Protein–RNA interactions for Protein: O60481

ZIC3, Zinc finger protein ZIC 3, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC3O60481 AL137026.2-201ENST00000437014 841 ntTSL 2 BASIC12.33□□□□□ -0.44
ZIC3O60481 SOX2-OT-209ENST00000485035 561 ntTSL 4 BASIC12.33□□□□□ -0.44
ZIC3O60481 AC091179.2-201ENST00000495536 532 ntTSL 3 BASIC12.33□□□□□ -0.44
ZIC3O60481 AL049795.2-201ENST00000515055 667 ntTSL 2 BASIC12.33□□□□□ -0.44
ZIC3O60481 ALG1L6P-201ENST00000515248 758 ntBASIC12.33□□□□□ -0.44
ZIC3O60481 MCPH1-AS1-203ENST00000525186 869 ntTSL 3 BASIC12.33□□□□□ -0.44
ZIC3O60481 PIGCP1-201ENST00000527583 895 ntBASIC12.33□□□□□ -0.44
ZIC3O60481 EHF-208ENST00000530286 1280 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
ZIC3O60481 BAK1P2-201ENST00000532665 631 ntBASIC12.33□□□□□ -0.44
ZIC3O60481 LINC01629-201ENST00000553613 581 ntTSL 4 BASIC12.33□□□□□ -0.44
ZIC3O60481 NPTN-204ENST00000562924 1094 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
ZIC3O60481 PPCDC-206ENST00000564923 757 ntTSL 5 BASIC12.33□□□□□ -0.44
ZIC3O60481 NAA38-204ENST00000575208 529 ntTSL 3 BASIC12.33□□□□□ -0.44
ZIC3O60481 ACSM5-206ENST00000575584 1130 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
ZIC3O60481 MIR5196-201ENST00000578146 115 ntBASIC12.33□□□□□ -0.44
ZIC3O60481 AC005777.1-201ENST00000588332 187 ntBASIC12.33□□□□□ -0.44
ZIC3O60481 SOX2-OT-222ENST00000595084 853 ntTSL 5 BASIC12.33□□□□□ -0.44
ZIC3O60481 RPL37A-211ENST00000598925 775 ntTSL 5 BASIC12.33□□□□□ -0.44
ZIC3O60481 SOX2-OT-232ENST00000600386 792 ntTSL 5 BASIC12.33□□□□□ -0.44
ZIC3O60481 AL136040.2-201ENST00000618431 1130 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
ZIC3O60481 CNPY1-203ENST00000636372 2259 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
ZIC3O60481 CT55-201ENST00000276241 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
ZIC3O60481 GDAP2-201ENST00000369442 2436 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
ZIC3O60481 GLB1L-201ENST00000295759 2745 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
ZIC3O60481 CCDC117-202ENST00000421503 3766 ntTSL 2 BASIC12.33□□□□□ -0.44
ZIC3O60481 AC011298.1-201ENST00000407635 3398 ntTSL 2 BASIC12.33□□□□□ -0.44
ZIC3O60481 NCOR2-203ENST00000404621 8520 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
ZIC3O60481 ADAR-202ENST00000368474 6625 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
ZIC3O60481 ERAL1-201ENST00000254928 1925 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
ZIC3O60481 PI4KAP2-201ENST00000360806 2080 ntBASIC12.33□□□□□ -0.44
ZIC3O60481 SNHG28-201ENST00000368102 2501 ntAPPRIS P1 TSL 2 BASIC12.33□□□□□ -0.44
ZIC3O60481 AC012531.1-201ENST00000562848 2680 ntBASIC12.33□□□□□ -0.44
ZIC3O60481 GORASP1-201ENST00000319283 3722 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
ZIC3O60481 RET-205ENST00000615310 4337 ntTSL 5 BASIC12.33□□□□□ -0.44
ZIC3O60481 IL17RA-204ENST00000612619 8506 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
ZIC3O60481 TBC1D8B-203ENST00000357242 5717 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
ZIC3O60481 ATG9B-203ENST00000469530 3489 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
ZIC3O60481 TMEM63B-202ENST00000323267 3198 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
ZIC3O60481 ZNF384-204ENST00000396801 3008 ntAPPRIS P1 TSL 2 BASIC12.32□□□□□ -0.44
ZIC3O60481 OR2V1-204ENST00000641551 2423 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
ZIC3O60481 MYH7-201ENST00000355349 6087 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
ZIC3O60481 MKRN2-203ENST00000448482 1679 ntTSL 5 BASIC12.32□□□□□ -0.44
ZIC3O60481 MRPS9-201ENST00000258455 1500 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
ZIC3O60481 PDHB-201ENST00000302746 1527 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
ZIC3O60481 ATP8B3-201ENST00000310127 5095 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
ZIC3O60481 FMO5-201ENST00000254090 2632 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
ZIC3O60481 DCAF10-202ENST00000377724 3862 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
ZIC3O60481 GRSF1-201ENST00000254799 6666 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
ZIC3O60481 HTR4-203ENST00000377888 2962 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
ZIC3O60481 MSNP1-201ENST00000511640 1732 ntBASIC12.32□□□□□ -0.44
ZIC3O60481 AC025271.4-201ENST00000621477 1726 ntBASIC12.32□□□□□ -0.44
ZIC3O60481 ITGB2-208ENST00000397857 2813 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
ZIC3O60481 STARD8-201ENST00000252336 4862 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
ZIC3O60481 PRDM15-201ENST00000269844 4881 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
ZIC3O60481 PPP6R2-203ENST00000395741 3304 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
ZIC3O60481 SCFD1-203ENST00000458591 2359 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
ZIC3O60481 SPATA8-201ENST00000328504 1083 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
ZIC3O60481 RHOC-205ENST00000369636 786 ntTSL 2 BASIC12.32□□□□□ -0.44
ZIC3O60481 RHOC-207ENST00000369638 1028 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
ZIC3O60481 AK1-202ENST00000373156 757 ntAPPRIS P1 TSL 3 BASIC12.32□□□□□ -0.44
ZIC3O60481 RPL10-203ENST00000406022 748 ntTSL 3 BASIC12.32□□□□□ -0.44
ZIC3O60481 TPRKB-203ENST00000409716 816 ntTSL 5 BASIC12.32□□□□□ -0.44
ZIC3O60481 ID2-AS1-201ENST00000412712 953 ntTSL 5 BASIC12.32□□□□□ -0.44
ZIC3O60481 IZUMO1R-202ENST00000440961 805 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
ZIC3O60481 CD300LF-206ENST00000464910 996 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
ZIC3O60481 LYRM4-206ENST00000468929 1168 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
ZIC3O60481 AC104212.2-201ENST00000478813 628 ntBASIC12.32□□□□□ -0.44
ZIC3O60481 APOPT1-209ENST00000492189 513 ntTSL 3 BASIC12.32□□□□□ -0.44
ZIC3O60481 BID-209ENST00000551952 700 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
ZIC3O60481 AL359219.1-201ENST00000556311 934 ntBASIC12.32□□□□□ -0.44
ZIC3O60481 MBP-238ENST00000580402 915 ntTSL 5 BASIC12.32□□□□□ -0.44
ZIC3O60481 CSTP2-201ENST00000610599 398 ntBASIC12.32□□□□□ -0.44
ZIC3O60481 LINC00116-203ENST00000611969 441 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
ZIC3O60481 SMIM11B-202ENST00000619874 843 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
ZIC3O60481 NOP16-211ENST00000621444 954 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
ZIC3O60481 AL451007.2-201ENST00000632004 563 ntBASIC12.32□□□□□ -0.44
ZIC3O60481 LINC00431-202ENST00000636375 159 ntBASIC12.32□□□□□ -0.44
ZIC3O60481 PGBD2-202ENST00000355360 2879 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
ZIC3O60481 AC093899.2-201ENST00000513963 1935 ntAPPRIS P1 TSL 2 BASIC12.32□□□□□ -0.44
ZIC3O60481 UBA2-201ENST00000246548 4023 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
ZIC3O60481 Z82195.2-202ENST00000458525 1646 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
ZIC3O60481 FCHO1-221ENST00000597512 2934 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
ZIC3O60481 AADAT-206ENST00000509167 2113 ntAPPRIS ALT1 TSL 1 (best) BASIC12.32□□□□□ -0.44
ZIC3O60481 CTNNB1-202ENST00000396183 3268 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
ZIC3O60481 AC022028.2-201ENST00000474115 2619 ntTSL 2 BASIC12.32□□□□□ -0.44
ZIC3O60481 OGFOD3-201ENST00000313056 4287 ntAPPRIS P1 TSL 2 BASIC12.32□□□□□ -0.44
ZIC3O60481 GK-205ENST00000378946 3638 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
ZIC3O60481 PGM1-202ENST00000371084 2472 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
ZIC3O60481 TRIM71-201ENST00000383763 8685 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
ZIC3O60481 EPHA5-204ENST00000511294 5176 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
ZIC3O60481 MSL2-201ENST00000309993 4692 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
ZIC3O60481 TBC1D24-207ENST00000627285 4382 ntAPPRIS P3 TSL 5 BASIC12.32□□□□□ -0.44
ZIC3O60481 ATF3-202ENST00000341491 2033 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
ZIC3O60481 TCHH-201ENST00000368804 6900 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
ZIC3O60481 CSF2RB-203ENST00000406230 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
ZIC3O60481 LGALS4-201ENST00000307751 1535 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
ZIC3O60481 MCF2L-209ENST00000397036 1544 ntTSL 2 BASIC12.32□□□□□ -0.44
ZIC3O60481 PBXIP1-202ENST00000368463 3212 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
ZIC3O60481 PTK7-203ENST00000345201 4071 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
ZIC3O60481 NFATC2-207ENST00000610033 2740 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms