Protein–RNA interactions for Protein: Q9H9Z2

LIN28A, Protein lin-28 homolog A, humanhuman

Known RBP Predictions only

Length 209 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIN28AQ9H9Z2 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC21.31■■□□□ 1
LIN28AQ9H9Z2 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC21.31■■□□□ 1
LIN28AQ9H9Z2 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC21.31■■□□□ 1
LIN28AQ9H9Z2 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
LIN28AQ9H9Z2 CD72-202ENST00000378430 585 ntTSL 3 BASIC21.31■■□□□ 1
LIN28AQ9H9Z2 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC21.31■■□□□ 1
LIN28AQ9H9Z2 EXOG-217ENST00000630638 197 ntTSL 5 BASIC21.31■■□□□ 1
LIN28AQ9H9Z2 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC21.31■■□□□ 1
LIN28AQ9H9Z2 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC21.31■■□□□ 1
LIN28AQ9H9Z2 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC21.31■■□□□ 1
LIN28AQ9H9Z2 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC21.31■■□□□ 1
LIN28AQ9H9Z2 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
LIN28AQ9H9Z2 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC21.3■■□□□ 1
LIN28AQ9H9Z2 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC21.3■■□□□ 1
LIN28AQ9H9Z2 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
LIN28AQ9H9Z2 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC21.3■■□□□ 1
LIN28AQ9H9Z2 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
LIN28AQ9H9Z2 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
LIN28AQ9H9Z2 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC21.3■■□□□ 1
LIN28AQ9H9Z2 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC21.3■■□□□ 1
LIN28AQ9H9Z2 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
LIN28AQ9H9Z2 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC21.3■■□□□ 1
LIN28AQ9H9Z2 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
LIN28AQ9H9Z2 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC21.3■■□□□ 1
LIN28AQ9H9Z2 LSM7-203ENST00000585409 512 ntTSL 2 BASIC21.3■■□□□ 1
LIN28AQ9H9Z2 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC21.3■■□□□ 1
LIN28AQ9H9Z2 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC21.3■■□□□ 1
LIN28AQ9H9Z2 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
LIN28AQ9H9Z2 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC21.29■■□□□ 1
LIN28AQ9H9Z2 AL022069.1-201ENST00000568025 1636 ntBASIC21.29■■□□□ 1
LIN28AQ9H9Z2 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
LIN28AQ9H9Z2 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC21.29■■□□□ 1
LIN28AQ9H9Z2 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC21.29■■□□□ 1
LIN28AQ9H9Z2 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
LIN28AQ9H9Z2 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC21.29■■□□□ 1
LIN28AQ9H9Z2 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
LIN28AQ9H9Z2 MIR6724-1-201ENST00000616420 92 ntBASIC21.29■■□□□ 1
LIN28AQ9H9Z2 MIR6724-2-201ENST00000616483 92 ntBASIC21.29■■□□□ 1
LIN28AQ9H9Z2 MIR6724-4-201ENST00000617390 92 ntBASIC21.29■■□□□ 1
LIN28AQ9H9Z2 MIR6724-3-201ENST00000622482 92 ntBASIC21.29■■□□□ 1
LIN28AQ9H9Z2 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
LIN28AQ9H9Z2 AL137060.1-201ENST00000618151 2648 ntBASIC21.29■■□□□ 1
LIN28AQ9H9Z2 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC21.29■■□□□ 1
LIN28AQ9H9Z2 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
LIN28AQ9H9Z2 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC21.29■■□□□ 1
LIN28AQ9H9Z2 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
LIN28AQ9H9Z2 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC21.28■■□□□ 1
LIN28AQ9H9Z2 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC21.28■■□□□ 1
LIN28AQ9H9Z2 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC21.28■■□□□ 1
LIN28AQ9H9Z2 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC21.28■■□□□ 1
LIN28AQ9H9Z2 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC21.28■■□□□ 1
LIN28AQ9H9Z2 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC21.28■■□□□ 1
LIN28AQ9H9Z2 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
LIN28AQ9H9Z2 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC21.28■■□□□ 1
LIN28AQ9H9Z2 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
LIN28AQ9H9Z2 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC21.28■■□□□ 1
LIN28AQ9H9Z2 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC21.28■■□□□ 1
LIN28AQ9H9Z2 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
LIN28AQ9H9Z2 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
LIN28AQ9H9Z2 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC21.28■■□□□ 1
LIN28AQ9H9Z2 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC21.28■■□□□ 1
LIN28AQ9H9Z2 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
LIN28AQ9H9Z2 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC21.27■■□□□ 1
LIN28AQ9H9Z2 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC21.27■■□□□ 1
LIN28AQ9H9Z2 TERT-206ENST00000508104 2486 ntTSL 5 BASIC21.27■■□□□ 1
LIN28AQ9H9Z2 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC21.27■■□□□ 1
LIN28AQ9H9Z2 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC21.27■■□□□ 1
LIN28AQ9H9Z2 TRIR-202ENST00000588213 841 ntTSL 3 BASIC21.27■■□□□ 1
LIN28AQ9H9Z2 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC21.27■■□□□ 1
LIN28AQ9H9Z2 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC21.27■■□□□ 1
LIN28AQ9H9Z2 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
LIN28AQ9H9Z2 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC21.27■■□□□ 1
LIN28AQ9H9Z2 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC21.27■■□□□ 1
LIN28AQ9H9Z2 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC21.27■■□□□ 1
LIN28AQ9H9Z2 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC21.27■□□□□ 0.99
LIN28AQ9H9Z2 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC21.27■□□□□ 0.99
LIN28AQ9H9Z2 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC21.26■□□□□ 0.99
LIN28AQ9H9Z2 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
LIN28AQ9H9Z2 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
LIN28AQ9H9Z2 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
LIN28AQ9H9Z2 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC21.26■□□□□ 0.99
LIN28AQ9H9Z2 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC21.26■□□□□ 0.99
LIN28AQ9H9Z2 MIR6722-201ENST00000617286 78 ntBASIC21.26■□□□□ 0.99
LIN28AQ9H9Z2 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC21.26■□□□□ 0.99
LIN28AQ9H9Z2 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC21.26■□□□□ 0.99
LIN28AQ9H9Z2 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC21.26■□□□□ 0.99
LIN28AQ9H9Z2 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC21.26■□□□□ 0.99
LIN28AQ9H9Z2 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC21.26■□□□□ 0.99
LIN28AQ9H9Z2 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC21.26■□□□□ 0.99
LIN28AQ9H9Z2 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
LIN28AQ9H9Z2 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC21.25■□□□□ 0.99
LIN28AQ9H9Z2 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
LIN28AQ9H9Z2 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
LIN28AQ9H9Z2 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC21.25■□□□□ 0.99
LIN28AQ9H9Z2 STK32C-205ENST00000456004 607 ntTSL 2 BASIC21.25■□□□□ 0.99
LIN28AQ9H9Z2 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC21.25■□□□□ 0.99
LIN28AQ9H9Z2 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC21.25■□□□□ 0.99
LIN28AQ9H9Z2 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
LIN28AQ9H9Z2 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC21.25■□□□□ 0.99
LIN28AQ9H9Z2 AL117332.1-201ENST00000622628 974 ntBASIC21.25■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms