Protein–RNA interactions for Protein: Q9Y3B4

SF3B6, Splicing factor 3B subunit 6, humanhuman

Known RBP Predictions only

Length 125 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B6Q9Y3B4 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
SF3B6Q9Y3B4 AC080038.3-201ENST00000623346 1952 ntBASIC19.79■□□□□ 0.76
SF3B6Q9Y3B4 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
SF3B6Q9Y3B4 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
SF3B6Q9Y3B4 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
SF3B6Q9Y3B4 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC19.79■□□□□ 0.76
SF3B6Q9Y3B4 TSPY13P-201ENST00000338964 914 ntBASIC19.79■□□□□ 0.76
SF3B6Q9Y3B4 AL592295.1-201ENST00000400984 884 ntBASIC19.79■□□□□ 0.76
SF3B6Q9Y3B4 RPS2P7-201ENST00000447334 885 ntBASIC19.79■□□□□ 0.76
SF3B6Q9Y3B4 MED17-221ENST00000639724 2317 ntTSL 5 BASIC19.79■□□□□ 0.76
SF3B6Q9Y3B4 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SF3B6Q9Y3B4 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC19.78■□□□□ 0.76
SF3B6Q9Y3B4 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
SF3B6Q9Y3B4 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
SF3B6Q9Y3B4 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SF3B6Q9Y3B4 ATP5G2P3-201ENST00000429083 425 ntBASIC19.78■□□□□ 0.76
SF3B6Q9Y3B4 AC018755.3-202ENST00000596210 929 ntBASIC19.78■□□□□ 0.76
SF3B6Q9Y3B4 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
SF3B6Q9Y3B4 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
SF3B6Q9Y3B4 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
SF3B6Q9Y3B4 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
SF3B6Q9Y3B4 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
SF3B6Q9Y3B4 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
SF3B6Q9Y3B4 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
SF3B6Q9Y3B4 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
SF3B6Q9Y3B4 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC19.77■□□□□ 0.76
SF3B6Q9Y3B4 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
SF3B6Q9Y3B4 AC004987.1-201ENST00000428627 508 ntBASIC19.77■□□□□ 0.76
SF3B6Q9Y3B4 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC19.77■□□□□ 0.76
SF3B6Q9Y3B4 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
SF3B6Q9Y3B4 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
SF3B6Q9Y3B4 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
SF3B6Q9Y3B4 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
SF3B6Q9Y3B4 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC19.77■□□□□ 0.76
SF3B6Q9Y3B4 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
SF3B6Q9Y3B4 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
SF3B6Q9Y3B4 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
SF3B6Q9Y3B4 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
SF3B6Q9Y3B4 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SF3B6Q9Y3B4 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SF3B6Q9Y3B4 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
SF3B6Q9Y3B4 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC19.76■□□□□ 0.75
SF3B6Q9Y3B4 AC026310.3-201ENST00000625186 2373 ntBASIC19.76■□□□□ 0.75
SF3B6Q9Y3B4 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
SF3B6Q9Y3B4 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC19.75■□□□□ 0.75
SF3B6Q9Y3B4 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SF3B6Q9Y3B4 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
SF3B6Q9Y3B4 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SF3B6Q9Y3B4 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC19.75■□□□□ 0.75
SF3B6Q9Y3B4 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
SF3B6Q9Y3B4 AL033527.3-201ENST00000566366 1196 ntBASIC19.75■□□□□ 0.75
SF3B6Q9Y3B4 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SF3B6Q9Y3B4 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SF3B6Q9Y3B4 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SF3B6Q9Y3B4 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SF3B6Q9Y3B4 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC19.75■□□□□ 0.75
SF3B6Q9Y3B4 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC19.75■□□□□ 0.75
SF3B6Q9Y3B4 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
SF3B6Q9Y3B4 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
SF3B6Q9Y3B4 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
SF3B6Q9Y3B4 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
SF3B6Q9Y3B4 SLC25A24-204ENST00000569674 2357 ntBASIC19.74■□□□□ 0.75
SF3B6Q9Y3B4 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
SF3B6Q9Y3B4 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
SF3B6Q9Y3B4 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
SF3B6Q9Y3B4 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC19.74■□□□□ 0.75
SF3B6Q9Y3B4 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC19.74■□□□□ 0.75
SF3B6Q9Y3B4 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
SF3B6Q9Y3B4 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
SF3B6Q9Y3B4 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC19.73■□□□□ 0.75
SF3B6Q9Y3B4 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
SF3B6Q9Y3B4 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SF3B6Q9Y3B4 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
SF3B6Q9Y3B4 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
SF3B6Q9Y3B4 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
SF3B6Q9Y3B4 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC19.73■□□□□ 0.75
SF3B6Q9Y3B4 DUX4L9-201ENST00000449051 1259 ntBASIC19.73■□□□□ 0.75
SF3B6Q9Y3B4 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
SF3B6Q9Y3B4 MIR6765-201ENST00000614092 87 ntBASIC19.73■□□□□ 0.75
SF3B6Q9Y3B4 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC19.73■□□□□ 0.75
SF3B6Q9Y3B4 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SF3B6Q9Y3B4 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SF3B6Q9Y3B4 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
SF3B6Q9Y3B4 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC19.73■□□□□ 0.75
SF3B6Q9Y3B4 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC19.73■□□□□ 0.75
SF3B6Q9Y3B4 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
SF3B6Q9Y3B4 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SF3B6Q9Y3B4 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC19.72■□□□□ 0.75
SF3B6Q9Y3B4 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
SF3B6Q9Y3B4 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SF3B6Q9Y3B4 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC19.72■□□□□ 0.75
SF3B6Q9Y3B4 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SF3B6Q9Y3B4 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC19.71■□□□□ 0.75
SF3B6Q9Y3B4 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
SF3B6Q9Y3B4 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC19.71■□□□□ 0.75
SF3B6Q9Y3B4 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC19.71■□□□□ 0.75
SF3B6Q9Y3B4 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SF3B6Q9Y3B4 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC19.71■□□□□ 0.75
SF3B6Q9Y3B4 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SF3B6Q9Y3B4 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC19.71■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 75.2 ms