Protein–RNA interactions for Protein: Q5VT25

CDC42BPA, Serine/threonine-protein kinase MRCK alpha, humanhuman

Predictions only

Length 1,732 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPAQ5VT25 GOLGA8A-201ENST00000359187 1877 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
CDC42BPAQ5VT25 ADAM17-203ENST00000497134 1873 ntTSL 5 BASIC19.91■□□□□ 0.78
CDC42BPAQ5VT25 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CDC42BPAQ5VT25 NR4A1-202ENST00000360284 2589 ntTSL 2 BASIC19.91■□□□□ 0.78
CDC42BPAQ5VT25 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC19.91■□□□□ 0.78
CDC42BPAQ5VT25 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC19.91■□□□□ 0.78
CDC42BPAQ5VT25 MRPS28-201ENST00000276585 850 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CDC42BPAQ5VT25 CD33-202ENST00000391796 1089 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
CDC42BPAQ5VT25 THYN1-203ENST00000392594 943 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CDC42BPAQ5VT25 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
CDC42BPAQ5VT25 HIST1H2BN-201ENST00000396980 432 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
CDC42BPAQ5VT25 AC013436.1-201ENST00000425077 422 ntTSL 3 BASIC19.91■□□□□ 0.78
CDC42BPAQ5VT25 P2RX6P-202ENST00000450626 357 ntBASIC19.91■□□□□ 0.78
CDC42BPAQ5VT25 ORMDL2-204ENST00000550836 438 ntTSL 3 BASIC19.91■□□□□ 0.78
CDC42BPAQ5VT25 AC034102.3-201ENST00000551846 300 ntTSL 3 BASIC19.91■□□□□ 0.78
CDC42BPAQ5VT25 U62317.4-201ENST00000609758 448 ntBASIC19.91■□□□□ 0.78
CDC42BPAQ5VT25 LINC00963-217ENST00000624009 663 ntTSL 5 BASIC19.91■□□□□ 0.78
CDC42BPAQ5VT25 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC19.91■□□□□ 0.78
CDC42BPAQ5VT25 C3orf36-201ENST00000408895 1668 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
CDC42BPAQ5VT25 CAMKV-215ENST00000488336 2905 ntTSL 2 BASIC19.91■□□□□ 0.78
CDC42BPAQ5VT25 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CDC42BPAQ5VT25 YAP1P1-201ENST00000401504 1393 ntBASIC19.91■□□□□ 0.78
CDC42BPAQ5VT25 AL355390.1-201ENST00000325811 2328 ntTSL 2 BASIC19.91■□□□□ 0.78
CDC42BPAQ5VT25 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CDC42BPAQ5VT25 NBEAP3-201ENST00000420638 1493 ntBASIC19.91■□□□□ 0.78
CDC42BPAQ5VT25 NDEL1-203ENST00000402554 1858 ntTSL 5 BASIC19.91■□□□□ 0.78
CDC42BPAQ5VT25 TFG-202ENST00000418917 1716 ntAPPRIS ALT1 TSL 3 BASIC19.91■□□□□ 0.78
CDC42BPAQ5VT25 ZFYVE27-202ENST00000357540 2765 ntTSL 2 BASIC19.91■□□□□ 0.78
CDC42BPAQ5VT25 ZFYVE27-204ENST00000370610 2769 ntTSL 2 BASIC19.91■□□□□ 0.78
CDC42BPAQ5VT25 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CDC42BPAQ5VT25 MMD2-203ENST00000406755 2372 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CDC42BPAQ5VT25 FCHSD1-209ENST00000522783 2477 ntTSL 5 BASIC19.91■□□□□ 0.78
CDC42BPAQ5VT25 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CDC42BPAQ5VT25 CXorf40B-203ENST00000370406 1653 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
CDC42BPAQ5VT25 GABRR2-201ENST00000402938 1682 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CDC42BPAQ5VT25 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CDC42BPAQ5VT25 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CDC42BPAQ5VT25 AC053503.4-201ENST00000431827 224 ntTSL 5 BASIC19.9■□□□□ 0.78
CDC42BPAQ5VT25 AC108112.1-201ENST00000505567 659 ntTSL 5 BASIC19.9■□□□□ 0.78
CDC42BPAQ5VT25 SPTY2D1-AS1-202ENST00000511927 573 ntAPPRIS ALT2 TSL 4 BASIC19.9■□□□□ 0.78
CDC42BPAQ5VT25 IGHV3-6-201ENST00000518407 347 ntBASIC19.9■□□□□ 0.78
CDC42BPAQ5VT25 OSGIN1-206ENST00000565123 833 ntTSL 2 BASIC19.9■□□□□ 0.78
CDC42BPAQ5VT25 MIR22HG-206ENST00000573127 899 ntTSL 3 BASIC19.9■□□□□ 0.78
CDC42BPAQ5VT25 CR936218.2-201ENST00000574252 759 ntTSL 3 BASIC19.9■□□□□ 0.78
CDC42BPAQ5VT25 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CDC42BPAQ5VT25 FHL2-208ENST00000409807 1601 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CDC42BPAQ5VT25 AL138762.1-201ENST00000608554 1637 ntBASIC19.9■□□□□ 0.78
CDC42BPAQ5VT25 FGR-204ENST00000399173 2483 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
CDC42BPAQ5VT25 EXO5-201ENST00000296380 2217 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
CDC42BPAQ5VT25 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
CDC42BPAQ5VT25 RPUSD4-208ENST00000533628 2053 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CDC42BPAQ5VT25 HDGF-203ENST00000368209 2171 ntTSL 2 BASIC19.9■□□□□ 0.78
CDC42BPAQ5VT25 AP002414.2-201ENST00000591780 3365 ntBASIC19.9■□□□□ 0.78
CDC42BPAQ5VT25 ASPH-214ENST00000519234 2874 ntTSL 5 BASIC19.9■□□□□ 0.78
CDC42BPAQ5VT25 CREB5-203ENST00000396299 2294 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CDC42BPAQ5VT25 FP671120.1-201ENST00000623664 2498 ntTSL 2 BASIC19.9■□□□□ 0.78
CDC42BPAQ5VT25 FP236383.1-201ENST00000623860 2498 ntTSL 2 BASIC19.9■□□□□ 0.78
CDC42BPAQ5VT25 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CDC42BPAQ5VT25 NXF1-201ENST00000294172 2346 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CDC42BPAQ5VT25 TPM3P7-201ENST00000338274 732 ntBASIC19.9■□□□□ 0.78
CDC42BPAQ5VT25 SPINK4-201ENST00000379721 402 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CDC42BPAQ5VT25 KRTAP10-10-201ENST00000380095 1100 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
CDC42BPAQ5VT25 AC098934.2-202ENST00000438944 1033 ntBASIC19.9■□□□□ 0.78
CDC42BPAQ5VT25 AC079340.2-201ENST00000504957 495 ntTSL 2 BASIC19.9■□□□□ 0.78
CDC42BPAQ5VT25 AC092435.2-201ENST00000515530 524 ntTSL 4 BASIC19.9■□□□□ 0.78
CDC42BPAQ5VT25 WISP1-205ENST00000519433 545 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CDC42BPAQ5VT25 AP001979.2-201ENST00000526254 975 ntTSL 5 BASIC19.9■□□□□ 0.78
CDC42BPAQ5VT25 AC025419.1-201ENST00000537250 690 ntTSL 3 BASIC19.9■□□□□ 0.78
CDC42BPAQ5VT25 AC079601.2-201ENST00000547729 775 ntBASIC19.9■□□□□ 0.78
CDC42BPAQ5VT25 ZG16B-204ENST00000572863 716 ntAPPRIS ALT2 TSL 2 BASIC19.9■□□□□ 0.78
CDC42BPAQ5VT25 AC099552.4-201ENST00000624248 949 ntBASIC19.9■□□□□ 0.78
CDC42BPAQ5VT25 GOLGA2-212ENST00000609374 2973 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CDC42BPAQ5VT25 SEC13-203ENST00000383801 1479 ntTSL 2 BASIC19.9■□□□□ 0.78
CDC42BPAQ5VT25 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CDC42BPAQ5VT25 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CDC42BPAQ5VT25 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CDC42BPAQ5VT25 ANKS1B-208ENST00000547010 2595 ntTSL 1 (best) BASIC19.89■□□□□ 0.78
CDC42BPAQ5VT25 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.78
CDC42BPAQ5VT25 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
CDC42BPAQ5VT25 ALOX15P2-201ENST00000340858 1897 ntBASIC19.89■□□□□ 0.78
CDC42BPAQ5VT25 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
CDC42BPAQ5VT25 ALX1-201ENST00000316824 1445 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
CDC42BPAQ5VT25 NUTM2E-201ENST00000429984 3292 ntAPPRIS P5 TSL 5 BASIC19.89■□□□□ 0.77
CDC42BPAQ5VT25 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
CDC42BPAQ5VT25 PHBP3-201ENST00000412562 819 ntBASIC19.89■□□□□ 0.77
CDC42BPAQ5VT25 AL078621.2-201ENST00000419351 698 ntBASIC19.89■□□□□ 0.77
CDC42BPAQ5VT25 ATP6AP2-202ENST00000423649 1093 ntAPPRIS ALT2 TSL 2 BASIC19.89■□□□□ 0.77
CDC42BPAQ5VT25 AC069421.1-201ENST00000447462 323 ntBASIC19.89■□□□□ 0.77
CDC42BPAQ5VT25 AL355987.2-201ENST00000471502 561 ntTSL 4 BASIC19.89■□□□□ 0.77
CDC42BPAQ5VT25 ASS1P9-201ENST00000513426 1236 ntBASIC19.89■□□□□ 0.77
CDC42BPAQ5VT25 DDIAS-204ENST00000525388 961 ntAPPRIS ALT2 TSL 2 BASIC19.89■□□□□ 0.77
CDC42BPAQ5VT25 MAF1-204ENST00000532522 1098 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
CDC42BPAQ5VT25 ATP2A2-211ENST00000552636 529 ntTSL 4 BASIC19.89■□□□□ 0.77
CDC42BPAQ5VT25 AC090825.2-201ENST00000557959 739 ntBASIC19.89■□□□□ 0.77
CDC42BPAQ5VT25 AC021321.1-201ENST00000607397 1113 ntBASIC19.89■□□□□ 0.77
CDC42BPAQ5VT25 TGM5-207ENST00000622115 2202 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
CDC42BPAQ5VT25 MAP2K7-203ENST00000397983 3396 ntAPPRIS ALT1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CDC42BPAQ5VT25 KLHDC2-211ENST00000557247 1565 ntTSL 5 BASIC19.89■□□□□ 0.77
CDC42BPAQ5VT25 KIR3DL3-201ENST00000291860 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CDC42BPAQ5VT25 ZCCHC18-206ENST00000611638 2941 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 55.3 ms