Protein–RNA interactions for Protein: Q9Y2P8

RCL1, RNA 3'-terminal phosphate cyclase-like protein, humanhuman

Known RBP Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCL1Q9Y2P8 RERG-201ENST00000256953 2264 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
RCL1Q9Y2P8 ORMDL2-201ENST00000243045 2141 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
RCL1Q9Y2P8 AP001258.1-201ENST00000501817 2110 ntTSL 5 BASIC11.3□□□□□ -0.6
RCL1Q9Y2P8 CD22-209ENST00000594250 2107 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
RCL1Q9Y2P8 INHBC-201ENST00000309668 1992 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
RCL1Q9Y2P8 DBF4B-202ENST00000393547 1810 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
RCL1Q9Y2P8 PPP1R11-204ENST00000376769 1689 ntTSL 2 BASIC11.3□□□□□ -0.6
RCL1Q9Y2P8 SPACA6P-AS-201ENST00000602324 3962 ntTSL 2 BASIC11.3□□□□□ -0.6
RCL1Q9Y2P8 CD38-201ENST00000226279 5668 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
RCL1Q9Y2P8 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
RCL1Q9Y2P8 KIZ-208ENST00000616848 1875 ntAPPRIS ALT2 TSL 2 BASIC11.3□□□□□ -0.6
RCL1Q9Y2P8 RHOH-222ENST00000617441 1872 ntAPPRIS P1 TSL 2 BASIC11.3□□□□□ -0.6
RCL1Q9Y2P8 TRHDE-AS1-202ENST00000435350 2966 ntTSL 2 BASIC11.3□□□□□ -0.6
RCL1Q9Y2P8 CACNA2D2-205ENST00000429770 5304 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
RCL1Q9Y2P8 MRPL44-201ENST00000258383 1748 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
RCL1Q9Y2P8 YPEL4-201ENST00000300022 1721 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
RCL1Q9Y2P8 PDE1B-203ENST00000538346 1711 ntTSL 2 BASIC11.3□□□□□ -0.6
RCL1Q9Y2P8 DQX1-202ENST00000404568 2689 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
RCL1Q9Y2P8 CXCR5-201ENST00000292174 4431 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
RCL1Q9Y2P8 MMD2-203ENST00000406755 2372 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
RCL1Q9Y2P8 DUT-208ENST00000559540 1441 ntTSL 2 BASIC11.3□□□□□ -0.6
RCL1Q9Y2P8 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
RCL1Q9Y2P8 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
RCL1Q9Y2P8 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC11.3□□□□□ -0.6
RCL1Q9Y2P8 LAMA4-203ENST00000368638 1061 ntTSL 2 BASIC11.3□□□□□ -0.6
RCL1Q9Y2P8 FAM27C-201ENST00000377542 616 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
RCL1Q9Y2P8 NUDT2-203ENST00000379158 1075 ntAPPRIS P1 TSL 3 BASIC11.3□□□□□ -0.6
RCL1Q9Y2P8 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC11.3□□□□□ -0.6
RCL1Q9Y2P8 GPR17-202ENST00000393018 1177 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
RCL1Q9Y2P8 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC11.3□□□□□ -0.6
RCL1Q9Y2P8 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC11.3□□□□□ -0.6
RCL1Q9Y2P8 EIF4HP1-201ENST00000453115 687 ntBASIC11.3□□□□□ -0.6
RCL1Q9Y2P8 LAMA4-209ENST00000453937 645 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
RCL1Q9Y2P8 HOXB-AS3-206ENST00000474040 741 ntTSL 3 BASIC11.3□□□□□ -0.6
RCL1Q9Y2P8 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
RCL1Q9Y2P8 RNA5SP486-201ENST00000515961 83 ntBASIC11.3□□□□□ -0.6
RCL1Q9Y2P8 PTP4A1P2-201ENST00000546033 454 ntBASIC11.3□□□□□ -0.6
RCL1Q9Y2P8 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC11.3□□□□□ -0.6
RCL1Q9Y2P8 MAP1LC3B2-202ENST00000556529 660 ntAPPRIS P1 TSL 3 BASIC11.3□□□□□ -0.6
RCL1Q9Y2P8 FBXL12-202ENST00000585379 956 ntTSL 2 BASIC11.3□□□□□ -0.6
RCL1Q9Y2P8 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC11.3□□□□□ -0.6
RCL1Q9Y2P8 AL358472.5-202ENST00000641448 1267 ntBASIC11.3□□□□□ -0.6
RCL1Q9Y2P8 MISP-201ENST00000215582 2871 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
RCL1Q9Y2P8 ZC3H18-202ENST00000452588 3211 ntTSL 2 BASIC11.3□□□□□ -0.6
RCL1Q9Y2P8 NDRG2-201ENST00000298684 1784 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
RCL1Q9Y2P8 LINC00846-201ENST00000334165 1778 ntTSL 2 BASIC11.3□□□□□ -0.6
RCL1Q9Y2P8 AMT-256ENST00000638063 1783 ntTSL 5 BASIC11.3□□□□□ -0.6
RCL1Q9Y2P8 MAP7-208ENST00000617204 4536 ntAPPRIS ALT2 TSL 2 BASIC11.3□□□□□ -0.6
RCL1Q9Y2P8 EFR3B-205ENST00000405108 2432 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
RCL1Q9Y2P8 CTAGE13P-201ENST00000416709 2446 ntBASIC11.3□□□□□ -0.6
RCL1Q9Y2P8 SEPT10-202ENST00000397712 3071 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
RCL1Q9Y2P8 SPHK2-208ENST00000599029 3085 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
RCL1Q9Y2P8 ARRDC5-201ENST00000381781 1638 ntAPPRIS P1 TSL 3 BASIC11.3□□□□□ -0.6
RCL1Q9Y2P8 CBR4-202ENST00000504480 1602 ntTSL 2 BASIC11.3□□□□□ -0.6
RCL1Q9Y2P8 UBA3-201ENST00000349511 2112 ntAPPRIS ALT1 TSL 2 BASIC11.3□□□□□ -0.6
RCL1Q9Y2P8 A1CF-204ENST00000373997 2116 ntAPPRIS ALT1 TSL 1 (best) BASIC11.3□□□□□ -0.6
RCL1Q9Y2P8 IL19-201ENST00000270218 1473 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
RCL1Q9Y2P8 RAB8B-201ENST00000321437 4943 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
RCL1Q9Y2P8 KLF4-206ENST00000610832 1956 ntTSL 5 BASIC11.3□□□□□ -0.6
RCL1Q9Y2P8 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC11.3□□□□□ -0.6
RCL1Q9Y2P8 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC11.3□□□□□ -0.6
RCL1Q9Y2P8 ADRA1A-210ENST00000519229 1838 ntTSL 5 BASIC11.3□□□□□ -0.6
RCL1Q9Y2P8 ATXN2L-203ENST00000340394 3807 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
RCL1Q9Y2P8 ZNF773-205ENST00000599847 5832 ntTSL 2 BASIC11.3□□□□□ -0.6
RCL1Q9Y2P8 AKAP8-201ENST00000269701 3670 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
RCL1Q9Y2P8 ZSCAN32-203ENST00000396852 3169 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
RCL1Q9Y2P8 GABRR2-201ENST00000402938 1682 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
RCL1Q9Y2P8 CMIP-208ENST00000566462 3512 ntTSL 4 BASIC11.3□□□□□ -0.6
RCL1Q9Y2P8 FAM86C1-201ENST00000346333 2010 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
RCL1Q9Y2P8 ZNF106-205ENST00000565611 5081 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
RCL1Q9Y2P8 SPAAR-203ENST00000636776 1538 ntAPPRIS P1 BASIC11.3□□□□□ -0.6
RCL1Q9Y2P8 LPO-204ENST00000543544 2350 ntTSL 2 BASIC11.3□□□□□ -0.6
RCL1Q9Y2P8 PRUNE1-205ENST00000368937 1850 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
RCL1Q9Y2P8 GPR161-209ENST00000539777 7655 ntTSL 2 BASIC11.29□□□□□ -0.6
RCL1Q9Y2P8 TMEM56-201ENST00000370203 6822 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
RCL1Q9Y2P8 DPP3-211ENST00000532677 3078 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
RCL1Q9Y2P8 AL033529.1-201ENST00000480336 3447 ntAPPRIS P1 TSL 2 BASIC11.29□□□□□ -0.6
RCL1Q9Y2P8 AC020763.3-201ENST00000625095 2904 ntBASIC11.29□□□□□ -0.6
RCL1Q9Y2P8 SLC6A19-201ENST00000304460 5174 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
RCL1Q9Y2P8 AC000068.1-201ENST00000431090 2097 ntTSL 2 BASIC11.29□□□□□ -0.6
RCL1Q9Y2P8 AC091181.1-201ENST00000623762 2098 ntBASIC11.29□□□□□ -0.6
RCL1Q9Y2P8 KIF9-207ENST00000444589 2791 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
RCL1Q9Y2P8 NAPB-201ENST00000377026 3837 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
RCL1Q9Y2P8 PSMC4-201ENST00000157812 1591 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
RCL1Q9Y2P8 RECQL5-218ENST00000584999 1922 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
RCL1Q9Y2P8 AL357673.2-201ENST00000623663 4969 ntTSL 5 BASIC11.29□□□□□ -0.6
RCL1Q9Y2P8 ACER1-201ENST00000301452 1445 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
RCL1Q9Y2P8 E2F3P2-201ENST00000447755 1422 ntBASIC11.29□□□□□ -0.6
RCL1Q9Y2P8 MIR762HG-203ENST00000570025 1429 ntTSL 2 BASIC11.29□□□□□ -0.6
RCL1Q9Y2P8 DDAH1-201ENST00000284031 3920 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
RCL1Q9Y2P8 DNAH10OS-201ENST00000514254 5040 ntAPPRIS P1 TSL 2 BASIC11.29□□□□□ -0.6
RCL1Q9Y2P8 CSTF2-201ENST00000372972 1958 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
RCL1Q9Y2P8 SEC24B-202ENST00000399100 3780 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
RCL1Q9Y2P8 NBN-201ENST00000265433 4666 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
RCL1Q9Y2P8 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
RCL1Q9Y2P8 SNX21-203ENST00000372541 771 ntTSL 2 BASIC11.29□□□□□ -0.6
RCL1Q9Y2P8 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
RCL1Q9Y2P8 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
RCL1Q9Y2P8 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
RCL1Q9Y2P8 MPV17-205ENST00000402310 906 ntTSL 5 BASIC11.29□□□□□ -0.6
Retrieved 100 of 98,524 protein–RNA pairs in 51.3 ms