Protein–RNA interactions for Protein: P40938

RFC3, Replication factor C subunit 3, humanhuman

Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC3P40938 KIFC3-202ENST00000421376 3128 ntTSL 2 BASIC12.62□□□□□ -0.39
RFC3P40938 GIT1-211ENST00000581348 2827 ntAPPRIS ALT2 TSL 2 BASIC12.62□□□□□ -0.39
RFC3P40938 TSPEAR-AS2-202ENST00000354333 2422 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
RFC3P40938 SERTAD2-201ENST00000313349 5549 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
RFC3P40938 PSKH1-201ENST00000291041 3481 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
RFC3P40938 NCBP2-204ENST00000427641 1946 ntTSL 2 BASIC12.62□□□□□ -0.39
RFC3P40938 DAGLB-201ENST00000297056 2897 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
RFC3P40938 ASPH-214ENST00000519234 2874 ntTSL 5 BASIC12.62□□□□□ -0.39
RFC3P40938 EXOC3-201ENST00000315013 2682 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
RFC3P40938 GORASP1-201ENST00000319283 3722 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
RFC3P40938 PASK-201ENST00000234040 4572 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
RFC3P40938 TCAM1P-207ENST00000485295 1537 ntBASIC12.62□□□□□ -0.39
RFC3P40938 CT55-201ENST00000276241 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
RFC3P40938 SLC37A3-201ENST00000326232 3349 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
RFC3P40938 RPS6KA2-204ENST00000481261 2297 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
RFC3P40938 FAM69C-202ENST00000400291 1329 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
RFC3P40938 PRAME-205ENST00000405655 2179 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
RFC3P40938 ANK1-205ENST00000347528 8237 ntAPPRIS P4 TSL 1 (best) BASIC12.62□□□□□ -0.39
RFC3P40938 SEZ6L-203ENST00000360929 6307 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
RFC3P40938 AP5Z1-201ENST00000348624 2901 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
RFC3P40938 DLG2-205ENST00000398301 2070 ntTSL 2 BASIC12.61□□□□□ -0.39
RFC3P40938 BRSK2-202ENST00000382179 3576 ntTSL 2 BASIC12.61□□□□□ -0.39
RFC3P40938 MYOM3-202ENST00000374434 5804 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
RFC3P40938 ACADM-202ENST00000370841 2619 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
RFC3P40938 GNPDA1-204ENST00000503794 2622 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
RFC3P40938 WNT7A-201ENST00000285018 4041 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
RFC3P40938 KDM2B-202ENST00000377071 4595 ntAPPRIS P4 TSL 1 (best) BASIC12.61□□□□□ -0.39
RFC3P40938 GPNMB-203ENST00000409458 1673 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
RFC3P40938 COL16A1-202ENST00000373668 3643 ntTSL 2 BASIC12.61□□□□□ -0.39
RFC3P40938 SDF2-201ENST00000247020 1568 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
RFC3P40938 AP4M1-204ENST00000421755 1572 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
RFC3P40938 PWWP2A-202ENST00000456329 3991 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
RFC3P40938 EFR3B-202ENST00000401432 5162 ntTSL 2 BASIC12.61□□□□□ -0.39
RFC3P40938 GOLGA8IP-202ENST00000611635 2100 ntBASIC12.61□□□□□ -0.39
RFC3P40938 CAMKV-209ENST00000477224 3314 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
RFC3P40938 TAPBP-234ENST00000434618 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
RFC3P40938 KRT4-204ENST00000551956 2576 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
RFC3P40938 MANBAL-201ENST00000373605 1915 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
RFC3P40938 UPK1A-203ENST00000616789 1366 ntTSL 5 BASIC12.61□□□□□ -0.39
RFC3P40938 ATG9B-203ENST00000469530 3489 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
RFC3P40938 SS18-201ENST00000269137 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC12.61□□□□□ -0.39
RFC3P40938 PDCD6IPP2-206ENST00000566178 3351 ntTSL 5 BASIC12.61□□□□□ -0.39
RFC3P40938 TNS2-202ENST00000314276 4944 ntAPPRIS P4 TSL 1 (best) BASIC12.61□□□□□ -0.39
RFC3P40938 SLC50A1-202ENST00000368401 1166 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
RFC3P40938 AK1-202ENST00000373156 757 ntAPPRIS P1 TSL 3 BASIC12.61□□□□□ -0.39
RFC3P40938 LINC01022-201ENST00000415652 394 ntTSL 3 BASIC12.61□□□□□ -0.39
RFC3P40938 AC018814.1-201ENST00000418972 357 ntTSL 3 BASIC12.61□□□□□ -0.39
RFC3P40938 FAM92A-202ENST00000423990 914 ntTSL 5 BASIC12.61□□□□□ -0.39
RFC3P40938 AC034228.2-201ENST00000432558 459 ntTSL 3 BASIC12.61□□□□□ -0.39
RFC3P40938 SPRY4-AS1-203ENST00000443800 566 ntTSL 3 BASIC12.61□□□□□ -0.39
RFC3P40938 KRT18P66-201ENST00000452970 1269 ntBASIC12.61□□□□□ -0.39
RFC3P40938 RPS23-207ENST00000511844 530 ntTSL 2 BASIC12.61□□□□□ -0.39
RFC3P40938 COQ10BP2-201ENST00000513804 724 ntBASIC12.61□□□□□ -0.39
RFC3P40938 NDRG1-209ENST00000518176 888 ntTSL 2 BASIC12.61□□□□□ -0.39
RFC3P40938 PTK2-225ENST00000520892 571 ntTSL 4 BASIC12.61□□□□□ -0.39
RFC3P40938 RAP1B-216ENST00000537460 1072 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
RFC3P40938 AC012379.2-201ENST00000560237 765 ntTSL 2 BASIC12.61□□□□□ -0.39
RFC3P40938 AC012073.1-201ENST00000606114 1108 ntBASIC12.61□□□□□ -0.39
RFC3P40938 COQ4-204ENST00000608951 781 ntTSL 2 BASIC12.61□□□□□ -0.39
RFC3P40938 AC138466.4-201ENST00000623965 852 ntBASIC12.61□□□□□ -0.39
RFC3P40938 CSAG3-203ENST00000638835 793 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
RFC3P40938 CSAG2-204ENST00000640702 793 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
RFC3P40938 ZDHHC6-201ENST00000369404 1721 ntAPPRIS ALT1 TSL 1 (best) BASIC12.61□□□□□ -0.39
RFC3P40938 EPHA5-204ENST00000511294 5176 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
RFC3P40938 RGMA-204ENST00000543599 3174 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
RFC3P40938 PTPRS-204ENST00000587303 6353 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
RFC3P40938 PGD-201ENST00000270776 1885 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
RFC3P40938 HSD17B4-201ENST00000256216 2683 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
RFC3P40938 BORCS8-202ENST00000462790 1429 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
RFC3P40938 EPM2A-218ENST00000639465 2203 ntTSL 5 BASIC12.61□□□□□ -0.39
RFC3P40938 AL731571.1-201ENST00000617058 5428 ntBASIC12.61□□□□□ -0.39
RFC3P40938 TOMM40L-209ENST00000545897 2807 ntTSL 2 BASIC12.61□□□□□ -0.39
RFC3P40938 PNMA5-205ENST00000535214 3198 ntAPPRIS P2 TSL 3 BASIC12.61□□□□□ -0.39
RFC3P40938 EMC10-201ENST00000334976 9446 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
RFC3P40938 SUOX-208ENST00000548274 2352 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
RFC3P40938 RRAGA-201ENST00000380527 1589 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
RFC3P40938 RTFDC1-203ENST00000395881 1572 ntTSL 2 BASIC12.6□□□□□ -0.39
RFC3P40938 MARVELD2-203ENST00000436532 1563 ntTSL 5 BASIC12.6□□□□□ -0.39
RFC3P40938 NME7-203ENST00000472647 1590 ntAPPRIS ALT2 TSL 2 BASIC12.6□□□□□ -0.39
RFC3P40938 PDE2A-203ENST00000418754 2855 ntTSL 2 BASIC12.6□□□□□ -0.39
RFC3P40938 ZBP1-201ENST00000371173 2195 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
RFC3P40938 RIPOR1-204ENST00000428437 4152 ntAPPRIS ALT2 TSL 2 BASIC12.6□□□□□ -0.39
RFC3P40938 TSPOAP1-201ENST00000268893 7483 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
RFC3P40938 AL359075.1-201ENST00000476232 2921 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
RFC3P40938 FUCA1P1-201ENST00000374476 1351 ntBASIC12.6□□□□□ -0.39
RFC3P40938 AC040174.1-201ENST00000563003 2571 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
RFC3P40938 IZUMO1-201ENST00000332955 1621 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
RFC3P40938 KIR2DS4-201ENST00000339924 1608 ntAPPRIS P5 TSL 1 (best) BASIC12.6□□□□□ -0.39
RFC3P40938 GFI1B-207ENST00000636137 1870 ntTSL 5 BASIC12.6□□□□□ -0.39
RFC3P40938 CEP70-201ENST00000264982 2732 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
RFC3P40938 EIF3F-201ENST00000309828 1254 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
RFC3P40938 MBD3L3-201ENST00000333843 775 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
RFC3P40938 SSR4-202ENST00000370085 526 ntTSL 2 BASIC12.6□□□□□ -0.39
RFC3P40938 RBM14-204ENST00000409738 372 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
RFC3P40938 AL022332.1-202ENST00000432495 426 ntTSL 3 BASIC12.6□□□□□ -0.39
RFC3P40938 ZMIZ1-AS1-202ENST00000440151 814 ntTSL 3 BASIC12.6□□□□□ -0.39
RFC3P40938 MIR503HG-202ENST00000440570 760 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
RFC3P40938 AC011995.2-201ENST00000452701 574 ntTSL 4 BASIC12.6□□□□□ -0.39
RFC3P40938 AC007319.1-201ENST00000453517 802 ntTSL 3 BASIC12.6□□□□□ -0.39
RFC3P40938 AC006529.1-201ENST00000459978 637 ntBASIC12.6□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 46.6 ms