Protein–RNA interactions for Protein: P56747

CLDN6, Claudin-6, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN6P56747 PYM1-203ENST00000408946 1226 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
CLDN6P56747 AL513165.1-201ENST00000413915 289 ntTSL 3 BASIC13.14□□□□□ -0.31
CLDN6P56747 SNHG14-201ENST00000414175 610 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
CLDN6P56747 AL591242.1-201ENST00000422284 343 ntTSL 2 BASIC13.14□□□□□ -0.31
CLDN6P56747 SNRPCP15-201ENST00000424055 192 ntBASIC13.14□□□□□ -0.31
CLDN6P56747 KCNK15-AS1-203ENST00000427598 862 ntTSL 2 BASIC13.14□□□□□ -0.31
CLDN6P56747 CCND3P1-201ENST00000438347 580 ntBASIC13.14□□□□□ -0.31
CLDN6P56747 AC079250.1-201ENST00000456046 531 ntBASIC13.14□□□□□ -0.31
CLDN6P56747 AC098820.2-201ENST00000457694 666 ntTSL 5 BASIC13.14□□□□□ -0.31
CLDN6P56747 TPT1P11-201ENST00000458482 498 ntBASIC13.14□□□□□ -0.31
CLDN6P56747 AC007679.1-201ENST00000458609 502 ntBASIC13.14□□□□□ -0.31
CLDN6P56747 RN7SL684P-201ENST00000465665 294 ntBASIC13.14□□□□□ -0.31
CLDN6P56747 C5orf63-203ENST00000509733 553 ntTSL 4 BASIC13.14□□□□□ -0.31
CLDN6P56747 AC122694.1-201ENST00000510987 563 ntTSL 4 BASIC13.14□□□□□ -0.31
CLDN6P56747 CTBP2P6-201ENST00000526402 1229 ntBASIC13.14□□□□□ -0.31
CLDN6P56747 BLOC1S1-203ENST00000548925 571 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CLDN6P56747 MYMX-201ENST00000573382 817 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
CLDN6P56747 SRRM2-AS1-204ENST00000573802 818 ntTSL 2 BASIC13.14□□□□□ -0.31
CLDN6P56747 ZNF671-203ENST00000596939 977 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
CLDN6P56747 AC005609.5-201ENST00000624712 1053 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
CLDN6P56747 GARS-210ENST00000627489 324 ntTSL 4 BASIC13.14□□□□□ -0.31
CLDN6P56747 EPM2A-218ENST00000639465 2203 ntTSL 5 BASIC13.14□□□□□ -0.31
CLDN6P56747 MAGIX-208ENST00000616266 3295 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
CLDN6P56747 PPM1M-201ENST00000296487 2429 ntTSL 2 BASIC13.14□□□□□ -0.31
CLDN6P56747 CHIT1-201ENST00000255427 1598 ntTSL 2 BASIC13.14□□□□□ -0.31
CLDN6P56747 AC008620.2-201ENST00000510294 1569 ntBASIC13.14□□□□□ -0.31
CLDN6P56747 IRAK4-212ENST00000551736 1684 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CLDN6P56747 LRRC41-201ENST00000343304 2947 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CLDN6P56747 LHX6-207ENST00000541397 2942 ntTSL 2 BASIC13.14□□□□□ -0.31
CLDN6P56747 MYADM-205ENST00000391771 3111 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
CLDN6P56747 FCRL6-201ENST00000321935 1997 ntAPPRIS ALT2 TSL 2 BASIC13.14□□□□□ -0.31
CLDN6P56747 NFIC-206ENST00000589123 8068 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
CLDN6P56747 EFHB-202ENST00000344838 2389 ntAPPRIS ALT2 TSL 2 BASIC13.14□□□□□ -0.31
CLDN6P56747 MSI1-201ENST00000257552 2975 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CLDN6P56747 EML4-203ENST00000402711 3568 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
CLDN6P56747 NEK10-206ENST00000429845 4250 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
CLDN6P56747 BIN3-205ENST00000519513 1431 ntTSL 2 BASIC13.13□□□□□ -0.31
CLDN6P56747 GFI1B-203ENST00000372123 1514 ntTSL 5 BASIC13.13□□□□□ -0.31
CLDN6P56747 DNAJB6-204ENST00000429029 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CLDN6P56747 OS9-220ENST00000552285 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
CLDN6P56747 TNIP1-214ENST00000522226 2238 ntAPPRIS P3 TSL 2 BASIC13.13□□□□□ -0.31
CLDN6P56747 CLEC18B-204ENST00000617101 2321 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
CLDN6P56747 ZC3H4-201ENST00000253048 6119 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
CLDN6P56747 CSPG4P12-202ENST00000559989 7790 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
CLDN6P56747 RBFADN-204ENST00000568911 5187 ntTSL 2 BASIC13.13□□□□□ -0.31
CLDN6P56747 CBFA2T3-201ENST00000268679 4477 ntAPPRIS P4 TSL 1 (best) BASIC13.13□□□□□ -0.31
CLDN6P56747 ZNF365-207ENST00000410046 3379 ntTSL 2 BASIC13.13□□□□□ -0.31
CLDN6P56747 SMOC2-201ENST00000354536 3150 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
CLDN6P56747 CCDC187-203ENST00000569961 3158 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
CLDN6P56747 MAN1B1-202ENST00000371589 2769 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CLDN6P56747 COQ7-209ENST00000569127 2575 ntTSL 2 BASIC13.13□□□□□ -0.31
CLDN6P56747 AC104452.1-203ENST00000636166 2266 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
CLDN6P56747 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
CLDN6P56747 AL031056.1-202ENST00000635954 2193 ntTSL 5 BASIC13.13□□□□□ -0.31
CLDN6P56747 GCFC2-211ENST00000541687 4318 ntTSL 2 BASIC13.13□□□□□ -0.31
CLDN6P56747 BCL9L-201ENST00000334801 10005 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CLDN6P56747 SIGLEC6-204ENST00000391797 1391 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
CLDN6P56747 ZWINT-202ENST00000361148 807 ntAPPRIS ALT2 TSL 2 BASIC13.13□□□□□ -0.31
CLDN6P56747 MANEA-202ENST00000369293 1076 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
CLDN6P56747 MRPL55-219ENST00000391867 685 ntAPPRIS P1 TSL 3 BASIC13.13□□□□□ -0.31
CLDN6P56747 SNU13-204ENST00000402458 462 ntTSL 3 BASIC13.13□□□□□ -0.31
CLDN6P56747 PHBP10-201ENST00000416467 784 ntBASIC13.13□□□□□ -0.31
CLDN6P56747 CDKN2A-AS1-201ENST00000441769 823 ntBASIC13.13□□□□□ -0.31
CLDN6P56747 PRR34-AS1-203ENST00000451166 877 ntTSL 3 BASIC13.13□□□□□ -0.31
CLDN6P56747 IGKV1OR-2-201ENST00000457995 350 ntBASIC13.13□□□□□ -0.31
CLDN6P56747 SNRPD2P2-201ENST00000473818 333 ntBASIC13.13□□□□□ -0.31
CLDN6P56747 GLUD1P3-201ENST00000507952 896 ntTSL 2 BASIC13.13□□□□□ -0.31
CLDN6P56747 AC233724.9-201ENST00000511694 407 ntBASIC13.13□□□□□ -0.31
CLDN6P56747 SMAD1-AS1-201ENST00000513542 481 ntTSL 2 BASIC13.13□□□□□ -0.31
CLDN6P56747 RNA5SP420-201ENST00000516997 137 ntBASIC13.13□□□□□ -0.31
CLDN6P56747 AC019294.2-203ENST00000569596 594 ntTSL 3 BASIC13.13□□□□□ -0.31
CLDN6P56747 AC090617.4-201ENST00000572404 422 ntTSL 3 BASIC13.13□□□□□ -0.31
CLDN6P56747 AC087741.1-205ENST00000572730 750 ntTSL 3 BASIC13.13□□□□□ -0.31
CLDN6P56747 ZNF235-203ENST00000589248 532 ntTSL 3 BASIC13.13□□□□□ -0.31
CLDN6P56747 FXYD3-206ENST00000603524 742 ntTSL 3 BASIC13.13□□□□□ -0.31
CLDN6P56747 FXYD3-211ENST00000604804 564 ntTSL 4 BASIC13.13□□□□□ -0.31
CLDN6P56747 CBR3-AS1-206ENST00000608632 659 ntTSL 5 BASIC13.13□□□□□ -0.31
CLDN6P56747 AC020922.4-201ENST00000621389 339 ntBASIC13.13□□□□□ -0.31
CLDN6P56747 HIST1H3B-201ENST00000621411 411 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
CLDN6P56747 FCGR3A-208ENST00000638849 873 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
CLDN6P56747 B3GNT7-201ENST00000287590 3706 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CLDN6P56747 RCAN2-203ENST00000371374 3327 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
CLDN6P56747 UMODL1-206ENST00000408989 5262 ntAPPRIS P4 TSL 1 (best) BASIC13.13□□□□□ -0.31
CLDN6P56747 CICP16-201ENST00000502609 2813 ntBASIC13.13□□□□□ -0.31
CLDN6P56747 NFATC4-219ENST00000555167 4364 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
CLDN6P56747 KCNJ11-204ENST00000528731 2146 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
CLDN6P56747 GABPA-202ENST00000400075 4814 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CLDN6P56747 UBXN11-206ENST00000374222 2043 ntAPPRIS P4 TSL 5 BASIC13.13□□□□□ -0.31
CLDN6P56747 MCRS1-211ENST00000550165 1936 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
CLDN6P56747 ANXA9-201ENST00000368947 1826 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CLDN6P56747 DDX20-201ENST00000369702 4212 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CLDN6P56747 AC041040.2-201ENST00000622926 2899 ntBASIC13.13□□□□□ -0.31
CLDN6P56747 NAALADL1-204ENST00000358658 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CLDN6P56747 B3GAT1-203ENST00000524765 5737 ntAPPRIS P1 TSL 2 BASIC13.13□□□□□ -0.31
CLDN6P56747 GAD2-201ENST00000259271 2462 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CLDN6P56747 DENND1B-211ENST00000620048 8378 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
CLDN6P56747 ANKMY1-204ENST00000391987 3221 ntTSL 5 BASIC13.13□□□□□ -0.31
CLDN6P56747 GPR37-201ENST00000303921 3021 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CLDN6P56747 RADIL-201ENST00000399583 3689 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
CLDN6P56747 ABLIM2-215ENST00000545242 1972 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 73.9 ms