Protein–RNA interactions for Protein: Q9Y5G9

PCDHGA4, Protocadherin gamma-A4, humanhuman

Predictions only

Length 962 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA4Q9Y5G9 ALDH1A3-203ENST00000557963 1670 ntBASIC21.87■■□□□ 1.09
PCDHGA4Q9Y5G9 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC21.87■■□□□ 1.09
PCDHGA4Q9Y5G9 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC21.86■■□□□ 1.09
PCDHGA4Q9Y5G9 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC21.86■■□□□ 1.09
PCDHGA4Q9Y5G9 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC21.86■■□□□ 1.09
PCDHGA4Q9Y5G9 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
PCDHGA4Q9Y5G9 HYI-206ENST00000372434 1025 ntTSL 5 BASIC21.86■■□□□ 1.09
PCDHGA4Q9Y5G9 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC21.86■■□□□ 1.09
PCDHGA4Q9Y5G9 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC21.86■■□□□ 1.09
PCDHGA4Q9Y5G9 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
PCDHGA4Q9Y5G9 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
PCDHGA4Q9Y5G9 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC21.86■■□□□ 1.09
PCDHGA4Q9Y5G9 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC21.85■■□□□ 1.09
PCDHGA4Q9Y5G9 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
PCDHGA4Q9Y5G9 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
PCDHGA4Q9Y5G9 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
PCDHGA4Q9Y5G9 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC21.85■■□□□ 1.09
PCDHGA4Q9Y5G9 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
PCDHGA4Q9Y5G9 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
PCDHGA4Q9Y5G9 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC21.85■■□□□ 1.09
PCDHGA4Q9Y5G9 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC21.85■■□□□ 1.09
PCDHGA4Q9Y5G9 C9orf163-202ENST00000624034 2573 ntBASIC21.85■■□□□ 1.09
PCDHGA4Q9Y5G9 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
PCDHGA4Q9Y5G9 EI24-204ENST00000527235 1625 ntTSL 5 BASIC21.84■■□□□ 1.09
PCDHGA4Q9Y5G9 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
PCDHGA4Q9Y5G9 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
PCDHGA4Q9Y5G9 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
PCDHGA4Q9Y5G9 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
PCDHGA4Q9Y5G9 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC21.84■■□□□ 1.09
PCDHGA4Q9Y5G9 AC105265.2-201ENST00000467189 838 ntBASIC21.84■■□□□ 1.09
PCDHGA4Q9Y5G9 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
PCDHGA4Q9Y5G9 AC068473.5-201ENST00000616428 2072 ntBASIC21.84■■□□□ 1.09
PCDHGA4Q9Y5G9 REST-206ENST00000612429 1376 ntTSL 5 BASIC21.84■■□□□ 1.09
PCDHGA4Q9Y5G9 REST-207ENST00000616975 1370 ntTSL 5 BASIC21.84■■□□□ 1.09
PCDHGA4Q9Y5G9 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
PCDHGA4Q9Y5G9 EI24-213ENST00000618552 1747 ntTSL 5 BASIC21.83■■□□□ 1.09
PCDHGA4Q9Y5G9 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC21.83■■□□□ 1.09
PCDHGA4Q9Y5G9 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC21.83■■□□□ 1.09
PCDHGA4Q9Y5G9 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
PCDHGA4Q9Y5G9 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC21.83■■□□□ 1.09
PCDHGA4Q9Y5G9 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC21.83■■□□□ 1.09
PCDHGA4Q9Y5G9 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.09
PCDHGA4Q9Y5G9 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
PCDHGA4Q9Y5G9 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
PCDHGA4Q9Y5G9 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC21.83■■□□□ 1.08
PCDHGA4Q9Y5G9 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
PCDHGA4Q9Y5G9 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC21.82■■□□□ 1.08
PCDHGA4Q9Y5G9 ABCB10P4-201ENST00000566803 2184 ntBASIC21.82■■□□□ 1.08
PCDHGA4Q9Y5G9 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
PCDHGA4Q9Y5G9 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC21.82■■□□□ 1.08
PCDHGA4Q9Y5G9 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC21.82■■□□□ 1.08
PCDHGA4Q9Y5G9 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
PCDHGA4Q9Y5G9 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
PCDHGA4Q9Y5G9 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
PCDHGA4Q9Y5G9 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC21.82■■□□□ 1.08
PCDHGA4Q9Y5G9 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
PCDHGA4Q9Y5G9 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
PCDHGA4Q9Y5G9 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
PCDHGA4Q9Y5G9 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC21.82■■□□□ 1.08
PCDHGA4Q9Y5G9 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC21.81■■□□□ 1.08
PCDHGA4Q9Y5G9 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
PCDHGA4Q9Y5G9 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
PCDHGA4Q9Y5G9 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
PCDHGA4Q9Y5G9 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
PCDHGA4Q9Y5G9 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC21.81■■□□□ 1.08
PCDHGA4Q9Y5G9 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC21.81■■□□□ 1.08
PCDHGA4Q9Y5G9 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
PCDHGA4Q9Y5G9 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
PCDHGA4Q9Y5G9 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
PCDHGA4Q9Y5G9 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
PCDHGA4Q9Y5G9 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC21.8■■□□□ 1.08
PCDHGA4Q9Y5G9 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC21.8■■□□□ 1.08
PCDHGA4Q9Y5G9 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
PCDHGA4Q9Y5G9 AF213884.3-201ENST00000563833 479 ntBASIC21.8■■□□□ 1.08
PCDHGA4Q9Y5G9 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC21.8■■□□□ 1.08
PCDHGA4Q9Y5G9 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC21.8■■□□□ 1.08
PCDHGA4Q9Y5G9 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
PCDHGA4Q9Y5G9 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
PCDHGA4Q9Y5G9 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC21.79■■□□□ 1.08
PCDHGA4Q9Y5G9 GRAMD4P4-201ENST00000613563 1115 ntBASIC21.79■■□□□ 1.08
PCDHGA4Q9Y5G9 AL136967.2-201ENST00000623968 743 ntBASIC21.79■■□□□ 1.08
PCDHGA4Q9Y5G9 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC21.79■■□□□ 1.08
PCDHGA4Q9Y5G9 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
PCDHGA4Q9Y5G9 GATM-206ENST00000558336 1522 ntTSL 2 BASIC21.79■■□□□ 1.08
PCDHGA4Q9Y5G9 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
PCDHGA4Q9Y5G9 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC21.79■■□□□ 1.08
PCDHGA4Q9Y5G9 AC005703.6-201ENST00000623265 1329 ntBASIC21.79■■□□□ 1.08
PCDHGA4Q9Y5G9 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
PCDHGA4Q9Y5G9 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC21.79■■□□□ 1.08
PCDHGA4Q9Y5G9 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
PCDHGA4Q9Y5G9 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC21.78■■□□□ 1.08
PCDHGA4Q9Y5G9 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC21.78■■□□□ 1.08
PCDHGA4Q9Y5G9 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
PCDHGA4Q9Y5G9 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
PCDHGA4Q9Y5G9 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
PCDHGA4Q9Y5G9 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
PCDHGA4Q9Y5G9 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC21.78■■□□□ 1.08
PCDHGA4Q9Y5G9 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC21.78■■□□□ 1.08
PCDHGA4Q9Y5G9 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
PCDHGA4Q9Y5G9 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC21.78■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 13.6 ms