Protein–RNA interactions for Protein: O00560

SDCBP, Syntenin-1, humanhuman

Predicted RBP Predictions only

Length 298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBPO00560 ZBED2-201ENST00000317012 2311 ntAPPRIS P1 TSL 2 BASIC11.79□□□□□ -0.52
SDCBPO00560 OR8S1-201ENST00000310194 1080 ntBASIC11.79□□□□□ -0.52
SDCBPO00560 SPAG11A-201ENST00000326558 612 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
SDCBPO00560 FAM24B-202ENST00000368898 745 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
SDCBPO00560 DUSP13-202ENST00000372700 781 ntTSL 3 BASIC11.79□□□□□ -0.52
SDCBPO00560 FOLR1-202ENST00000393676 996 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
SDCBPO00560 LINC01665-201ENST00000422917 1241 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
SDCBPO00560 LINC01114-202ENST00000424321 2112 ntTSL 2 BASIC11.79□□□□□ -0.52
SDCBPO00560 AL592464.1-201ENST00000429389 429 ntTSL 2 BASIC11.79□□□□□ -0.52
SDCBPO00560 OR2R1P-201ENST00000441404 914 ntBASIC11.79□□□□□ -0.52
SDCBPO00560 ATP5G2P4-201ENST00000442175 420 ntBASIC11.79□□□□□ -0.52
SDCBPO00560 RPL13AP20-201ENST00000459725 609 ntBASIC11.79□□□□□ -0.52
SDCBPO00560 DUSP13-206ENST00000472493 920 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
SDCBPO00560 AC006487.1-201ENST00000514506 1221 ntTSL 2 BASIC11.79□□□□□ -0.52
SDCBPO00560 FAM86B1-218ENST00000534520 808 ntTSL 2 BASIC11.79□□□□□ -0.52
SDCBPO00560 ADIG-204ENST00000537425 770 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
SDCBPO00560 AC139099.3-201ENST00000572850 472 ntTSL 5 BASIC11.79□□□□□ -0.52
SDCBPO00560 FBXL12-204ENST00000586469 544 ntTSL 2 BASIC11.79□□□□□ -0.52
SDCBPO00560 AC008403.1-201ENST00000595676 443 ntAPPRIS P1 TSL 2 BASIC11.79□□□□□ -0.52
SDCBPO00560 AL096828.3-201ENST00000615354 462 ntBASIC11.79□□□□□ -0.52
SDCBPO00560 AC092299.1-201ENST00000632679 757 ntBASIC11.79□□□□□ -0.52
SDCBPO00560 BAIAP2L1-201ENST00000005260 3622 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
SDCBPO00560 AEBP1-201ENST00000223357 4081 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
SDCBPO00560 HLCS-201ENST00000336648 6010 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
SDCBPO00560 PLCXD2-204ENST00000477665 1721 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
SDCBPO00560 RFWD3-201ENST00000361070 4957 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
SDCBPO00560 SERPINB1-201ENST00000380739 2619 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
SDCBPO00560 C2-209ENST00000452323 1999 ntTSL 2 BASIC11.79□□□□□ -0.52
SDCBPO00560 EHMT2-203ENST00000375537 3965 ntAPPRIS P4 TSL 1 (best) BASIC11.79□□□□□ -0.52
SDCBPO00560 TCF3-220ENST00000611869 4409 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
SDCBPO00560 FH-201ENST00000366560 1797 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
SDCBPO00560 MAP2K3-203ENST00000361818 2034 ntTSL 5 BASIC11.79□□□□□ -0.52
SDCBPO00560 MAGED4-201ENST00000375626 2495 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
SDCBPO00560 AL139158.3-201ENST00000641212 1562 ntBASIC11.79□□□□□ -0.52
SDCBPO00560 POTEB3-201ENST00000611217 1813 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
SDCBPO00560 TLE3-220ENST00000559929 3408 ntTSL 5 BASIC11.79□□□□□ -0.52
SDCBPO00560 NCDN-203ENST00000373253 3677 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
SDCBPO00560 RAB6B-201ENST00000285208 5526 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
SDCBPO00560 MTSS1-201ENST00000325064 2777 ntTSL 2 BASIC11.79□□□□□ -0.52
SDCBPO00560 SMPDL3B-206ENST00000549094 1611 ntTSL 5 BASIC11.78□□□□□ -0.52
SDCBPO00560 AL590644.1-201ENST00000412427 4676 ntTSL 4 BASIC11.78□□□□□ -0.52
SDCBPO00560 AC237221.1-201ENST00000561575 1881 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
SDCBPO00560 GOLGA8S-201ENST00000562295 1878 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
SDCBPO00560 SLC44A3-AS1-215ENST00000634870 5956 ntTSL 5 BASIC11.78□□□□□ -0.52
SDCBPO00560 ZBED8-201ENST00000408953 2851 ntAPPRIS P1 TSL 2 BASIC11.78□□□□□ -0.52
SDCBPO00560 SPTBN2-210ENST00000611817 2890 ntTSL 2 BASIC11.78□□□□□ -0.52
SDCBPO00560 FAM86JP-201ENST00000467239 1910 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
SDCBPO00560 TIAM1-201ENST00000286827 7200 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
SDCBPO00560 AC004899.1-201ENST00000424687 1714 ntBASIC11.78□□□□□ -0.52
SDCBPO00560 USP47-202ENST00000339865 7775 ntTSL 2 BASIC11.78□□□□□ -0.52
SDCBPO00560 AC009336.2-201ENST00000468418 3521 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
SDCBPO00560 HDAC7-203ENST00000380610 3261 ntAPPRIS ALT2 TSL 2 BASIC11.78□□□□□ -0.52
SDCBPO00560 RBM15-204ENST00000617047 3284 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
SDCBPO00560 ZNF410-201ENST00000324593 2293 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
SDCBPO00560 WASHC3-201ENST00000240079 916 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
SDCBPO00560 TMEM40-201ENST00000264728 984 ntAPPRIS P3 TSL 2 BASIC11.78□□□□□ -0.52
SDCBPO00560 NUDT1-202ENST00000343985 771 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
SDCBPO00560 MRPL55-214ENST00000366741 603 ntAPPRIS P1 TSL 2 BASIC11.78□□□□□ -0.52
SDCBPO00560 MRPL55-218ENST00000366747 603 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
SDCBPO00560 EDN2-201ENST00000372587 1241 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
SDCBPO00560 GNRH2-204ENST00000380347 758 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
SDCBPO00560 IGLV2-23-201ENST00000390306 502 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
SDCBPO00560 SGK2-207ENST00000426287 1182 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
SDCBPO00560 IGHV4-4-201ENST00000455737 417 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
SDCBPO00560 AC106794.1-201ENST00000506935 792 ntBASIC11.78□□□□□ -0.52
SDCBPO00560 AP000438.1-201ENST00000543624 749 ntTSL 3 BASIC11.78□□□□□ -0.52
SDCBPO00560 AL132709.1-203ENST00000555103 569 ntTSL 4 BASIC11.78□□□□□ -0.52
SDCBPO00560 AC010491.1-202ENST00000567048 528 ntTSL 2 BASIC11.78□□□□□ -0.52
SDCBPO00560 AC090617.6-201ENST00000572790 443 ntTSL 3 BASIC11.78□□□□□ -0.52
SDCBPO00560 SEPT9-233ENST00000590917 541 ntTSL 4 BASIC11.78□□□□□ -0.52
SDCBPO00560 AL354740.1-203ENST00000593917 424 ntTSL 3 BASIC11.78□□□□□ -0.52
SDCBPO00560 ZNF772-207ENST00000601768 482 ntTSL 3 BASIC11.78□□□□□ -0.52
SDCBPO00560 AC007663.3-201ENST00000609632 465 ntBASIC11.78□□□□□ -0.52
SDCBPO00560 AL136295.7-201ENST00000619226 1200 ntBASIC11.78□□□□□ -0.52
SDCBPO00560 DDX5-235ENST00000630471 473 ntTSL 4 BASIC11.78□□□□□ -0.52
SDCBPO00560 LPCAT2-201ENST00000262134 5391 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
SDCBPO00560 KANK4-201ENST00000317477 2080 ntTSL 2 BASIC11.78□□□□□ -0.52
SDCBPO00560 DGKD-202ENST00000409813 6228 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
SDCBPO00560 ERICH1-206ENST00000522706 1551 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
SDCBPO00560 ITGA3-201ENST00000007722 3665 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
SDCBPO00560 DNAJB12-202ENST00000394903 3198 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
SDCBPO00560 SHMT1P1-201ENST00000419974 1312 ntBASIC11.78□□□□□ -0.52
SDCBPO00560 LILRB1-203ENST00000396317 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
SDCBPO00560 FAM131B-204ENST00000409578 4286 ntTSL 5 BASIC11.78□□□□□ -0.52
SDCBPO00560 CAPN1-202ENST00000524773 2960 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
SDCBPO00560 BRSK2-207ENST00000528710 3528 ntTSL 2 BASIC11.78□□□□□ -0.52
SDCBPO00560 SPICE1-201ENST00000295872 5417 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
SDCBPO00560 PASK-203ENST00000403638 5161 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
SDCBPO00560 DMAC1-201ENST00000358227 2755 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
SDCBPO00560 PDZRN3-208ENST00000479530 2778 ntTSL 2 BASIC11.78□□□□□ -0.52
SDCBPO00560 ZNF124-202ENST00000472531 2243 ntTSL 2 BASIC11.78□□□□□ -0.52
SDCBPO00560 ALG8-202ENST00000376156 1677 ntTSL 2 BASIC11.78□□□□□ -0.52
SDCBPO00560 SLC38A5-213ENST00000620913 1993 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
SDCBPO00560 URGCP-201ENST00000336086 5658 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.52
SDCBPO00560 NLRP13-201ENST00000342929 3132 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.52
SDCBPO00560 UGT3A1-201ENST00000274278 5122 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
SDCBPO00560 SIGLEC12-203ENST00000598614 1434 ntTSL 5 BASIC11.77□□□□□ -0.52
SDCBPO00560 AC009123.1-202ENST00000565643 2551 ntTSL 2 BASIC11.77□□□□□ -0.52
SDCBPO00560 SIGLECL1-201ENST00000316401 1708 ntAPPRIS P3 TSL 2 BASIC11.77□□□□□ -0.52
SDCBPO00560 MAGEA4-205ENST00000393920 1721 ntAPPRIS P1 TSL 2 BASIC11.77□□□□□ -0.52
Retrieved 100 of 98,524 protein–RNA pairs in 59.4 ms