Protein–RNA interactions for Protein: Q9NRR3

CDC42SE2, CDC42 small effector protein 2, humanhuman

Predictions only

Length 84 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2Q9NRR3 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
CDC42SE2Q9NRR3 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
CDC42SE2Q9NRR3 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
CDC42SE2Q9NRR3 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC15.36■□□□□ 0.05
CDC42SE2Q9NRR3 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
CDC42SE2Q9NRR3 PKD1P6-201ENST00000343738 4769 ntBASIC15.36■□□□□ 0.05
CDC42SE2Q9NRR3 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
CDC42SE2Q9NRR3 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
CDC42SE2Q9NRR3 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
CDC42SE2Q9NRR3 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC15.36■□□□□ 0.05
CDC42SE2Q9NRR3 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC15.36■□□□□ 0.05
CDC42SE2Q9NRR3 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC15.36■□□□□ 0.05
CDC42SE2Q9NRR3 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC15.36■□□□□ 0.05
CDC42SE2Q9NRR3 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
CDC42SE2Q9NRR3 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
CDC42SE2Q9NRR3 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC15.36■□□□□ 0.05
CDC42SE2Q9NRR3 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC15.36■□□□□ 0.05
CDC42SE2Q9NRR3 MIR4281-201ENST00000580852 62 ntBASIC15.36■□□□□ 0.05
CDC42SE2Q9NRR3 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC15.36■□□□□ 0.05
CDC42SE2Q9NRR3 BHLHE23-202ENST00000612929 1109 ntBASIC15.36■□□□□ 0.05
CDC42SE2Q9NRR3 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC15.36■□□□□ 0.05
CDC42SE2Q9NRR3 AC074183.2-201ENST00000623112 922 ntBASIC15.36■□□□□ 0.05
CDC42SE2Q9NRR3 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC15.36■□□□□ 0.05
CDC42SE2Q9NRR3 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC15.36■□□□□ 0.05
CDC42SE2Q9NRR3 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
CDC42SE2Q9NRR3 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
CDC42SE2Q9NRR3 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC15.36■□□□□ 0.05
CDC42SE2Q9NRR3 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
CDC42SE2Q9NRR3 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CDC42SE2Q9NRR3 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC15.35■□□□□ 0.05
CDC42SE2Q9NRR3 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC15.35■□□□□ 0.05
CDC42SE2Q9NRR3 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
CDC42SE2Q9NRR3 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
CDC42SE2Q9NRR3 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC15.35■□□□□ 0.05
CDC42SE2Q9NRR3 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
CDC42SE2Q9NRR3 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
CDC42SE2Q9NRR3 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CDC42SE2Q9NRR3 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC15.35■□□□□ 0.05
CDC42SE2Q9NRR3 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC15.35■□□□□ 0.05
CDC42SE2Q9NRR3 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CDC42SE2Q9NRR3 USF2-207ENST00000595068 1612 ntTSL 5 BASIC15.35■□□□□ 0.05
CDC42SE2Q9NRR3 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CDC42SE2Q9NRR3 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC15.35■□□□□ 0.05
CDC42SE2Q9NRR3 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CDC42SE2Q9NRR3 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
CDC42SE2Q9NRR3 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC15.35■□□□□ 0.05
CDC42SE2Q9NRR3 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CDC42SE2Q9NRR3 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CDC42SE2Q9NRR3 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
CDC42SE2Q9NRR3 WWC2-AS2-201ENST00000578387 2183 ntBASIC15.34■□□□□ 0.05
CDC42SE2Q9NRR3 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CDC42SE2Q9NRR3 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
CDC42SE2Q9NRR3 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC15.34■□□□□ 0.05
CDC42SE2Q9NRR3 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC15.34■□□□□ 0.05
CDC42SE2Q9NRR3 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
CDC42SE2Q9NRR3 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC15.34■□□□□ 0.05
CDC42SE2Q9NRR3 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
CDC42SE2Q9NRR3 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
CDC42SE2Q9NRR3 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC15.34■□□□□ 0.05
CDC42SE2Q9NRR3 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CDC42SE2Q9NRR3 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC15.34■□□□□ 0.05
CDC42SE2Q9NRR3 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CDC42SE2Q9NRR3 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CDC42SE2Q9NRR3 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CDC42SE2Q9NRR3 LSM7-203ENST00000585409 512 ntTSL 2 BASIC15.33■□□□□ 0.04
CDC42SE2Q9NRR3 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
CDC42SE2Q9NRR3 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
CDC42SE2Q9NRR3 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
CDC42SE2Q9NRR3 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC15.33■□□□□ 0.04
CDC42SE2Q9NRR3 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CDC42SE2Q9NRR3 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
CDC42SE2Q9NRR3 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CDC42SE2Q9NRR3 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
CDC42SE2Q9NRR3 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC15.33■□□□□ 0.04
CDC42SE2Q9NRR3 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CDC42SE2Q9NRR3 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC15.32■□□□□ 0.04
CDC42SE2Q9NRR3 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC15.32■□□□□ 0.04
CDC42SE2Q9NRR3 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC15.32■□□□□ 0.04
CDC42SE2Q9NRR3 ABHD17AP5-201ENST00000580133 923 ntBASIC15.32■□□□□ 0.04
CDC42SE2Q9NRR3 NTF6A-201ENST00000591175 560 ntBASIC15.32■□□□□ 0.04
CDC42SE2Q9NRR3 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC15.32■□□□□ 0.04
CDC42SE2Q9NRR3 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CDC42SE2Q9NRR3 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC15.32■□□□□ 0.04
CDC42SE2Q9NRR3 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
CDC42SE2Q9NRR3 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CDC42SE2Q9NRR3 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CDC42SE2Q9NRR3 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CDC42SE2Q9NRR3 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CDC42SE2Q9NRR3 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
CDC42SE2Q9NRR3 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC15.31■□□□□ 0.04
CDC42SE2Q9NRR3 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC15.31■□□□□ 0.04
CDC42SE2Q9NRR3 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CDC42SE2Q9NRR3 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC15.31■□□□□ 0.04
CDC42SE2Q9NRR3 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC15.31■□□□□ 0.04
CDC42SE2Q9NRR3 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
CDC42SE2Q9NRR3 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
CDC42SE2Q9NRR3 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
CDC42SE2Q9NRR3 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CDC42SE2Q9NRR3 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CDC42SE2Q9NRR3 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 19.2 ms