Protein–RNA interactions for Protein: Q9Y5Z7

HCFC2, Host cell factor 2, humanhuman

Predictions only

Length 792 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2Q9Y5Z7 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC23.61■■□□□ 1.37
HCFC2Q9Y5Z7 SHF-207ENST00000560540 2062 ntTSL 5 BASIC23.61■■□□□ 1.37
HCFC2Q9Y5Z7 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
HCFC2Q9Y5Z7 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
HCFC2Q9Y5Z7 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
HCFC2Q9Y5Z7 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
HCFC2Q9Y5Z7 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
HCFC2Q9Y5Z7 AC135731.1-201ENST00000569415 2548 ntBASIC23.6■■□□□ 1.37
HCFC2Q9Y5Z7 NT5C3AP1-201ENST00000394500 1012 ntBASIC23.6■■□□□ 1.37
HCFC2Q9Y5Z7 DENND3-207ENST00000518347 850 ntTSL 2 BASIC23.6■■□□□ 1.37
HCFC2Q9Y5Z7 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC23.6■■□□□ 1.37
HCFC2Q9Y5Z7 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC23.6■■□□□ 1.37
HCFC2Q9Y5Z7 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC23.6■■□□□ 1.37
HCFC2Q9Y5Z7 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
HCFC2Q9Y5Z7 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
HCFC2Q9Y5Z7 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC23.59■■□□□ 1.37
HCFC2Q9Y5Z7 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
HCFC2Q9Y5Z7 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC23.59■■□□□ 1.37
HCFC2Q9Y5Z7 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
HCFC2Q9Y5Z7 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
HCFC2Q9Y5Z7 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
HCFC2Q9Y5Z7 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
HCFC2Q9Y5Z7 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC23.59■■□□□ 1.37
HCFC2Q9Y5Z7 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC23.59■■□□□ 1.37
HCFC2Q9Y5Z7 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC23.59■■□□□ 1.37
HCFC2Q9Y5Z7 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC23.59■■□□□ 1.37
HCFC2Q9Y5Z7 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC23.59■■□□□ 1.37
HCFC2Q9Y5Z7 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC23.59■■□□□ 1.37
HCFC2Q9Y5Z7 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
HCFC2Q9Y5Z7 MPST-204ENST00000404393 1329 ntTSL 5 BASIC23.59■■□□□ 1.37
HCFC2Q9Y5Z7 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
HCFC2Q9Y5Z7 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
HCFC2Q9Y5Z7 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC23.58■■□□□ 1.37
HCFC2Q9Y5Z7 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC23.58■■□□□ 1.37
HCFC2Q9Y5Z7 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC23.58■■□□□ 1.37
HCFC2Q9Y5Z7 DUX4L4-201ENST00000566884 1269 ntBASIC23.58■■□□□ 1.37
HCFC2Q9Y5Z7 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC23.58■■□□□ 1.37
HCFC2Q9Y5Z7 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC23.58■■□□□ 1.36
HCFC2Q9Y5Z7 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC23.58■■□□□ 1.36
HCFC2Q9Y5Z7 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC23.57■■□□□ 1.36
HCFC2Q9Y5Z7 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
HCFC2Q9Y5Z7 FP325331.1-202ENST00000623531 1380 ntBASIC23.57■■□□□ 1.36
HCFC2Q9Y5Z7 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
HCFC2Q9Y5Z7 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
HCFC2Q9Y5Z7 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC23.57■■□□□ 1.36
HCFC2Q9Y5Z7 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC23.57■■□□□ 1.36
HCFC2Q9Y5Z7 AP005435.1-201ENST00000529293 1178 ntBASIC23.57■■□□□ 1.36
HCFC2Q9Y5Z7 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC23.57■■□□□ 1.36
HCFC2Q9Y5Z7 LZTS2-201ENST00000370220 5741 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
HCFC2Q9Y5Z7 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC23.57■■□□□ 1.36
HCFC2Q9Y5Z7 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
HCFC2Q9Y5Z7 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC23.56■■□□□ 1.36
HCFC2Q9Y5Z7 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC23.56■■□□□ 1.36
HCFC2Q9Y5Z7 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC23.56■■□□□ 1.36
HCFC2Q9Y5Z7 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC23.55■■□□□ 1.36
HCFC2Q9Y5Z7 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC23.55■■□□□ 1.36
HCFC2Q9Y5Z7 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC23.55■■□□□ 1.36
HCFC2Q9Y5Z7 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC23.55■■□□□ 1.36
HCFC2Q9Y5Z7 AC105233.4-201ENST00000642045 216 ntBASIC23.55■■□□□ 1.36
HCFC2Q9Y5Z7 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
HCFC2Q9Y5Z7 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC23.55■■□□□ 1.36
HCFC2Q9Y5Z7 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC23.55■■□□□ 1.36
HCFC2Q9Y5Z7 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC23.55■■□□□ 1.36
HCFC2Q9Y5Z7 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC23.55■■□□□ 1.36
HCFC2Q9Y5Z7 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC23.55■■□□□ 1.36
HCFC2Q9Y5Z7 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
HCFC2Q9Y5Z7 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC23.54■■□□□ 1.36
HCFC2Q9Y5Z7 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
HCFC2Q9Y5Z7 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
HCFC2Q9Y5Z7 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC23.54■■□□□ 1.36
HCFC2Q9Y5Z7 HLA-L-209ENST00000420110 1011 ntBASIC23.54■■□□□ 1.36
HCFC2Q9Y5Z7 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC23.54■■□□□ 1.36
HCFC2Q9Y5Z7 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC23.54■■□□□ 1.36
HCFC2Q9Y5Z7 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC23.54■■□□□ 1.36
HCFC2Q9Y5Z7 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC23.54■■□□□ 1.36
HCFC2Q9Y5Z7 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
HCFC2Q9Y5Z7 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
HCFC2Q9Y5Z7 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC23.53■■□□□ 1.36
HCFC2Q9Y5Z7 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
HCFC2Q9Y5Z7 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC23.53■■□□□ 1.36
HCFC2Q9Y5Z7 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC23.53■■□□□ 1.36
HCFC2Q9Y5Z7 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC23.53■■□□□ 1.36
HCFC2Q9Y5Z7 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC23.53■■□□□ 1.36
HCFC2Q9Y5Z7 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
HCFC2Q9Y5Z7 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
HCFC2Q9Y5Z7 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC23.53■■□□□ 1.36
HCFC2Q9Y5Z7 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC23.53■■□□□ 1.36
HCFC2Q9Y5Z7 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC23.53■■□□□ 1.36
HCFC2Q9Y5Z7 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC23.53■■□□□ 1.36
HCFC2Q9Y5Z7 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
HCFC2Q9Y5Z7 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC23.53■■□□□ 1.36
HCFC2Q9Y5Z7 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC23.52■■□□□ 1.36
HCFC2Q9Y5Z7 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC23.52■■□□□ 1.36
HCFC2Q9Y5Z7 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
HCFC2Q9Y5Z7 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC23.52■■□□□ 1.36
HCFC2Q9Y5Z7 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC23.52■■□□□ 1.36
HCFC2Q9Y5Z7 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC23.52■■□□□ 1.36
HCFC2Q9Y5Z7 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC23.52■■□□□ 1.36
HCFC2Q9Y5Z7 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC23.52■■□□□ 1.36
HCFC2Q9Y5Z7 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC23.52■■□□□ 1.36
Retrieved 100 of 98,524 protein–RNA pairs in 58.6 ms