Protein–RNA interactions for Protein: Q9UBX1

CTSF, Cathepsin F, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSFQ9UBX1 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC21.04■□□□□ 0.96
CTSFQ9UBX1 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC21.04■□□□□ 0.96
CTSFQ9UBX1 FP325331.1-202ENST00000623531 1380 ntBASIC21.04■□□□□ 0.96
CTSFQ9UBX1 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
CTSFQ9UBX1 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CTSFQ9UBX1 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC21.04■□□□□ 0.96
CTSFQ9UBX1 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
CTSFQ9UBX1 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC21.04■□□□□ 0.96
CTSFQ9UBX1 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
CTSFQ9UBX1 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
CTSFQ9UBX1 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC21.03■□□□□ 0.96
CTSFQ9UBX1 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CTSFQ9UBX1 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CTSFQ9UBX1 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC21.03■□□□□ 0.96
CTSFQ9UBX1 DUX4L4-201ENST00000566884 1269 ntBASIC21.03■□□□□ 0.96
CTSFQ9UBX1 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC21.03■□□□□ 0.96
CTSFQ9UBX1 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CTSFQ9UBX1 LINC01529-204ENST00000636474 1715 ntBASIC21.03■□□□□ 0.96
CTSFQ9UBX1 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC21.03■□□□□ 0.96
CTSFQ9UBX1 AC133637.1-201ENST00000624115 1537 ntBASIC21.03■□□□□ 0.96
CTSFQ9UBX1 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC21.02■□□□□ 0.96
CTSFQ9UBX1 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.96
CTSFQ9UBX1 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CTSFQ9UBX1 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CTSFQ9UBX1 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC21.02■□□□□ 0.96
CTSFQ9UBX1 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
CTSFQ9UBX1 BX842568.3-201ENST00000418104 571 ntBASIC21.02■□□□□ 0.96
CTSFQ9UBX1 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
CTSFQ9UBX1 AC233992.3-201ENST00000607491 485 ntBASIC21.02■□□□□ 0.96
CTSFQ9UBX1 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
CTSFQ9UBX1 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
CTSFQ9UBX1 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC21.02■□□□□ 0.96
CTSFQ9UBX1 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC21.02■□□□□ 0.96
CTSFQ9UBX1 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CTSFQ9UBX1 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC21.02■□□□□ 0.96
CTSFQ9UBX1 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC21.02■□□□□ 0.95
CTSFQ9UBX1 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
CTSFQ9UBX1 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
CTSFQ9UBX1 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC21.02■□□□□ 0.95
CTSFQ9UBX1 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
CTSFQ9UBX1 AC079630.1-202ENST00000618127 1840 ntBASIC21.01■□□□□ 0.95
CTSFQ9UBX1 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC21.01■□□□□ 0.95
CTSFQ9UBX1 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CTSFQ9UBX1 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CTSFQ9UBX1 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC21.01■□□□□ 0.95
CTSFQ9UBX1 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
CTSFQ9UBX1 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC21.01■□□□□ 0.95
CTSFQ9UBX1 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
CTSFQ9UBX1 SNX3-202ENST00000349379 890 ntTSL 2 BASIC21.01■□□□□ 0.95
CTSFQ9UBX1 LGR4-203ENST00000480977 492 ntTSL 2 BASIC21.01■□□□□ 0.95
CTSFQ9UBX1 AL499627.2-201ENST00000606283 725 ntBASIC21.01■□□□□ 0.95
CTSFQ9UBX1 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CTSFQ9UBX1 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
CTSFQ9UBX1 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC21■□□□□ 0.95
CTSFQ9UBX1 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC21■□□□□ 0.95
CTSFQ9UBX1 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
CTSFQ9UBX1 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC21■□□□□ 0.95
CTSFQ9UBX1 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC21■□□□□ 0.95
CTSFQ9UBX1 SLC47A1P1-202ENST00000449666 945 ntBASIC21■□□□□ 0.95
CTSFQ9UBX1 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC21■□□□□ 0.95
CTSFQ9UBX1 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC21■□□□□ 0.95
CTSFQ9UBX1 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
CTSFQ9UBX1 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC21■□□□□ 0.95
CTSFQ9UBX1 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC21■□□□□ 0.95
CTSFQ9UBX1 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC21■□□□□ 0.95
CTSFQ9UBX1 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC21■□□□□ 0.95
CTSFQ9UBX1 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CTSFQ9UBX1 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CTSFQ9UBX1 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CTSFQ9UBX1 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC20.99■□□□□ 0.95
CTSFQ9UBX1 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
CTSFQ9UBX1 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC20.99■□□□□ 0.95
CTSFQ9UBX1 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CTSFQ9UBX1 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
CTSFQ9UBX1 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC20.99■□□□□ 0.95
CTSFQ9UBX1 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
CTSFQ9UBX1 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
CTSFQ9UBX1 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CTSFQ9UBX1 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CTSFQ9UBX1 H19-210ENST00000439725 1929 ntTSL 2 BASIC20.98■□□□□ 0.95
CTSFQ9UBX1 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
CTSFQ9UBX1 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC20.98■□□□□ 0.95
CTSFQ9UBX1 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CTSFQ9UBX1 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CTSFQ9UBX1 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
CTSFQ9UBX1 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
CTSFQ9UBX1 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CTSFQ9UBX1 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CTSFQ9UBX1 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC20.98■□□□□ 0.95
CTSFQ9UBX1 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC20.98■□□□□ 0.95
CTSFQ9UBX1 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
CTSFQ9UBX1 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC20.98■□□□□ 0.95
CTSFQ9UBX1 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
CTSFQ9UBX1 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC20.97■□□□□ 0.95
CTSFQ9UBX1 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC20.97■□□□□ 0.95
CTSFQ9UBX1 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC20.97■□□□□ 0.95
CTSFQ9UBX1 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CTSFQ9UBX1 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
CTSFQ9UBX1 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
CTSFQ9UBX1 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms