Protein–RNA interactions for Protein: Q99990

VGLL1, Transcription cofactor vestigial-like protein 1, humanhuman

Predictions only

Length 258 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VGLL1Q99990 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
VGLL1Q99990 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
VGLL1Q99990 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
VGLL1Q99990 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
VGLL1Q99990 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
VGLL1Q99990 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC16.84■□□□□ 0.29
VGLL1Q99990 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
VGLL1Q99990 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC16.84■□□□□ 0.29
VGLL1Q99990 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC16.84■□□□□ 0.29
VGLL1Q99990 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
VGLL1Q99990 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC16.84■□□□□ 0.29
VGLL1Q99990 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC16.84■□□□□ 0.29
VGLL1Q99990 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
VGLL1Q99990 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC16.84■□□□□ 0.29
VGLL1Q99990 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC16.84■□□□□ 0.29
VGLL1Q99990 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
VGLL1Q99990 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
VGLL1Q99990 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC16.84■□□□□ 0.29
VGLL1Q99990 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
VGLL1Q99990 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
VGLL1Q99990 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
VGLL1Q99990 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
VGLL1Q99990 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
VGLL1Q99990 IDNK-201ENST00000376417 511 ntTSL 5 BASIC16.83■□□□□ 0.28
VGLL1Q99990 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
VGLL1Q99990 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC16.83■□□□□ 0.28
VGLL1Q99990 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
VGLL1Q99990 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC16.83■□□□□ 0.28
VGLL1Q99990 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC16.83■□□□□ 0.28
VGLL1Q99990 NTF6A-201ENST00000591175 560 ntBASIC16.83■□□□□ 0.28
VGLL1Q99990 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC16.83■□□□□ 0.28
VGLL1Q99990 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC16.83■□□□□ 0.28
VGLL1Q99990 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC16.83■□□□□ 0.28
VGLL1Q99990 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC16.82■□□□□ 0.28
VGLL1Q99990 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
VGLL1Q99990 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
VGLL1Q99990 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
VGLL1Q99990 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
VGLL1Q99990 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
VGLL1Q99990 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
VGLL1Q99990 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC16.82■□□□□ 0.28
VGLL1Q99990 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC16.82■□□□□ 0.28
VGLL1Q99990 MIR4281-201ENST00000580852 62 ntBASIC16.82■□□□□ 0.28
VGLL1Q99990 THA1P-201ENST00000590384 1145 ntBASIC16.82■□□□□ 0.28
VGLL1Q99990 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
VGLL1Q99990 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
VGLL1Q99990 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
VGLL1Q99990 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC16.82■□□□□ 0.28
VGLL1Q99990 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
VGLL1Q99990 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
VGLL1Q99990 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
VGLL1Q99990 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
VGLL1Q99990 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
VGLL1Q99990 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC16.81■□□□□ 0.28
VGLL1Q99990 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
VGLL1Q99990 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
VGLL1Q99990 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
VGLL1Q99990 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
VGLL1Q99990 KRT18P24-201ENST00000344739 1156 ntBASIC16.81■□□□□ 0.28
VGLL1Q99990 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
VGLL1Q99990 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC16.81■□□□□ 0.28
VGLL1Q99990 PVT1_1.1-201ENST00000615125 194 ntBASIC16.81■□□□□ 0.28
VGLL1Q99990 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
VGLL1Q99990 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
VGLL1Q99990 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
VGLL1Q99990 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
VGLL1Q99990 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC16.81■□□□□ 0.28
VGLL1Q99990 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
VGLL1Q99990 AC127496.7-201ENST00000625110 1798 ntBASIC16.81■□□□□ 0.28
VGLL1Q99990 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
VGLL1Q99990 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
VGLL1Q99990 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
VGLL1Q99990 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC16.81■□□□□ 0.28
VGLL1Q99990 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
VGLL1Q99990 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
VGLL1Q99990 ESRRAP2-201ENST00000418437 1549 ntBASIC16.8■□□□□ 0.28
VGLL1Q99990 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
VGLL1Q99990 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
VGLL1Q99990 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC16.8■□□□□ 0.28
VGLL1Q99990 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC16.8■□□□□ 0.28
VGLL1Q99990 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
VGLL1Q99990 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
VGLL1Q99990 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
VGLL1Q99990 AC004448.1-201ENST00000458332 883 ntBASIC16.8■□□□□ 0.28
VGLL1Q99990 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
VGLL1Q99990 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
VGLL1Q99990 AL353803.4-201ENST00000565882 1934 ntBASIC16.8■□□□□ 0.28
VGLL1Q99990 AC242852.2-201ENST00000615738 1807 ntBASIC16.8■□□□□ 0.28
VGLL1Q99990 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC16.79■□□□□ 0.28
VGLL1Q99990 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
VGLL1Q99990 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
VGLL1Q99990 USF2-207ENST00000595068 1612 ntTSL 5 BASIC16.79■□□□□ 0.28
VGLL1Q99990 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
VGLL1Q99990 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
VGLL1Q99990 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC16.79■□□□□ 0.28
VGLL1Q99990 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
VGLL1Q99990 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
VGLL1Q99990 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
VGLL1Q99990 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
VGLL1Q99990 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC16.79■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 20.8 ms