Protein–RNA interactions for Protein: P55056

APOC4, Apolipoprotein C-IV, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC4P55056 AP005264.6-204ENST00000588436 719 ntBASIC10.1□□□□□ -0.79
APOC4P55056 MIA-206ENST00000597784 455 ntAPPRIS P1 TSL 3 BASIC10.1□□□□□ -0.79
APOC4P55056 MIR8071-1-201ENST00000616769 65 ntBASIC10.1□□□□□ -0.79
APOC4P55056 MIR8071-2-201ENST00000616772 65 ntBASIC10.1□□□□□ -0.79
APOC4P55056 AL451007.2-201ENST00000632004 563 ntBASIC10.1□□□□□ -0.79
APOC4P55056 AL137793.2-201ENST00000632635 659 ntTSL 3 BASIC10.1□□□□□ -0.79
APOC4P55056 NAXD-201ENST00000309957 2659 ntAPPRIS P1 TSL 2 BASIC10.1□□□□□ -0.79
APOC4P55056 APBB1-203ENST00000389906 2684 ntAPPRIS ALT1 TSL 5 BASIC10.1□□□□□ -0.79
APOC4P55056 KIAA1683-209ENST00000612316 2684 ntAPPRIS ALT2 TSL 5 BASIC10.1□□□□□ -0.79
APOC4P55056 PPP1R32-201ENST00000338608 1535 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
APOC4P55056 EMILIN1-201ENST00000380320 3943 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
APOC4P55056 CEP131-202ENST00000374782 3505 ntAPPRIS P3 TSL 5 BASIC10.1□□□□□ -0.79
APOC4P55056 SLC35F1-201ENST00000360388 4852 ntAPPRIS P2 TSL 1 (best) BASIC10.1□□□□□ -0.79
APOC4P55056 DCAF10-202ENST00000377724 3862 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
APOC4P55056 AL353608.3-202ENST00000429953 4384 ntTSL 5 BASIC10.1□□□□□ -0.79
APOC4P55056 FAM90A21P-201ENST00000510875 1396 ntBASIC10.1□□□□□ -0.79
APOC4P55056 FAM90A15P-201ENST00000514465 1395 ntBASIC10.1□□□□□ -0.79
APOC4P55056 FAM90A6P-201ENST00000515148 1394 ntBASIC10.1□□□□□ -0.79
APOC4P55056 FAM90A16P-201ENST00000526662 1395 ntBASIC10.1□□□□□ -0.79
APOC4P55056 FAM90A9P-201ENST00000527940 1395 ntBASIC10.1□□□□□ -0.79
APOC4P55056 FAM90A5P-201ENST00000528738 1395 ntBASIC10.1□□□□□ -0.79
APOC4P55056 FAM90A14P-201ENST00000530386 1395 ntBASIC10.1□□□□□ -0.79
APOC4P55056 FAM90A13P-201ENST00000534703 1395 ntBASIC10.1□□□□□ -0.79
APOC4P55056 SLC7A8-214ENST00000621729 1371 ntTSL 5 BASIC10.1□□□□□ -0.79
APOC4P55056 AP002851.1-201ENST00000640504 2130 ntTSL 5 BASIC10.1□□□□□ -0.79
APOC4P55056 ELN-203ENST00000320492 2991 ntAPPRIS ALT2 TSL 2 BASIC10.1□□□□□ -0.79
APOC4P55056 PIGV-202ENST00000374145 2713 ntAPPRIS P1 TSL 2 BASIC10.1□□□□□ -0.79
APOC4P55056 TNFAIP8L1-201ENST00000327473 3814 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
APOC4P55056 TNFAIP8L1-202ENST00000536716 3845 ntAPPRIS P1 TSL 2 BASIC10.1□□□□□ -0.79
APOC4P55056 PTBP1-221ENST00000635647 3691 ntTSL 5 BASIC10.1□□□□□ -0.79
APOC4P55056 LMCD1-201ENST00000157600 8405 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
APOC4P55056 AL357054.3-201ENST00000607084 2055 ntTSL 5 BASIC10.1□□□□□ -0.79
APOC4P55056 AC020763.3-201ENST00000625095 2904 ntBASIC10.1□□□□□ -0.79
APOC4P55056 SPIN3-201ENST00000374919 4642 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
APOC4P55056 IL1RN-201ENST00000259206 1810 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
APOC4P55056 DBNDD1-203ENST00000392973 2689 ntTSL 2 BASIC10.1□□□□□ -0.79
APOC4P55056 CCNB2-201ENST00000288207 1556 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
APOC4P55056 AP4M1-204ENST00000421755 1572 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
APOC4P55056 WDR66-201ENST00000288912 4467 ntAPPRIS P3 TSL 1 (best) BASIC10.09□□□□□ -0.79
APOC4P55056 DDX20-201ENST00000369702 4212 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
APOC4P55056 KIF6-201ENST00000229913 1330 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
APOC4P55056 TNFRSF1A-202ENST00000366159 1339 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
APOC4P55056 PAX5-214ENST00000523241 1342 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
APOC4P55056 GUCY2EP-203ENST00000531117 1918 ntBASIC10.09□□□□□ -0.79
APOC4P55056 SLC35C2-203ENST00000372227 2505 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
APOC4P55056 AL928654.5-201ENST00000624831 2501 ntBASIC10.09□□□□□ -0.79
APOC4P55056 ZDHHC8-203ENST00000405930 3112 ntTSL 2 BASIC10.09□□□□□ -0.79
APOC4P55056 SYTL3-205ENST00000611299 2896 ntAPPRIS ALT1 TSL 5 BASIC10.09□□□□□ -0.79
APOC4P55056 UBN1-202ENST00000396658 6336 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
APOC4P55056 DGCR5-203ENST00000438934 5492 ntTSL 5 BASIC10.09□□□□□ -0.79
APOC4P55056 AKNA-202ENST00000307564 7380 ntAPPRIS P2 TSL 1 (best) BASIC10.09□□□□□ -0.79
APOC4P55056 PHKG1-201ENST00000297373 1431 ntAPPRIS P2 TSL 1 (best) BASIC10.09□□□□□ -0.79
APOC4P55056 GAL3ST4-202ENST00000411994 1404 ntTSL 2 BASIC10.09□□□□□ -0.79
APOC4P55056 AC092115.1-201ENST00000566277 1402 ntBASIC10.09□□□□□ -0.79
APOC4P55056 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC10.09□□□□□ -0.79
APOC4P55056 FAM189A1-201ENST00000261275 4705 ntAPPRIS P1 TSL 5 BASIC10.09□□□□□ -0.79
APOC4P55056 SLC6A12-207ENST00000536824 2101 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
APOC4P55056 MUM1-201ENST00000415183 2837 ntAPPRIS ALT2 TSL 1 (best) BASIC10.09□□□□□ -0.79
APOC4P55056 KCNG4-201ENST00000308251 5179 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
APOC4P55056 PAX2-202ENST00000361791 3193 ntAPPRIS ALT1 TSL 2 BASIC10.09□□□□□ -0.79
APOC4P55056 CYB561-203ENST00000392976 3151 ntAPPRIS P1 TSL 3 BASIC10.09□□□□□ -0.79
APOC4P55056 LGALS4-201ENST00000307751 1535 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
APOC4P55056 BTNL8-203ENST00000400707 1512 ntTSL 2 BASIC10.09□□□□□ -0.79
APOC4P55056 SELENBP1-208ENST00000447402 1530 ntTSL 2 BASIC10.09□□□□□ -0.79
APOC4P55056 ADAT1-201ENST00000307921 1869 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
APOC4P55056 ANKRD23-201ENST00000318357 2597 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
APOC4P55056 AGFG1-204ENST00000409315 2912 ntTSL 5 BASIC10.09□□□□□ -0.79
APOC4P55056 GRB2-203ENST00000392562 3729 ntAPPRIS P1 TSL 2 BASIC10.09□□□□□ -0.79
APOC4P55056 SAFB-201ENST00000292123 3042 ntAPPRIS P3 TSL 1 (best) BASIC10.09□□□□□ -0.79
APOC4P55056 ZFP36L1-201ENST00000336440 3026 ntAPPRIS P1 TSL 2 BASIC10.09□□□□□ -0.79
APOC4P55056 TICAM1-201ENST00000248244 2676 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
APOC4P55056 FER1L5-207ENST00000641731 6294 ntAPPRIS ALT2 BASIC10.09□□□□□ -0.79
APOC4P55056 CRYGC-201ENST00000282141 629 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
APOC4P55056 GTF3C6-201ENST00000329970 952 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
APOC4P55056 KCNK18-201ENST00000334549 1155 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
APOC4P55056 APOA1-202ENST00000359492 932 ntAPPRIS P1 TSL 2 BASIC10.09□□□□□ -0.79
APOC4P55056 CUTA-203ENST00000374500 937 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
APOC4P55056 NPPC-202ENST00000409852 1051 ntAPPRIS P1 TSL 3 BASIC10.09□□□□□ -0.79
APOC4P55056 EVA1A-204ENST00000410071 777 ntAPPRIS P2 TSL 3 BASIC10.09□□□□□ -0.79
APOC4P55056 KRT18P4-201ENST00000422599 1288 ntBASIC10.09□□□□□ -0.79
APOC4P55056 MRAS-205ENST00000474559 856 ntAPPRIS P1 TSL 3 BASIC10.09□□□□□ -0.79
APOC4P55056 C21orf62-204ENST00000490358 1155 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
APOC4P55056 AL049795.2-201ENST00000515055 667 ntTSL 2 BASIC10.09□□□□□ -0.79
APOC4P55056 YPEL4-209ENST00000534711 889 ntAPPRIS P1 TSL 5 BASIC10.09□□□□□ -0.79
APOC4P55056 EIF3K-202ENST00000538434 966 ntTSL 2 BASIC10.09□□□□□ -0.79
APOC4P55056 ZNF124-206ENST00000543802 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC10.09□□□□□ -0.79
APOC4P55056 DLK1-205ENST00000556051 469 ntTSL 2 BASIC10.09□□□□□ -0.79
APOC4P55056 AC013553.1-201ENST00000560906 267 ntBASIC10.09□□□□□ -0.79
APOC4P55056 TRMT112P3-201ENST00000580149 358 ntBASIC10.09□□□□□ -0.79
APOC4P55056 AC011472.1-201ENST00000588634 569 ntTSL 4 BASIC10.09□□□□□ -0.79
APOC4P55056 TMIGD2-204ENST00000600349 333 ntAPPRIS ALT2 TSL 1 (best) BASIC10.09□□□□□ -0.79
APOC4P55056 HLA-C-210ENST00000640219 976 ntBASIC10.09□□□□□ -0.79
APOC4P55056 AC079325.2-201ENST00000641710 606 ntAPPRIS P5 BASIC10.09□□□□□ -0.79
APOC4P55056 ALDOA-203ENST00000395248 2447 ntTSL 5 BASIC10.09□□□□□ -0.79
APOC4P55056 SIMC1-205ENST00000443967 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC10.09□□□□□ -0.79
APOC4P55056 CASC2-202ENST00000426021 3232 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
APOC4P55056 SREBF1-205ENST00000395757 3696 ntAPPRIS ALT2 TSL 2 BASIC10.09□□□□□ -0.79
APOC4P55056 AL358781.1-202ENST00000321081 1360 ntBASIC10.09□□□□□ -0.79
APOC4P55056 TCL1A-201ENST00000402399 1395 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
APOC4P55056 HTR3E-205ENST00000436361 1371 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Retrieved 100 of 98,524 protein–RNA pairs in 69.7 ms