1A-208ENST00000589606 3117 ntAPPRIS ALT1 TSL 1 (best) BASIC14.52□□□□□ -0.08
LMO3Q8TAP4 PDE8A-201ENST00000310298 3984 ntAPPRIS P4 TSL 1 (best) BASIC14.52□□□□□ -0.08
LMO3Q8TAP4 TAGLN3-201ENST00000273368 1349 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
LMO3Q8TAP4 AL031432.4-201ENST00000641729 2190 ntBASIC14.52□□□□□ -0.08
LMO3Q8TAP4 PDCD5-202ENST00000379316 154 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
LMO3Q8TAP4 HTATIP2-202ENST00000421577 886 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.09
LMO3Q8TAP4 TRPM2-AS-201ENST00000423310 586 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
LMO3Q8TAP4 LINC00700-202ENST00000438372 777 ntTSL 5 BASIC14.52□□□□□ -0.09
LMO3Q8TAP4 LY6E-208ENST00000520531 490 ntTSL 2 BASIC14.52□□□□□ -0.09
LMO3Q8TAP4 DLK1-205ENST00000556051 469 ntTSL 2 BASIC14.52□□□□□ -0.09
LMO3Q8TAP4 SMIM6-201ENST00000556126 866 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.09
LMO3Q8TAP4 AL845331.2-201ENST00000561882 1044 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
LMO3Q8TAP4 ARL17B-203ENST00000570618 1140 ntTSL 2 BASIC14.52□□□□□ -0.09
LMO3Q8TAP4 LINC01996-201ENST00000573270 1273 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
LMO3Q8TAP4 PDCD5-208ENST00000592786 468 ntTSL 3 BASIC14.52□□□□□ -0.09
LMO3Q8TAP4 AC026304.1-201ENST00000597953 561 ntBASIC14.52□□□□□ -0.09
LMO3Q8TAP4 SELENOW-212ENST00000601048 888 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
LMO3Q8TAP4 COQ4-204ENST00000608951 781 ntTSL 2 BASIC14.52□□□□□ -0.09
LMO3Q8TAP4 SNX12-206ENST00000622259 661 ntTSL 5 BASIC14.52□□□□□ -0.09
LMO3Q8TAP4 AC128714.1-201ENST00000637035 887 ntBASIC14.52□□□□□ -0.09
LMO3Q8TAP4 TRIB2-201ENST00000155926 4391 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
LMO3Q8TAP4 PIK3R5-219ENST00000616147 4377 ntTSL 5 BASIC14.52□□□□□ -0.09
LMO3Q8TAP4 PLCD4-202ENST00000417849 2738 ntAPPRIS P2 TSL 5 BASIC14.52□□□□□ -0.09
LMO3Q8TAP4 RRM2B-211ENST00000621845 3483 ntTSL 2 BASIC14.52□□□□□ -0.09
LMO3Q8TAP4 GID4-201ENST00000268719 4237 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
LMO3Q8TAP4 C1R-209ENST00000542285 2660 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
LMO3Q8TAP4 COPS7B-201ENST00000350033 2544 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
LMO3Q8TAP4 AC018904.2-201ENST00000561202 1757 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
LMO3Q8TAP4 AMOTL2-212ENST00000514516 4521 ntTSL 2 BASIC14.52□□□□□ -0.09
LMO3Q8TAP4 GK-203ENST00000378943 3707 ntAPPRIS ALT1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 77.9 ms