Protein–RNA interactions for Protein: Q5THJ4

VPS13D, Vacuolar protein sorting-associated protein 13D, humanhuman

Predictions only

Length 4,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13DQ5THJ4 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC8.75□□□□□ -1.01
VPS13DQ5THJ4 ACVR1C-202ENST00000335450 1501 ntTSL 1 (best) BASIC8.74□□□□□ -1.01
VPS13DQ5THJ4 PMP22-203ENST00000395938 1817 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
VPS13DQ5THJ4 ZNF568-201ENST00000333987 2441 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
VPS13DQ5THJ4 VPS26A-203ENST00000395098 2554 ntTSL 5 BASIC8.74□□□□□ -1.01
VPS13DQ5THJ4 OSBP2-219ENST00000535268 3248 ntTSL 2 BASIC8.74□□□□□ -1.01
VPS13DQ5THJ4 TFG-202ENST00000418917 1716 ntAPPRIS ALT1 TSL 3 BASIC8.74□□□□□ -1.01
VPS13DQ5THJ4 GLB1L-201ENST00000295759 2745 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
VPS13DQ5THJ4 HAMP-201ENST00000222304 558 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
VPS13DQ5THJ4 AKTIP-201ENST00000300245 2133 ntAPPRIS ALT1 TSL 5 BASIC8.74□□□□□ -1.01
VPS13DQ5THJ4 REG1B-201ENST00000305089 767 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
VPS13DQ5THJ4 TXNRD3NB-201ENST00000404489 738 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
VPS13DQ5THJ4 RPSAP46-201ENST00000428316 882 ntBASIC8.74□□□□□ -1.01
VPS13DQ5THJ4 AKR1C6P-201ENST00000432950 983 ntBASIC8.74□□□□□ -1.01
VPS13DQ5THJ4 TCP10L-202ENST00000472557 732 ntAPPRIS ALT2 TSL 2 BASIC8.74□□□□□ -1.01
VPS13DQ5THJ4 AC027290.1-201ENST00000537827 484 ntTSL 5 BASIC8.74□□□□□ -1.01
VPS13DQ5THJ4 MPI-212ENST00000565576 1148 ntTSL 2 BASIC8.74□□□□□ -1.01
VPS13DQ5THJ4 AC008750.5-201ENST00000595500 473 ntTSL 2 BASIC8.74□□□□□ -1.01
VPS13DQ5THJ4 MIR1914-201ENST00000607800 80 ntBASIC8.74□□□□□ -1.01
VPS13DQ5THJ4 LINC01988-202ENST00000636975 921 ntTSL 5 BASIC8.74□□□□□ -1.01
VPS13DQ5THJ4 MED12L-203ENST00000422248 2757 ntAPPRIS ALT2 TSL 2 BASIC8.74□□□□□ -1.01
VPS13DQ5THJ4 TELO2-201ENST00000262319 3314 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
VPS13DQ5THJ4 ZNF674-AS1-201ENST00000421685 2078 ntTSL 1 (best) BASIC8.74□□□□□ -1.01
VPS13DQ5THJ4 TBC1D3E-201ENST00000621587 2076 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
VPS13DQ5THJ4 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
VPS13DQ5THJ4 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
VPS13DQ5THJ4 RNF150-201ENST00000306799 4535 ntTSL 1 (best) BASIC8.74□□□□□ -1.01
VPS13DQ5THJ4 KRT36-201ENST00000328119 1644 ntAPPRIS P1 TSL 2 BASIC8.74□□□□□ -1.01
VPS13DQ5THJ4 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC8.74□□□□□ -1.01
VPS13DQ5THJ4 TBC1D3L-201ENST00000612727 2148 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
VPS13DQ5THJ4 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC8.74□□□□□ -1.01
VPS13DQ5THJ4 PRKCSH-212ENST00000591462 2209 ntAPPRIS ALT2 TSL 5 BASIC8.74□□□□□ -1.01
VPS13DQ5THJ4 ABCG1-205ENST00000398449 2998 ntAPPRIS ALT1 TSL 1 (best) BASIC8.74□□□□□ -1.01
VPS13DQ5THJ4 PXN-221ENST00000637617 3246 ntAPPRIS ALT2 TSL 5 BASIC8.74□□□□□ -1.01
VPS13DQ5THJ4 PPIL2-202ENST00000398831 2574 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
VPS13DQ5THJ4 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
VPS13DQ5THJ4 LMO1-201ENST00000335790 1279 ntAPPRIS P3 TSL 1 (best) BASIC8.74□□□□□ -1.01
VPS13DQ5THJ4 LMO1-204ENST00000534484 770 ntAPPRIS ALT1 TSL 5 BASIC8.74□□□□□ -1.01
VPS13DQ5THJ4 AC025257.1-201ENST00000550926 375 ntTSL 3 BASIC8.74□□□□□ -1.01
VPS13DQ5THJ4 AC008894.2-202ENST00000599676 1027 ntTSL 3 BASIC8.74□□□□□ -1.01
VPS13DQ5THJ4 GSDMB-201ENST00000309481 1500 ntAPPRIS ALT2 TSL 2 BASIC8.74□□□□□ -1.01
VPS13DQ5THJ4 NPL-205ENST00000367555 1536 ntTSL 1 (best) BASIC8.74□□□□□ -1.01
VPS13DQ5THJ4 ZC3HAV1-204ENST00000471652 3182 ntTSL 1 (best) BASIC8.74□□□□□ -1.01
VPS13DQ5THJ4 AC239799.1-201ENST00000612520 3411 ntAPPRIS P1 TSL 5 BASIC8.74□□□□□ -1.01
VPS13DQ5THJ4 TRNAU1AP-201ENST00000373830 1799 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
VPS13DQ5THJ4 C1QTNF3-201ENST00000231338 1959 ntAPPRIS P3 TSL 1 (best) BASIC8.74□□□□□ -1.01
VPS13DQ5THJ4 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
VPS13DQ5THJ4 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
VPS13DQ5THJ4 GHRL-201ENST00000287656 1313 ntAPPRIS ALT1 TSL 1 (best) BASIC8.74□□□□□ -1.01
VPS13DQ5THJ4 HDAC11-201ENST00000295757 2960 ntAPPRIS P3 TSL 1 (best) BASIC8.74□□□□□ -1.01
VPS13DQ5THJ4 TCAF2-201ENST00000357344 2958 ntTSL 1 (best) BASIC8.74□□□□□ -1.01
VPS13DQ5THJ4 TMEM192-203ENST00000506087 2225 ntTSL 2 BASIC8.74□□□□□ -1.01
VPS13DQ5THJ4 TRPV6-201ENST00000359396 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC8.74□□□□□ -1.01
VPS13DQ5THJ4 SFTPA2-202ENST00000372327 815 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
VPS13DQ5THJ4 MRPL36-201ENST00000382647 587 ntAPPRIS P1 TSL 3 BASIC8.74□□□□□ -1.01
VPS13DQ5THJ4 HNRNPA1P19-201ENST00000405292 370 ntBASIC8.74□□□□□ -1.01
VPS13DQ5THJ4 GALM-202ENST00000410063 1023 ntTSL 3 BASIC8.74□□□□□ -1.01
VPS13DQ5THJ4 PIN1P1-202ENST00000439639 301 ntBASIC8.74□□□□□ -1.01
VPS13DQ5THJ4 ORMDL2-204ENST00000550836 438 ntTSL 3 BASIC8.74□□□□□ -1.01
VPS13DQ5THJ4 AL355075.5-201ENST00000553568 890 ntBASIC8.74□□□□□ -1.01
VPS13DQ5THJ4 AL356805.1-201ENST00000556383 341 ntTSL 3 BASIC8.74□□□□□ -1.01
VPS13DQ5THJ4 AC098934.1-201ENST00000443294 1835 ntTSL 1 (best) BASIC8.74□□□□□ -1.01
VPS13DQ5THJ4 SPRY2-201ENST00000377102 2708 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
VPS13DQ5THJ4 GJB1-202ENST00000374022 1904 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
VPS13DQ5THJ4 CENPK-215ENST00000514814 1697 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
VPS13DQ5THJ4 CYP20A1-210ENST00000613925 1986 ntTSL 2 BASIC8.74□□□□□ -1.01
VPS13DQ5THJ4 LINC01763-201ENST00000425185 1547 ntTSL 3 BASIC8.73□□□□□ -1.01
VPS13DQ5THJ4 AC004471.2-201ENST00000609936 1514 ntTSL 3 BASIC8.73□□□□□ -1.01
VPS13DQ5THJ4 AC005549.1-201ENST00000579438 1629 ntBASIC8.73□□□□□ -1.01
VPS13DQ5THJ4 KIFC3-207ENST00000543930 3018 ntTSL 2 BASIC8.73□□□□□ -1.01
VPS13DQ5THJ4 OS9-203ENST00000389142 2457 ntTSL 5 BASIC8.73□□□□□ -1.01
VPS13DQ5THJ4 MYL1-202ENST00000352451 1065 ntTSL 1 (best) BASIC8.73□□□□□ -1.01
VPS13DQ5THJ4 LCN12-202ENST00000371633 579 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
VPS13DQ5THJ4 HSD17B3-201ENST00000375262 984 ntTSL 1 (best) BASIC8.73□□□□□ -1.01
VPS13DQ5THJ4 MIR602-201ENST00000384960 98 ntBASIC8.73□□□□□ -1.01
VPS13DQ5THJ4 B9D1-204ENST00000395616 733 ntTSL 3 BASIC8.73□□□□□ -1.01
VPS13DQ5THJ4 ATP6AP2-202ENST00000423649 1093 ntAPPRIS ALT2 TSL 2 BASIC8.73□□□□□ -1.01
VPS13DQ5THJ4 WSB1-203ENST00000427287 1149 ntTSL 2 BASIC8.73□□□□□ -1.01
VPS13DQ5THJ4 C2orf27AP2-201ENST00000438438 555 ntBASIC8.73□□□□□ -1.01
VPS13DQ5THJ4 RN7SL16P-201ENST00000476316 269 ntBASIC8.73□□□□□ -1.01
VPS13DQ5THJ4 MT1G-204ENST00000569500 305 ntTSL 3 BASIC8.73□□□□□ -1.01
VPS13DQ5THJ4 ELP5-210ENST00000573657 687 ntTSL 1 (best) BASIC8.73□□□□□ -1.01
VPS13DQ5THJ4 WSB1-213ENST00000583193 552 ntTSL 4 BASIC8.73□□□□□ -1.01
VPS13DQ5THJ4 AC011495.2-201ENST00000600665 360 ntTSL 5 BASIC8.73□□□□□ -1.01
VPS13DQ5THJ4 MRPL34-206ENST00000602206 603 ntTSL 3 BASIC8.73□□□□□ -1.01
VPS13DQ5THJ4 LINC00888-202ENST00000471496 1490 ntTSL 3 BASIC8.73□□□□□ -1.01
VPS13DQ5THJ4 LAT2-205ENST00000460943 2527 ntAPPRIS P2 TSL 1 (best) BASIC8.73□□□□□ -1.01
VPS13DQ5THJ4 GIT1-211ENST00000581348 2827 ntAPPRIS ALT2 TSL 2 BASIC8.73□□□□□ -1.01
VPS13DQ5THJ4 AC004951.1-201ENST00000447643 1866 ntTSL 2 BASIC8.73□□□□□ -1.01
VPS13DQ5THJ4 TARS2-205ENST00000438568 2188 ntTSL 1 (best) BASIC8.73□□□□□ -1.01
VPS13DQ5THJ4 RTP2-201ENST00000358241 1346 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
VPS13DQ5THJ4 AC099689.1-201ENST00000624383 1302 ntBASIC8.73□□□□□ -1.01
VPS13DQ5THJ4 GPHN-202ENST00000459628 1723 ntTSL 2 BASIC8.73□□□□□ -1.01
VPS13DQ5THJ4 FHOD3-207ENST00000591635 3035 ntTSL 5 BASIC8.73□□□□□ -1.01
VPS13DQ5THJ4 AP3M2-207ENST00000518421 3669 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
VPS13DQ5THJ4 LIN9-201ENST00000328205 3567 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
VPS13DQ5THJ4 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC8.73□□□□□ -1.01
VPS13DQ5THJ4 ZNF606-204ENST00000547828 2680 ntTSL 2 BASIC8.73□□□□□ -1.01
VPS13DQ5THJ4 TRGV4-201ENST00000390345 688 ntAPPRIS P1 BASIC8.73□□□□□ -1.01
VPS13DQ5THJ4 ART2P-201ENST00000415521 822 ntBASIC8.73□□□□□ -1.01
Retrieved 100 of 98,524 protein–RNA pairs in 103.3 ms