Protein–RNA interactions for Protein: Q8NHG7

SVIP, Small VCP/p97-interacting protein, humanhuman

Predictions only

Length 77 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SVIPQ8NHG7 ST6GALNAC5-202ENST00000477717 3751 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
SVIPQ8NHG7 CYP2C18-202ENST00000339022 1471 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
SVIPQ8NHG7 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC8.06□□□□□ -1.12
SVIPQ8NHG7 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC8.06□□□□□ -1.12
SVIPQ8NHG7 KCNMA1-246ENST00000638848 4423 ntAPPRIS ALT2 TSL 5 BASIC8.06□□□□□ -1.12
SVIPQ8NHG7 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
SVIPQ8NHG7 GFM2-203ENST00000427854 1870 ntTSL 2 BASIC8.06□□□□□ -1.12
SVIPQ8NHG7 DCAF8-201ENST00000326837 3972 ntAPPRIS P1 TSL 5 BASIC8.06□□□□□ -1.12
SVIPQ8NHG7 KIAA0319-202ENST00000430948 6620 ntAPPRIS ALT2 TSL 2 BASIC8.06□□□□□ -1.12
SVIPQ8NHG7 ICK-202ENST00000356971 6227 ntAPPRIS P1 TSL 2 BASIC8.06□□□□□ -1.12
SVIPQ8NHG7 ZNF233-201ENST00000391958 2784 ntAPPRIS P1 TSL 2 BASIC8.06□□□□□ -1.12
SVIPQ8NHG7 LINC00347-202ENST00000594461 2371 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
SVIPQ8NHG7 AC136428.3-201ENST00000566387 1990 ntBASIC8.06□□□□□ -1.12
SVIPQ8NHG7 ADAM10-201ENST00000260408 11431 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
SVIPQ8NHG7 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
SVIPQ8NHG7 TGOLN2-201ENST00000282120 6419 ntAPPRIS ALT2 TSL 5 BASIC8.06□□□□□ -1.12
SVIPQ8NHG7 WDPCP-204ENST00000409199 2466 ntTSL 2 BASIC8.06□□□□□ -1.12
SVIPQ8NHG7 CRNKL1-207ENST00000536226 4009 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
SVIPQ8NHG7 ERMAP-202ENST00000372514 3369 ntAPPRIS P2 TSL 1 (best) BASIC8.06□□□□□ -1.12
SVIPQ8NHG7 TRAPPC9-202ENST00000438773 4297 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
SVIPQ8NHG7 KRT8P50-201ENST00000562022 1438 ntBASIC8.06□□□□□ -1.12
SVIPQ8NHG7 DCLK1-202ENST00000360631 8007 ntAPPRIS ALT2 TSL 5 BASIC8.06□□□□□ -1.12
SVIPQ8NHG7 CTBP2-203ENST00000337195 6939 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
SVIPQ8NHG7 PACSIN1-202ENST00000374043 4229 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
SVIPQ8NHG7 SLC6A4-203ENST00000401766 6543 ntAPPRIS P1 TSL 5 BASIC8.06□□□□□ -1.12
SVIPQ8NHG7 TMEM75-201ENST00000624314 2165 ntBASIC8.06□□□□□ -1.12
SVIPQ8NHG7 RFPL4AL1-201ENST00000341750 908 ntAPPRIS P1 TSL 5 BASIC8.06□□□□□ -1.12
SVIPQ8NHG7 C1orf162-201ENST00000343534 1107 ntAPPRIS P3 TSL 1 (best) BASIC8.06□□□□□ -1.12
SVIPQ8NHG7 SRSF10-205ENST00000374452 1194 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
SVIPQ8NHG7 ART2P-201ENST00000415521 822 ntBASIC8.06□□□□□ -1.12
SVIPQ8NHG7 DEFB122-201ENST00000433453 499 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
SVIPQ8NHG7 RFPL4A-201ENST00000434937 1035 ntAPPRIS P1 TSL 5 BASIC8.06□□□□□ -1.12
SVIPQ8NHG7 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
SVIPQ8NHG7 LINC00337-202ENST00000441724 1138 ntTSL 3 BASIC8.06□□□□□ -1.12
SVIPQ8NHG7 AC068759.1-201ENST00000447709 470 ntTSL 5 BASIC8.06□□□□□ -1.12
SVIPQ8NHG7 FCF1P7-201ENST00000451185 558 ntBASIC8.06□□□□□ -1.12
SVIPQ8NHG7 AL132671.2-201ENST00000467125 930 ntAPPRIS P1 TSL 2 BASIC8.06□□□□□ -1.12
SVIPQ8NHG7 MGAT4D-201ENST00000503109 1281 ntAPPRIS ALT2 TSL 5 BASIC8.06□□□□□ -1.12
SVIPQ8NHG7 AC112184.1-201ENST00000505179 312 ntBASIC8.06□□□□□ -1.12
SVIPQ8NHG7 MGAT4D-203ENST00000511113 1125 ntAPPRIS P2 TSL 5 BASIC8.06□□□□□ -1.12
SVIPQ8NHG7 AC025857.1-201ENST00000525252 377 ntBASIC8.06□□□□□ -1.12
SVIPQ8NHG7 AF111167.1-201ENST00000555909 704 ntTSL 3 BASIC8.06□□□□□ -1.12
SVIPQ8NHG7 AC006557.4-201ENST00000585516 830 ntBASIC8.06□□□□□ -1.12
SVIPQ8NHG7 AC087468.1-201ENST00000604365 630 ntBASIC8.06□□□□□ -1.12
SVIPQ8NHG7 RN7SL536P-201ENST00000612366 290 ntBASIC8.06□□□□□ -1.12
SVIPQ8NHG7 RN7SL545P-201ENST00000620547 290 ntBASIC8.06□□□□□ -1.12
SVIPQ8NHG7 RN7SL759P-201ENST00000620768 290 ntBASIC8.06□□□□□ -1.12
SVIPQ8NHG7 OR4K14-202ENST00000641793 1245 ntAPPRIS P1 BASIC8.06□□□□□ -1.12
SVIPQ8NHG7 GOLGA8EP-202ENST00000620011 5241 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
SVIPQ8NHG7 PDP2-201ENST00000311765 7146 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
SVIPQ8NHG7 VPS54-203ENST00000409558 4337 ntAPPRIS ALT1 TSL 1 (best) BASIC8.06□□□□□ -1.12
SVIPQ8NHG7 SEC16B-204ENST00000464631 2948 ntAPPRIS ALT2 TSL 1 (best) BASIC8.06□□□□□ -1.12
SVIPQ8NHG7 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
SVIPQ8NHG7 INTS7-202ENST00000366993 3422 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
SVIPQ8NHG7 ACOT9-202ENST00000379295 2768 ntTSL 2 BASIC8.06□□□□□ -1.12
SVIPQ8NHG7 FCRL3-202ENST00000368186 2633 ntAPPRIS ALT2 TSL 1 (best) BASIC8.06□□□□□ -1.12
SVIPQ8NHG7 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
SVIPQ8NHG7 CHODL-206ENST00000400135 2136 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
SVIPQ8NHG7 ZFP57-203ENST00000488757 1870 ntAPPRIS P2 TSL 1 (best) BASIC8.06□□□□□ -1.12
SVIPQ8NHG7 AC007342.9-201ENST00000623877 1385 ntBASIC8.06□□□□□ -1.12
SVIPQ8NHG7 MYH16-203ENST00000439784 5836 ntBASIC8.06□□□□□ -1.12
SVIPQ8NHG7 FGB-201ENST00000302068 1975 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
SVIPQ8NHG7 NRG1-203ENST00000405005 1992 ntAPPRIS ALT2 TSL 1 (best) BASIC8.06□□□□□ -1.12
SVIPQ8NHG7 ZNF859P-201ENST00000502859 1966 ntBASIC8.06□□□□□ -1.12
SVIPQ8NHG7 PIK3CG-202ENST00000440650 3828 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
SVIPQ8NHG7 CTNNA2-214ENST00000496558 3839 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
SVIPQ8NHG7 ENTPD3-204ENST00000456402 1749 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
SVIPQ8NHG7 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
SVIPQ8NHG7 SCAF8-202ENST00000367186 4908 ntTSL 2 BASIC8.06□□□□□ -1.12
SVIPQ8NHG7 GPBAR1-203ENST00000521462 1465 ntAPPRIS P1 TSL 2 BASIC8.06□□□□□ -1.12
SVIPQ8NHG7 PABPC1-219ENST00000522387 2331 ntTSL 2 BASIC8.06□□□□□ -1.12
SVIPQ8NHG7 MYO5A-202ENST00000358212 12220 ntAPPRIS ALT2 TSL 5 BASIC8.06□□□□□ -1.12
SVIPQ8NHG7 MYO5A-205ENST00000399231 12225 ntAPPRIS P3 TSL 1 (best) BASIC8.06□□□□□ -1.12
SVIPQ8NHG7 MYO5A-206ENST00000399233 12220 ntAPPRIS ALT2 TSL 5 BASIC8.06□□□□□ -1.12
SVIPQ8NHG7 TCOF1-205ENST00000439160 4644 ntAPPRIS ALT2 TSL 5 BASIC8.06□□□□□ -1.12
SVIPQ8NHG7 C9orf153-201ENST00000339137 1845 ntAPPRIS P2 TSL 2 BASIC8.06□□□□□ -1.12
SVIPQ8NHG7 ARMCX5-GPRASP2-206ENST00000476910 1848 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
SVIPQ8NHG7 AF228730.7-203ENST00000641436 1804 ntBASIC8.06□□□□□ -1.12
SVIPQ8NHG7 DDIAS-207ENST00000528759 3278 ntTSL 2 BASIC8.05□□□□□ -1.12
SVIPQ8NHG7 ATP8A2-204ENST00000381655 9575 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
SVIPQ8NHG7 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
SVIPQ8NHG7 LCT-201ENST00000264162 6279 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
SVIPQ8NHG7 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC8.05□□□□□ -1.12
SVIPQ8NHG7 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
SVIPQ8NHG7 DNAJC5G-202ENST00000402462 1904 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
SVIPQ8NHG7 NELL2-217ENST00000551601 3148 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
SVIPQ8NHG7 LAMC2-204ENST00000493293 4313 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
SVIPQ8NHG7 PGPEP1-202ENST00000269919 7092 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
SVIPQ8NHG7 SALL1-202ENST00000440970 5253 ntTSL 5 BASIC8.05□□□□□ -1.12
SVIPQ8NHG7 AC010886.1-201ENST00000437380 2869 ntBASIC8.05□□□□□ -1.12
SVIPQ8NHG7 XBP1-204ENST00000405219 1690 ntTSL 2 BASIC8.05□□□□□ -1.12
SVIPQ8NHG7 AC134508.1-201ENST00000570082 2977 ntBASIC8.05□□□□□ -1.12
SVIPQ8NHG7 PIGR-201ENST00000356495 4279 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
SVIPQ8NHG7 ITGAL-203ENST00000433423 1416 ntTSL 2 BASIC8.05□□□□□ -1.12
SVIPQ8NHG7 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC8.05□□□□□ -1.12
SVIPQ8NHG7 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
SVIPQ8NHG7 ARSG-201ENST00000448504 4642 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
SVIPQ8NHG7 ATP1A1-201ENST00000295598 3654 ntAPPRIS P3 TSL 1 (best) BASIC8.05□□□□□ -1.12
SVIPQ8NHG7 NCAPD3-214ENST00000534548 5061 ntAPPRIS P2 TSL 1 (best) BASIC8.05□□□□□ -1.12
SVIPQ8NHG7 AMOT-202ENST00000371958 2462 ntAPPRIS ALT2 TSL 5 BASIC8.05□□□□□ -1.12
Retrieved 100 of 98,524 protein–RNA pairs in 93.3 ms