Protein–RNA interactions for Protein: P18074

ERCC2, TFIIH basal transcription factor complex helicase XPD subunit, humanhuman

Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2P18074 RIC1-203ENST00000414202 6774 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
ERCC2P18074 UQCC1-204ENST00000374384 2201 ntTSL 2 BASIC14.09□□□□□ -0.15
ERCC2P18074 KIAA1614-201ENST00000367587 3309 ntTSL 2 BASIC14.08□□□□□ -0.15
ERCC2P18074 NRP2-201ENST00000272849 5909 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
ERCC2P18074 FAM155B-201ENST00000252338 4013 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
ERCC2P18074 OR2C3-201ENST00000366487 8467 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
ERCC2P18074 CPNE5-201ENST00000244751 3897 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
ERCC2P18074 LINC00943-204ENST00000537374 1688 ntTSL 5 BASIC14.08□□□□□ -0.16
ERCC2P18074 RMND5B-212ENST00000542098 1681 ntTSL 5 BASIC14.08□□□□□ -0.16
ERCC2P18074 NIPA1-207ENST00000561183 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
ERCC2P18074 UBTF-209ENST00000529383 2570 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
ERCC2P18074 CYB5A-202ENST00000340533 3283 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
ERCC2P18074 KIF6-203ENST00000394362 2394 ntTSL 5 BASIC14.08□□□□□ -0.16
ERCC2P18074 MMD2-203ENST00000406755 2372 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
ERCC2P18074 LCOR-203ENST00000371097 4852 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
ERCC2P18074 IL19-201ENST00000270218 1473 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
ERCC2P18074 IQCJ-201ENST00000397832 1460 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
ERCC2P18074 NSF-201ENST00000398238 3983 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
ERCC2P18074 HMGA2-204ENST00000403681 4473 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
ERCC2P18074 LINC01922-202ENST00000567168 1704 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
ERCC2P18074 TNS2-219ENST00000552570 4714 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
ERCC2P18074 GFAP-201ENST00000253408 3135 ntTSL 5 BASIC14.08□□□□□ -0.16
ERCC2P18074 AURKB-201ENST00000316199 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC14.08□□□□□ -0.16
ERCC2P18074 PCLAF-202ENST00000380258 911 ntTSL 2 BASIC14.08□□□□□ -0.16
ERCC2P18074 C20orf141-201ENST00000380589 730 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
ERCC2P18074 IL18BP-206ENST00000393707 1037 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
ERCC2P18074 HIST2H2BA-201ENST00000412169 381 ntBASIC14.08□□□□□ -0.16
ERCC2P18074 HPGD-203ENST00000422112 805 ntTSL 2 BASIC14.08□□□□□ -0.16
ERCC2P18074 AL359979.2-201ENST00000435108 613 ntTSL 3 BASIC14.08□□□□□ -0.16
ERCC2P18074 ASGR2-203ENST00000446679 879 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
ERCC2P18074 NOC2LP1-201ENST00000450578 752 ntBASIC14.08□□□□□ -0.16
ERCC2P18074 ESRRAP2-203ENST00000453309 822 ntTSL 5 BASIC14.08□□□□□ -0.16
ERCC2P18074 AC079250.1-201ENST00000456046 531 ntBASIC14.08□□□□□ -0.16
ERCC2P18074 RPL18AP3-201ENST00000462885 528 ntBASIC14.08□□□□□ -0.16
ERCC2P18074 LAMTOR4-209ENST00000488241 613 ntTSL 2 BASIC14.08□□□□□ -0.16
ERCC2P18074 CFL1-214ENST00000534769 758 ntTSL 2 BASIC14.08□□□□□ -0.16
ERCC2P18074 RN7SL357P-201ENST00000581065 298 ntBASIC14.08□□□□□ -0.16
ERCC2P18074 AC018755.3-203ENST00000597710 411 ntTSL 3 BASIC14.08□□□□□ -0.16
ERCC2P18074 AC140113.1-201ENST00000603467 169 ntBASIC14.08□□□□□ -0.16
ERCC2P18074 AC005041.3-201ENST00000606287 649 ntBASIC14.08□□□□□ -0.16
ERCC2P18074 ASNSD1-206ENST00000607062 968 ntTSL 5 BASIC14.08□□□□□ -0.16
ERCC2P18074 SIRT2-219ENST00000613542 1170 ntTSL 5 BASIC14.08□□□□□ -0.16
ERCC2P18074 YRDCP1-201ENST00000621419 643 ntBASIC14.08□□□□□ -0.16
ERCC2P18074 PDHB-201ENST00000302746 1527 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
ERCC2P18074 SELENBP1-208ENST00000447402 1530 ntTSL 2 BASIC14.08□□□□□ -0.16
ERCC2P18074 OSBPL5-201ENST00000263650 3889 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
ERCC2P18074 HOXA1-202ENST00000355633 2016 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
ERCC2P18074 ADD1-207ENST00000446856 3745 ntTSL 5 BASIC14.08□□□□□ -0.16
ERCC2P18074 RABEPK-201ENST00000259460 1313 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
ERCC2P18074 UQCC2-204ENST00000607484 1314 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
ERCC2P18074 AC104129.1-202ENST00000480694 4481 ntTSL 2 BASIC14.08□□□□□ -0.16
ERCC2P18074 SAMD4A-213ENST00000631086 6677 ntTSL 5 BASIC14.08□□□□□ -0.16
ERCC2P18074 SHISA5-206ENST00000426002 1839 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
ERCC2P18074 RPS6KA1-213ENST00000526792 2596 ntTSL 5 BASIC14.08□□□□□ -0.16
ERCC2P18074 CSF2RA-219ENST00000501036 1622 ntTSL 2 BASIC14.08□□□□□ -0.16
ERCC2P18074 CCND3-215ENST00000511642 2394 ntTSL 2 BASIC14.08□□□□□ -0.16
ERCC2P18074 B3GNT4-202ENST00000535274 2938 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
ERCC2P18074 ATXN7L1-207ENST00000477775 2426 ntTSL 2 BASIC14.07□□□□□ -0.16
ERCC2P18074 HFE-202ENST00000317896 1922 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
ERCC2P18074 SLC5A11-211ENST00000569071 1919 ntTSL 5 BASIC14.07□□□□□ -0.16
ERCC2P18074 NLRP7-209ENST00000592784 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
ERCC2P18074 CCDC51-206ENST00000447018 1461 ntTSL 2 BASIC14.07□□□□□ -0.16
ERCC2P18074 KIAA1217-203ENST00000376452 6052 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
ERCC2P18074 CCDC88A-201ENST00000263630 9667 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
ERCC2P18074 GFI1B-202ENST00000372122 1797 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
ERCC2P18074 GDA-203ENST00000376986 1771 ntTSL 2 BASIC14.07□□□□□ -0.16
ERCC2P18074 AMHR2-204ENST00000550311 1787 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
ERCC2P18074 ZSCAN5B-202ENST00000586855 2059 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
ERCC2P18074 PASK-201ENST00000234040 4572 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
ERCC2P18074 MAP2K6-205ENST00000589647 1512 ntTSL 5 BASIC14.07□□□□□ -0.16
ERCC2P18074 AC099521.3-201ENST00000624251 2938 ntBASIC14.07□□□□□ -0.16
ERCC2P18074 TMEM14C-201ENST00000229563 1113 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
ERCC2P18074 GON7-201ENST00000306954 1154 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
ERCC2P18074 EPPIN-201ENST00000336443 1217 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
ERCC2P18074 DLEU2-205ENST00000443587 705 ntTSL 5 BASIC14.07□□□□□ -0.16
ERCC2P18074 AL354861.1-201ENST00000445213 355 ntBASIC14.07□□□□□ -0.16
ERCC2P18074 LINC00841-201ENST00000451929 2126 ntTSL 2 BASIC14.07□□□□□ -0.16
ERCC2P18074 DPY19L2P5-201ENST00000456300 331 ntBASIC14.07□□□□□ -0.16
ERCC2P18074 AL512330.1-201ENST00000456701 349 ntTSL 3 BASIC14.07□□□□□ -0.16
ERCC2P18074 AP002803.1-201ENST00000528836 498 ntBASIC14.07□□□□□ -0.16
ERCC2P18074 TBC1D16-205ENST00000572862 1141 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
ERCC2P18074 SPINT2-204ENST00000587090 1246 ntAPPRIS ALT2 TSL 3 BASIC14.07□□□□□ -0.16
ERCC2P18074 PARD6G-AS1-205ENST00000589574 647 ntTSL 3 BASIC14.07□□□□□ -0.16
ERCC2P18074 AL031665.1-201ENST00000619766 572 ntTSL 4 BASIC14.07□□□□□ -0.16
ERCC2P18074 PSMD5-208ENST00000625444 219 ntTSL 5 BASIC14.07□□□□□ -0.16
ERCC2P18074 NAPEPLD-201ENST00000341533 4972 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
ERCC2P18074 STK26-202ENST00000394334 3288 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
ERCC2P18074 KIR3DL1-203ENST00000391728 1871 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
ERCC2P18074 PTPN6-202ENST00000399448 2159 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
ERCC2P18074 FGD4-203ENST00000472289 1629 ntTSL 2 BASIC14.07□□□□□ -0.16
ERCC2P18074 NFKB2-204ENST00000428099 3416 ntAPPRIS ALT1 TSL 1 (best) BASIC14.07□□□□□ -0.16
ERCC2P18074 MYLK-201ENST00000346322 5892 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
ERCC2P18074 ANKZF1-201ENST00000323348 2579 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
ERCC2P18074 ALG8-202ENST00000376156 1677 ntTSL 2 BASIC14.07□□□□□ -0.16
ERCC2P18074 CSPG4P12-202ENST00000559989 7790 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
ERCC2P18074 MICAL1-202ENST00000358807 3645 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
ERCC2P18074 FAM213A-205ENST00000606162 5859 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
ERCC2P18074 KCNIP2-203ENST00000348850 2089 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
ERCC2P18074 AC115284.2-201ENST00000624646 2054 ntBASIC14.06□□□□□ -0.16
ERCC2P18074 DCHS1-201ENST00000299441 10765 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 34.7 ms