Protein–RNA interactions for Protein: Q9P035

HACD3, Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase 3, humanhuman

Predictions only

Length 362 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HACD3Q9P035 ALPL-206ENST00000539907 2241 ntTSL 2 BASIC13.95□□□□□ -0.18
HACD3Q9P035 KIRREL2-203ENST00000360202 2942 ntAPPRIS P4 TSL 1 (best) BASIC13.95□□□□□ -0.18
HACD3Q9P035 HTR3E-203ENST00000425359 1326 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
HACD3Q9P035 DLG1-AS1-202ENST00000430666 1694 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
HACD3Q9P035 PCDHB5-201ENST00000231134 3408 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
HACD3Q9P035 CALB1-201ENST00000265431 2533 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
HACD3Q9P035 ADCY8-202ENST00000377928 3363 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
HACD3Q9P035 PTPRH-202ENST00000376350 3877 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
HACD3Q9P035 FAM230C-201ENST00000623511 1970 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
HACD3Q9P035 SPAG8-209ENST00000484764 1618 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
HACD3Q9P035 SFI1-208ENST00000432498 4162 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
HACD3Q9P035 CPLX2-201ENST00000359546 5023 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
HACD3Q9P035 LAIR2-201ENST00000301202 699 ntAPPRIS P4 TSL 1 (best) BASIC13.95□□□□□ -0.18
HACD3Q9P035 OR9I1-201ENST00000302610 945 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
HACD3Q9P035 AL138767.1-201ENST00000354527 744 ntTSL 3 BASIC13.95□□□□□ -0.18
HACD3Q9P035 C6orf136-202ENST00000376471 614 ntTSL 3 BASIC13.95□□□□□ -0.18
HACD3Q9P035 RPS9-204ENST00000391753 709 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
HACD3Q9P035 AL627231.1-201ENST00000394467 1125 ntBASIC13.95□□□□□ -0.18
HACD3Q9P035 ZSCAN32-204ENST00000422427 1267 ntTSL 2 BASIC13.95□□□□□ -0.18
HACD3Q9P035 GRPEL2P1-201ENST00000453145 339 ntBASIC13.95□□□□□ -0.18
HACD3Q9P035 LINC01563-201ENST00000456235 750 ntTSL 2 BASIC13.95□□□□□ -0.18
HACD3Q9P035 RN7SL769P-201ENST00000469386 295 ntBASIC13.95□□□□□ -0.18
HACD3Q9P035 RN7SL81P-201ENST00000493781 261 ntBASIC13.95□□□□□ -0.18
HACD3Q9P035 AC112487.1-201ENST00000498032 1097 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
HACD3Q9P035 IGLV3-15-201ENST00000518356 244 ntBASIC13.95□□□□□ -0.18
HACD3Q9P035 AC138230.1-201ENST00000525893 664 ntTSL 5 BASIC13.95□□□□□ -0.18
HACD3Q9P035 AP001160.1-201ENST00000535817 565 ntTSL 3 BASIC13.95□□□□□ -0.18
HACD3Q9P035 LINC02369-202ENST00000540745 801 ntTSL 5 BASIC13.95□□□□□ -0.18
HACD3Q9P035 OS9-220ENST00000552285 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
HACD3Q9P035 C12orf73-210ENST00000552940 685 ntTSL 2 BASIC13.95□□□□□ -0.18
HACD3Q9P035 MAN2C1-216ENST00000563622 2961 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
HACD3Q9P035 MIR4326-201ENST00000582203 59 ntBASIC13.95□□□□□ -0.18
HACD3Q9P035 FBXL12-212ENST00000592067 879 ntTSL 2 BASIC13.95□□□□□ -0.18
HACD3Q9P035 NUMA1-234ENST00000620566 7012 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
HACD3Q9P035 ACO1-203ENST00000541043 3618 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
HACD3Q9P035 UBE2V1-224ENST00000625172 2297 ntTSL 4 BASIC13.95□□□□□ -0.18
HACD3Q9P035 LINC00863-201ENST00000439559 3287 ntTSL 5 BASIC13.95□□□□□ -0.18
HACD3Q9P035 PIGC-201ENST00000344529 1447 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
HACD3Q9P035 MEIKIN-205ENST00000616644 1438 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
HACD3Q9P035 TFEB-205ENST00000394283 2595 ntTSL 2 BASIC13.95□□□□□ -0.18
HACD3Q9P035 ACTR3-201ENST00000263238 6718 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
HACD3Q9P035 TRAF3IP3-204ENST00000367026 2058 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
HACD3Q9P035 SFSWAP-210ENST00000541286 3219 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
HACD3Q9P035 CPNE5-201ENST00000244751 3897 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
HACD3Q9P035 XKRX-202ENST00000468904 2249 ntTSL 2 BASIC13.95□□□□□ -0.18
HACD3Q9P035 GOLGA8IP-201ENST00000340249 1899 ntTSL 2 BASIC13.95□□□□□ -0.18
HACD3Q9P035 RDH12-203ENST00000551171 1879 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
HACD3Q9P035 HSPA1L-201ENST00000375654 2544 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
HACD3Q9P035 LPCAT1-201ENST00000283415 3966 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
HACD3Q9P035 SMIM12-206ENST00000521580 3454 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
HACD3Q9P035 CDC20B-202ENST00000322374 1679 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
HACD3Q9P035 MGRN1-211ENST00000588994 1665 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
HACD3Q9P035 HNF1A-201ENST00000257555 3442 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
HACD3Q9P035 STRA6-203ENST00000416286 2750 ntTSL 5 BASIC13.94□□□□□ -0.18
HACD3Q9P035 MRPL17-201ENST00000288937 1969 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
HACD3Q9P035 STK25-235ENST00000543554 2556 ntTSL 2 BASIC13.94□□□□□ -0.18
HACD3Q9P035 UBXN11-207ENST00000374223 1312 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
HACD3Q9P035 VAMP2-202ENST00000404970 1479 ntTSL 2 BASIC13.94□□□□□ -0.18
HACD3Q9P035 ZNF493-208ENST00000599461 1769 ntBASIC13.94□□□□□ -0.18
HACD3Q9P035 HPSE2-206ENST00000628193 1760 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
HACD3Q9P035 RNH1-224ENST00000534797 2973 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
HACD3Q9P035 PDE7B-203ENST00000615259 5234 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
HACD3Q9P035 ABCA3-202ENST00000382381 6446 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
HACD3Q9P035 COMMD4-201ENST00000267935 1067 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
HACD3Q9P035 COMMD4-202ENST00000338995 722 ntTSL 2 BASIC13.94□□□□□ -0.18
HACD3Q9P035 SEC13-202ENST00000350697 1425 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
HACD3Q9P035 RANGRF-202ENST00000407006 1074 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
HACD3Q9P035 AL137058.1-201ENST00000418237 673 ntTSL 5 BASIC13.94□□□□□ -0.18
HACD3Q9P035 AC092573.1-201ENST00000433054 884 ntBASIC13.94□□□□□ -0.18
HACD3Q9P035 ERP29P1-201ENST00000442902 706 ntBASIC13.94□□□□□ -0.18
HACD3Q9P035 DCST1-AS1-201ENST00000452962 822 ntTSL 2 BASIC13.94□□□□□ -0.18
HACD3Q9P035 AL355803.1-201ENST00000455524 188 ntTSL 2 BASIC13.94□□□□□ -0.18
HACD3Q9P035 UPF3AP2-201ENST00000457924 1132 ntBASIC13.94□□□□□ -0.18
HACD3Q9P035 NAA40-205ENST00000539656 577 ntTSL 4 BASIC13.94□□□□□ -0.18
HACD3Q9P035 PRAME-214ENST00000543184 2758 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
HACD3Q9P035 AC025154.2-201ENST00000550530 445 ntTSL 3 BASIC13.94□□□□□ -0.18
HACD3Q9P035 LGALS3-204ENST00000554715 916 ntTSL 3 BASIC13.94□□□□□ -0.18
HACD3Q9P035 COMMD4-211ENST00000564815 639 ntTSL 3 BASIC13.94□□□□□ -0.18
HACD3Q9P035 FAM104A-206ENST00000583024 417 ntTSL 3 BASIC13.94□□□□□ -0.18
HACD3Q9P035 AC010422.5-201ENST00000597961 585 ntAPPRIS P1 TSL 4 BASIC13.94□□□□□ -0.18
HACD3Q9P035 AL049840.2-201ENST00000602722 535 ntBASIC13.94□□□□□ -0.18
HACD3Q9P035 AL356417.2-202ENST00000608986 532 ntTSL 3 BASIC13.94□□□□□ -0.18
HACD3Q9P035 HNRNPDL-207ENST00000614627 3968 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
HACD3Q9P035 AC007718.1-201ENST00000621078 280 ntBASIC13.94□□□□□ -0.18
HACD3Q9P035 AC051619.9-201ENST00000623237 597 ntBASIC13.94□□□□□ -0.18
HACD3Q9P035 GPRASP1-202ENST00000415986 5877 ntAPPRIS P1 TSL 4 BASIC13.94□□□□□ -0.18
HACD3Q9P035 GRIN1-204ENST00000371553 3751 ntAPPRIS P4 TSL 1 (best) BASIC13.94□□□□□ -0.18
HACD3Q9P035 TOLLIP-202ENST00000317204 3617 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
HACD3Q9P035 PSKH1-201ENST00000291041 3481 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
HACD3Q9P035 MINDY1-205ENST00000493834 1546 ntTSL 2 BASIC13.94□□□□□ -0.18
HACD3Q9P035 ZSCAN2-202ENST00000327179 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC13.94□□□□□ -0.18
HACD3Q9P035 ZC2HC1A-201ENST00000263849 3352 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
HACD3Q9P035 ZMYM3-207ENST00000373998 6067 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
HACD3Q9P035 SERPINI1-201ENST00000295777 1907 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
HACD3Q9P035 EPHX1-202ENST00000366837 1780 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
HACD3Q9P035 CLCN7-203ENST00000448525 4151 ntTSL 2 BASIC13.93□□□□□ -0.18
HACD3Q9P035 MAGED4B-211ENST00000497164 2482 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
HACD3Q9P035 DRD3-202ENST00000383673 1640 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
HACD3Q9P035 ALDOA-204ENST00000412304 1603 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
HACD3Q9P035 GPR4-201ENST00000323040 3048 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 50.4 ms