Protein–RNA interactions for Protein: Q9H492

MAP1LC3A, Microtubule-associated proteins 1A/1B light chain 3A, humanhuman

Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3AQ9H492 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
MAP1LC3AQ9H492 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
MAP1LC3AQ9H492 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
MAP1LC3AQ9H492 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC16.26■□□□□ 0.19
MAP1LC3AQ9H492 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
MAP1LC3AQ9H492 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
MAP1LC3AQ9H492 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
MAP1LC3AQ9H492 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
MAP1LC3AQ9H492 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
MAP1LC3AQ9H492 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
MAP1LC3AQ9H492 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
MAP1LC3AQ9H492 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC16.25■□□□□ 0.19
MAP1LC3AQ9H492 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
MAP1LC3AQ9H492 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
MAP1LC3AQ9H492 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
MAP1LC3AQ9H492 HGH1-207ENST00000628266 258 ntTSL 5 BASIC16.25■□□□□ 0.19
MAP1LC3AQ9H492 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC16.25■□□□□ 0.19
MAP1LC3AQ9H492 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
MAP1LC3AQ9H492 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
MAP1LC3AQ9H492 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC16.25■□□□□ 0.19
MAP1LC3AQ9H492 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
MAP1LC3AQ9H492 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
MAP1LC3AQ9H492 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC16.25■□□□□ 0.19
MAP1LC3AQ9H492 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
MAP1LC3AQ9H492 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC16.25■□□□□ 0.19
MAP1LC3AQ9H492 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC16.25■□□□□ 0.19
MAP1LC3AQ9H492 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
MAP1LC3AQ9H492 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
MAP1LC3AQ9H492 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
MAP1LC3AQ9H492 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC16.25■□□□□ 0.19
MAP1LC3AQ9H492 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
MAP1LC3AQ9H492 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC16.25■□□□□ 0.19
MAP1LC3AQ9H492 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC16.24■□□□□ 0.19
MAP1LC3AQ9H492 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
MAP1LC3AQ9H492 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
MAP1LC3AQ9H492 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC16.24■□□□□ 0.19
MAP1LC3AQ9H492 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
MAP1LC3AQ9H492 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC16.24■□□□□ 0.19
MAP1LC3AQ9H492 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
MAP1LC3AQ9H492 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
MAP1LC3AQ9H492 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
MAP1LC3AQ9H492 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
MAP1LC3AQ9H492 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
MAP1LC3AQ9H492 AC138932.1-201ENST00000534164 6830 ntBASIC16.23■□□□□ 0.19
MAP1LC3AQ9H492 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
MAP1LC3AQ9H492 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
MAP1LC3AQ9H492 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC16.23■□□□□ 0.19
MAP1LC3AQ9H492 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
MAP1LC3AQ9H492 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
MAP1LC3AQ9H492 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC16.23■□□□□ 0.19
MAP1LC3AQ9H492 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC16.23■□□□□ 0.19
MAP1LC3AQ9H492 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC16.23■□□□□ 0.19
MAP1LC3AQ9H492 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC16.23■□□□□ 0.19
MAP1LC3AQ9H492 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC16.23■□□□□ 0.19
MAP1LC3AQ9H492 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
MAP1LC3AQ9H492 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
MAP1LC3AQ9H492 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
MAP1LC3AQ9H492 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
MAP1LC3AQ9H492 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC16.22■□□□□ 0.19
MAP1LC3AQ9H492 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
MAP1LC3AQ9H492 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
MAP1LC3AQ9H492 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
MAP1LC3AQ9H492 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC16.22■□□□□ 0.19
MAP1LC3AQ9H492 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC16.22■□□□□ 0.19
MAP1LC3AQ9H492 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC16.22■□□□□ 0.19
MAP1LC3AQ9H492 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC16.22■□□□□ 0.19
MAP1LC3AQ9H492 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC16.22■□□□□ 0.19
MAP1LC3AQ9H492 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
MAP1LC3AQ9H492 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
MAP1LC3AQ9H492 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
MAP1LC3AQ9H492 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
MAP1LC3AQ9H492 FBXW4P1-201ENST00000426721 2239 ntBASIC16.22■□□□□ 0.19
MAP1LC3AQ9H492 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
MAP1LC3AQ9H492 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC16.22■□□□□ 0.19
MAP1LC3AQ9H492 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
MAP1LC3AQ9H492 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
MAP1LC3AQ9H492 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
MAP1LC3AQ9H492 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
MAP1LC3AQ9H492 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC16.21■□□□□ 0.19
MAP1LC3AQ9H492 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
MAP1LC3AQ9H492 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
MAP1LC3AQ9H492 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
MAP1LC3AQ9H492 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
MAP1LC3AQ9H492 AL157400.5-201ENST00000507624 621 ntBASIC16.21■□□□□ 0.19
MAP1LC3AQ9H492 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
MAP1LC3AQ9H492 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
MAP1LC3AQ9H492 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
MAP1LC3AQ9H492 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
MAP1LC3AQ9H492 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC16.21■□□□□ 0.19
MAP1LC3AQ9H492 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
MAP1LC3AQ9H492 SMPD5-203ENST00000639008 1464 ntBASIC16.21■□□□□ 0.19
MAP1LC3AQ9H492 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
MAP1LC3AQ9H492 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC16.21■□□□□ 0.19
MAP1LC3AQ9H492 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.18
MAP1LC3AQ9H492 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
MAP1LC3AQ9H492 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.18
MAP1LC3AQ9H492 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
MAP1LC3AQ9H492 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC16.2■□□□□ 0.18
MAP1LC3AQ9H492 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
MAP1LC3AQ9H492 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC16.2■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 17.6 ms